BLASTX nr result
ID: Cinnamomum24_contig00019918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00019918
(596 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011629038.1| PREDICTED: pentatricopeptide repeat-containi... 183 5e-44
ref|XP_010909083.1| PREDICTED: putative pentatricopeptide repeat... 168 2e-39
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 161 3e-37
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 161 3e-37
ref|XP_010256585.1| PREDICTED: pentatricopeptide repeat-containi... 160 4e-37
ref|XP_002314110.1| pentatricopeptide repeat-containing family p... 155 2e-35
ref|XP_011032289.1| PREDICTED: pentatricopeptide repeat-containi... 154 3e-35
gb|KDO44240.1| hypothetical protein CISIN_1g035659mg [Citrus sin... 152 1e-34
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 152 1e-34
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr... 152 1e-34
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,... 151 3e-34
ref|XP_011624582.1| PREDICTED: pentatricopeptide repeat-containi... 150 5e-34
ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containi... 150 6e-34
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi... 150 6e-34
ref|XP_010248664.1| PREDICTED: pentatricopeptide repeat-containi... 149 8e-34
ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containi... 149 1e-33
ref|XP_008794509.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 148 2e-33
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr... 148 2e-33
ref|XP_011620813.1| PREDICTED: pentatricopeptide repeat-containi... 148 2e-33
ref|XP_011627771.1| PREDICTED: pentatricopeptide repeat-containi... 147 3e-33
>ref|XP_011629038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Amborella trichopoda]
Length = 589
Score = 183 bits (465), Expect = 5e-44
Identities = 98/201 (48%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Frame = -2
Query: 595 AHMIKT---QHQRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
AH++KT Q SKL+ LSP G M YA + I+ PD FT+NTMIRGY + A
Sbjct: 35 AHLLKTGQAQSTYPASKLIQFCALSPSGSMAYAQRLLPAIESPDTFTFNTMIRGYTKTGA 94
Query: 424 PHQSLLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTA 245
P Q+LL F M+E PN +TFPFVLKACAH+ + G+S+HA ++K G +D+HI TA
Sbjct: 95 PKQALLFFVYMIEIAHPPNTHTFPFVLKACAHVEELKLGQSLHAHVVKLGFLADMHIQTA 154
Query: 244 LISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGE 65
L+S Y+VC D EAA +VF + + T VA WN++ISG+VK K A E D+MLQ+ E
Sbjct: 155 LVSLYSVCSDLEAAQRVFDRITHRT--VASWNSMISGYVKGNLPKRAFEACDEMLQVAAE 212
Query: 64 EVRADGITIVSVLSACADLGA 2
D +T+ S+L ACAD GA
Sbjct: 213 ---PDEVTVASLLCACADTGA 230
Score = 98.6 bits (244), Expect = 2e-18
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 2/199 (1%)
Frame = -2
Query: 595 AHMIKTQH--QRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAP 422
AH++K H+ L S+ S ++ A +F RI + +WN+MI GY++ + P
Sbjct: 138 AHVVKLGFLADMHIQTALVSL-YSVCSDLEAAQRVFDRITHRTVASWNSMISGYVKGNLP 196
Query: 421 HQSLLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTAL 242
++ +ML+ P+ T +L ACA ++ GR +H + K G+ D + TAL
Sbjct: 197 KRAFEACDEMLQVAAEPDEVTVASLLCACADTGALGLGRWLHDYIAKKGIKLDAIVGTAL 256
Query: 241 ISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEE 62
I YA CG E A +VF +V W A++ G + +L F QML E +
Sbjct: 257 IDMYAKCGSIERAEEVF--GIMHEKNVLTWTAMMWGLAMCDRGESSLGFFYQML--ETTD 312
Query: 61 VRADGITIVSVLSACADLG 5
++ D +T V+VLSAC+ G
Sbjct: 313 IKPDAVTFVTVLSACSHTG 331
>ref|XP_010909083.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405 [Elaeis guineensis]
Length = 518
Score = 168 bits (426), Expect = 2e-39
Identities = 96/204 (47%), Positives = 127/204 (62%), Gaps = 6/204 (2%)
Frame = -2
Query: 595 AHMIKTQHQRH--VSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAP 422
A MIKTQH R ++ L + C S MDYALS+F+ P +F N++I GY++ S+P
