BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00020034
         (344 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010098692.1| Retrovirus-related Pol polyprotein from tran...   149   1e-33
ref|XP_006493538.1| PREDICTED: uncharacterized protein LOC102629...   134   3e-29
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       124   3e-26
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   124   4e-26
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   124   4e-26
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...   123   6e-26
gb|EEC76787.1| hypothetical protein OsI_14890 [Oryza sativa Indi...   121   2e-25
gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]     121   2e-25
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   121   2e-25
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   120   4e-25
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   120   4e-25
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   120   4e-25
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc...   120   4e-25
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   120   4e-25
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     120   4e-25
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   120   4e-25
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   119   7e-25
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc...   119   7e-25
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   119   7e-25
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   119   9e-25

>ref|XP_010098692.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis] gi|587886824|gb|EXB75595.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Morus notabilis]
          Length = 440

 Score =  149 bits (375), Expect = 1e-33
 Identities = 73/114 (64%), Positives = 86/114 (75%)
 Frame = -3

Query: 342 ATKSFDWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGK 163
           A+KS DWW D   TIHVCND  +F +Y  EK+GQ+VLM ++DA  V G+G VE+ FTS K
Sbjct: 159 ASKSSDWWLDSSVTIHVCNDKTMFLSYKVEKEGQTVLMRSNDAAMVAGRGVVEINFTSEK 218

Query: 162 KLLLINVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           KL L N   VP IRKNLVSAS +CKNGLK+VLE  NCI++KN  FVGKGYSCDG
Sbjct: 219 KLTLNN---VPDIRKNLVSASLMCKNGLKIVLEGNNCIVSKNGIFVGKGYSCDG 269


>ref|XP_006493538.1| PREDICTED: uncharacterized protein LOC102629831 [Citrus sinensis]
          Length = 486

 Score =  134 bits (336), Expect = 3e-29
 Identities = 61/93 (65%), Positives = 75/93 (80%)
 Frame = -3

Query: 339 TKSFDWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKK 160
           TKS+DWW D GATIHVCND   F +Y EE +GQ VLMGN++ V V GKG VE+ FTSGKK
Sbjct: 148 TKSYDWWLDSGATIHVCNDKKFFLSYKEETEGQMVLMGNNNPVIVAGKGVVEINFTSGKK 207

Query: 159 LLLINVYHVPKIRKNLVSASPLCKNGLKVVLES 61
           + L NV+HVP +RKNL+SAS +CK+GLK+VLE+
Sbjct: 208 VTLYNVFHVPSVRKNLISASCMCKHGLKIVLEA 240


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  124 bits (311), Expect = 3e-26
 Identities = 60/112 (53%), Positives = 79/112 (70%)
 Frame = -3

Query: 336 KSFDWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKL 157
           +S  WW D GA +HVC+D+ LFS+Y   +D  SVLMGN     V G G+V+L+FTSGK +
Sbjct: 258 QSPSWWLDTGANVHVCSDINLFSSYQGARDS-SVLMGNGSHASVHGTGTVDLKFTSGKIV 316

Query: 156 LLINVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
            L NV+HVP I KNLVS + LC++G KVVLES   +++K+  F+GKGY C G
Sbjct: 317 QLKNVHHVPSIHKNLVSGTLLCRDGFKVVLESNKLVVSKSGQFIGKGYDCGG 368


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  124 bits (310), Expect = 4e-26
 Identities = 59/109 (54%), Positives = 78/109 (71%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           +WW D GA IHVC D  +F++Y   + G ++LMGN     V+G G+V L+FTSGK + L 
Sbjct: 315 EWWMDSGANIHVCADASMFTSYQVGRSG-ALLMGNGSRAHVLGVGTVILKFTSGKTVPLK 373

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           +V HVP I+KNLVSAS LC++G KVVLES  C+++K+  FVGKGY C G
Sbjct: 374 SVQHVPSIKKNLVSASMLCRDGYKVVLESNKCVVSKHGTFVGKGYDCGG 422


