BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019981
         (600 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008225814.1| PREDICTED: cytochrome c6, chloroplastic isof...    44   4e-07
ref|XP_008225816.1| PREDICTED: cytochrome c6, chloroplastic isof...    44   4e-07
gb|ERN14909.1| hypothetical protein AMTR_s00032p00179900 [Ambore...    42   8e-07
ref|XP_010936669.1| PREDICTED: cytochrome c6, chloroplastic [Ela...    50   3e-06

>ref|XP_008225814.1| PREDICTED: cytochrome c6, chloroplastic isoform X1 [Prunus mume]
          Length = 179

 Score = 43.5 bits (101), Expect(3) = 4e-07
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 422 RNGVDTEEGIYGITYYGKGRMP 487
           RNGVDTEE IY +TY+GKGRMP
Sbjct: 112 RNGVDTEEEIYRVTYFGKGRMP 133



 Score = 33.9 bits (76), Expect(3) = 4e-07
 Identities = 21/46 (45%), Positives = 23/46 (50%)
 Frame = +1

Query: 169 CSTXGGNILQPVSLNNSLTPFVIIASIFLTTAFFQGATLFMKDLQR 306
           C   GGNI+QPVSL+ S                  GATLF KDLQR
Sbjct: 85  CHDAGGNIIQPVSLHLS------------------GATLFTKDLQR 112



 Score = 23.1 bits (48), Expect(3) = 4e-07
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 568 GSLQGFGEKCT 600
           G + GFGEKCT
Sbjct: 130 GRMPGFGEKCT 140


>ref|XP_008225816.1| PREDICTED: cytochrome c6, chloroplastic isoform X3 [Prunus mume]
          Length = 132

 Score = 43.5 bits (101), Expect(3) = 4e-07
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 422 RNGVDTEEGIYGITYYGKGRMP 487
           RNGVDTEE IY +TY+GKGRMP
Sbjct: 65  RNGVDTEEEIYRVTYFGKGRMP 86



 Score = 33.9 bits (76), Expect(3) = 4e-07
 Identities = 21/46 (45%), Positives = 23/46 (50%)
 Frame = +1

Query: 169 CSTXGGNILQPVSLNNSLTPFVIIASIFLTTAFFQGATLFMKDLQR 306
           C   GGNI+QPVSL+ S                  GATLF KDLQR
Sbjct: 38  CHDAGGNIIQPVSLHLS------------------GATLFTKDLQR 65



 Score = 23.1 bits (48), Expect(3) = 4e-07
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 568 GSLQGFGEKCT 600
           G + GFGEKCT
Sbjct: 83  GRMPGFGEKCT 93


>gb|ERN14909.1| hypothetical protein AMTR_s00032p00179900 [Amborella trichopoda]
          Length = 200

 Score = 41.6 bits (96), Expect(2) = 8e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 422 RNGVDTEEGIYGITYYGKGRMP 487
           RNGV TE+ IY +TYYGKGRMP
Sbjct: 134 RNGVATEDDIYNLTYYGKGRMP 155



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +1

Query: 169 CSTXGGNILQPVSLNNSLTPFVIIASIFLTTA-------FFQGATLFMKDLQR 306
           C   GGN LQPVS       F++   + +           FQGATLF KDLQR
Sbjct: 82  CHDGGGNFLQPVSSYTPQCNFILFLELSMLLYCCSSLMWLFQGATLFTKDLQR 134


>ref|XP_010936669.1| PREDICTED: cytochrome c6, chloroplastic [Elaeis guineensis]
          Length = 150

 Score = 50.1 bits (118), Expect(2) = 3e-06
 Identities = 25/44 (56%), Positives = 28/44 (63%)
 Frame = +2

Query: 422 RNGVDTEEGIYGITYYGKGRMPASPPIFCYLQLKMFSMDAAHLW 553
           RNGV TEEGIY ITYYGKGRMPA          +M S  + H+W
Sbjct: 107 RNGVATEEGIYNITYYGKGRMPAR------FWREMHSKGSMHIW 144



 Score = 28.1 bits (61), Expect(2) = 3e-06
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = +1

Query: 169 CSTXGGNILQPVSLNNSLTPFVIIASIFLTTAFFQGATLFMKDLQR 306
           C   GGNILQP                        GATLFMKDL+R
Sbjct: 86  CHDMGGNILQP------------------------GATLFMKDLER 107