Sbjct: 26 AQMIKTQHDRSSFLAGKLVAFC-SHRNLMDYALSVFAHTPSPGLFARNSIIHGYLQASSP 84
Query: 421 HQSLLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTAL 242
H +LL FA P PN++TFP + KACAHL + G+++H LLK G SDLH TAL
Sbjct: 85 HLALLFFASRPALP--PNSHTFPLLFKACAHLHDLLLGKALHGHLLKIGFHSDLHAHTAL 142
Query: 241 ISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEE 62
+ YA CG +A ++F P+ +A WNA+ISG VK G SK ALELF ++L +E
Sbjct: 143 LYLYASCGQVISARKLFAVSPH-GDCIACWNAIISGLVKGGRSKEALELFYELLGMECRH 201
Query: 61 ----VRADGITIVSVLSACADLGA 2
+ AD ITIVS L+AC DLGA
Sbjct: 202 RETPLEADEITIVSALAACTDLGA 225
Score = 77.8 bits (190), Expect = 4e-12
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Frame = -2
Query: 481 GPDIFTWNTMIRGYIRISAPHQSLLLFAQML-------ESPVFPNAYTFPFVLKACAHLS 323
G I WN +I G ++ ++L LF ++L E+P+ + T L AC L
Sbjct: 165 GDCIACWNAIISGLVKGGRSKEALELFYELLGMECRHRETPLEADEITIVSALAACTDLG 224
Query: 322 SIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAV 143
++ + +H LK+ + ++ + TAL+ YA CG + A +VF + P +V W +
Sbjct: 225 ALDSAKWIHEYALKNEVRVNVCVGTALVDAYAKCGSVDLARRVFDEMP--ERNVMSWTVM 282
Query: 142 ISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSAC 17
I G G + AL LF +M+ G D +T V LSAC
Sbjct: 283 IRGLAMFGQGREALALFSKMVSEGG---APDDVTFVGALSAC 321
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 743
Score = 161 bits (407), Expect = 3e-37
Identities = 83/183 (45%), Positives = 121/183 (66%), Gaps = 1/183 (0%)
Frame = -2
Query: 559 SKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQML-ES 383
S+L+T+ LSP +DYA +F +I P+++TWNT+IR Y S PHQSLL+F +ML +S
Sbjct: 71 SRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQS 130
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
P FP+ +TFPF++KA + L + G++ H ++K L SD+ I +LI FYA CG+
Sbjct: 131 PDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLG 190
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLS 23
++VFV P V WN++I+ FV+ G + ALELF +M E + V+ +GIT+V VLS
Sbjct: 191 YRVFVNIP--RRDVVSWNSMITAFVQGGCPEEALELFQEM---ETQNVKPNGITMVGVLS 245
Query: 22 ACA 14
ACA
Sbjct: 246 ACA 248
Score = 105 bits (261), Expect = 2e-20
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 29/203 (14%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G + +F I D+ +WN+MI +++ P ++L LF +M V PN T VL
Sbjct: 185 GELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVL 244
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCP----- 179
ACA S GR VH+ + ++ + L +S A++ Y CG E A ++F K P
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304
Query: 178 -YTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+TT +A WNA+IS + + G K ALELF + LQ+
Sbjct: 305 SWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHE-LQL- 362
Query: 70 GEEVRADGITIVSVLSACADLGA 2
+ + D +T+VS LSACA LGA
Sbjct: 363 SKTAKPDEVTLVSTLSACAQLGA 385
Score = 102 bits (255), Expect = 1e-19
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPF 350
+G D A IF + DI WN +I Y + P ++L LF ++ L P+ T
Sbjct: 316 IGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVS 375
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
L ACA L ++ G +H + K G+ + H++T+LI Y CGD + A VF
Sbjct: 376 TLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHS--VER 433
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+A+I+G GH K A+ LF +M + ++V+ + +T ++L AC+ +G
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKM---QEDKVKPNAVTFTNILCACSHVG 485
Score = 65.5 bits (158), Expect = 2e-08
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
Frame = -2
Query: 586 IKTQHQRHVSKLLTSIC--LSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQS 413
IK Q + L TS+ G + AL +F ++ D+F W+ MI G +
Sbjct: 396 IKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDA 455
Query: 412 LLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQL-LKHGLSSDLHISTALIS 236