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
           gag/pol protein [Zea mays]
          Length = 1279

 Score =  124 bits (310), Expect = 4e-26
 Identities = 59/109 (54%), Positives = 78/109 (71%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           +WW D GA IHVC D  +F++Y   + G ++LMGN     V+G G+V L+FTSGK + L 
Sbjct: 275 EWWMDSGANIHVCADASMFTSYQVGRSG-ALLMGNGSRAHVLGVGTVILKFTSGKTVPLK 333

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           +V HVP I+KNLVSAS LC++G KVVLES  C+++K+  FVGKGY C G
Sbjct: 334 SVQHVPSIKKNLVSASMLCRDGYKVVLESNKCVVSKHGTFVGKGYECGG 382


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1453

 Score =  123 bits (308), Expect = 6e-26
 Identities = 60/109 (55%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y  E+ G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 449 DWWVDTGANIHVCADISLFSSYQVER-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 507

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 508 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 556


>gb|EEC76787.1| hypothetical protein OsI_14890 [Oryza sativa Indica Group]
          Length = 330

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/109 (54%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y + + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 193 DWWVDTGANIHVCADISLFSSY-QVRRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 251

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 252 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 300


>gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1138

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/109 (54%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y + + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 264 DWWVDTGANIHVCADISLFSSY-QVRRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 322

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 323 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 371


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  121 bits (303), Expect = 2e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 409 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNESLAAVHGVGTVDLKFTSGKTVQLK 467

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 468 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 516


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1448

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 444 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 502

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 503 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 551


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1298

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 409 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 467

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 468 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 516


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 409 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 467

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 468 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 516


>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1457

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 453 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 511

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 512 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 560


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1413

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 409 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 467

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 468 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 516


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 264 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 322

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 323 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 371


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 390 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLK 448

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 449 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 497


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  119 bits (299), Expect = 7e-25
 Identities = 58/109 (53%), Positives = 75/109 (68%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 265 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAVHGVGTVDLKFTSGKIVQLK 323

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC++G ++V ES  C+++K   F+GKGY   G
Sbjct: 324 NVQHVPSIKKNLVSGSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGG 372


>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1452

 Score =  119 bits (299), Expect = 7e-25
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     V G G+V+L+FTSGK + L 
Sbjct: 452 DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAVVHGVGTVDLKFTSGKTVQLK 510

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 511 NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYETFVGKGYDSGG 559


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  119 bits (299), Expect = 7e-25
 Identities = 60/108 (55%), Positives = 72/108 (66%)
 Frame = -3

Query: 324 WWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLIN 145
           WW D  AT+HV  D  LF T+ + K  Q V MGN    KV+GKG++E+ FTSGKK+ L N
Sbjct: 307 WWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKN 366

Query: 144 VYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           V +VP + KNLVS   L K G+K V ES   ILTK+  FVGKGYSCDG
Sbjct: 367 VLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGYSCDG 414


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  119 bits (298), Expect = 9e-25
 Identities = 58/109 (53%), Positives = 73/109 (66%)
 Frame = -3

Query: 327 DWWRDYGATIHVCNDMMLFSTYAEEKDGQSVLMGNHDAVKVVGKGSVELQFTSGKKLLLI 148
           DWW D GA IHVC D+ LFS+Y   + G S+LMGN     + G G+V L+FTSGK + L 
Sbjct: 27  DWWVDTGANIHVCADISLFSSYQVGR-GSSLLMGNGSLAAIHGVGTVNLKFTSGKTVQLK 85

Query: 147 NVYHVPKIRKNLVSASPLCKNGLKVVLESENCILTKNAAFVGKGYSCDG 1
           NV HVP I+KNLVS S LC+ G ++V ES  C+++K   FVGKGY   G
Sbjct: 86  NVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGG 134