+ LF++M E V PNA TF +L AC+H+ + GR+ Q+ L +G+ + ++
Sbjct: 456 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 515
Query: 235 FYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
G E A ++ K P + ++W A++ + A + Q++++E
Sbjct: 516 ILGRAGLLEEAVELIEKMP-MAPAASVWGALLGACTIHENVVLAEQACSQLIELE 569
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 161 bits (407), Expect = 3e-37
Identities = 83/183 (45%), Positives = 121/183 (66%), Gaps = 1/183 (0%)
Frame = -2
Query: 559 SKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQML-ES 383
S+L+T+ LSP +DYA +F +I P+++TWNT+IR Y S PHQSLL+F +ML +S
Sbjct: 71 SRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQS 130
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
P FP+ +TFPF++KA + L + G++ H ++K L SD+ I +LI FYA CG+
Sbjct: 131 PDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLG 190
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLS 23
++VFV P V WN++I+ FV+ G + ALELF +M E + V+ +GIT+V VLS
Sbjct: 191 YRVFVNXP--RRDVVSWNSMITAFVQGGCPEEALELFQEM---ETQNVKPNGITMVGVLS 245
Query: 22 ACA 14
ACA
Sbjct: 246 ACA 248
Score = 94.4 bits (233), Expect = 4e-17
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G + +F D+ +WN+MI +++ P ++L LF +M V PN T VL
Sbjct: 185 GELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVL 244
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTS 164
ACA S GR VH+ + ++ + L +S A++ Y CG E A ++F K P
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMP--EKD 302
Query: 163 VALWNAVISGFVK------------SGHSKHALELFDQMLQIEGEEVRADGITIVSVLSA 20
+ W ++ G+ K GH K A+ LF +M + ++V+ + +T ++L A
Sbjct: 303 IVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKM---QEDKVKPNAVTFTNILCA 359
Query: 19 CADLG 5
C+ +G
Sbjct: 360 CSHVG 364
Score = 59.7 bits (143), Expect = 1e-06
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRIS--------APH----QSLLLFAQMLESP 380
G ++ A +F ++ DI +W TM+ GY +I A H ++ LF++M E
Sbjct: 286 GSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDK 345
Query: 379 VFPNAYTFPFVLKACAHLSSIHRGRSVHAQL-LKHGLSSDLHISTALISFYAVCGDPEAA 203
V PNA TF +L AC+H+ + GR+ Q+ L +G+ + ++ G E A
Sbjct: 346 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEA 405
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
++ K P + ++W A++ + A + Q++++E
Sbjct: 406 VELIEKMP-MAPAASVWGALLGACTIHENVVLAEQACSQLIELE 448
>ref|XP_010256585.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Nelumbo nucifera]
Length = 742
Score = 160 bits (406), Expect = 4e-37
Identities = 84/198 (42%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Frame = -2
Query: 595 AHMIKTQ---HQRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
A M++T H S+L+T LSP ++YA +F +I P+++TWNT+IR Y
Sbjct: 55 AQMLRTGAFFHPYSASRLITMCTLSPFASLEYARRVFDQISQPNVYTWNTLIRAYASGPE 114
Query: 424 PHQSLLLFAQML-ESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHIST 248
PH++LL+F +ML + P PN +TFPF +KA + LS+ GR+ H ++K L+SD++I
Sbjct: 115 PHRALLIFCKMLHQCPDPPNKFTFPFGIKATSELSASREGRAFHGMVVKASLASDVYILN 174
Query: 247 ALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEG 68
+L+ FYA CGD + A+QVFV P V WN++I+ F ++ K ALELF M E
Sbjct: 175 SLVHFYAACGDLDQAYQVFVNIP--NRDVVSWNSMITAFAQANRPKEALELFRMM---EM 229
Query: 67 EEVRADGITIVSVLSACA 14
E+++ + +T+VSVLSACA
Sbjct: 230 EKIKPNDVTMVSVLSACA 247
Score = 97.1 bits (240), Expect = 6e-18
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G +D A +F I D+ +WN+MI + + + P ++L LF M + PN T VL
Sbjct: 184 GDLDQAYQVFVNIPNRDVVSWNSMITAFAQANRPKEALELFRMMEMEKIKPNDVTMVSVL 243
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCP----- 179
ACA + G VH+ + ++ + DL +S A++ Y CG A ++F P
Sbjct: 244 SACAKNLDLEFGTWVHSYIERNEIDMDLILSNAMLDMYTKCGSLGEAKRLFDMMPEKDSF 303
Query: 178 -YTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+TT +A WNA+IS + +SG ++ AL LF + LQ+
Sbjct: 304 SWTTMITGYAKSGEFDAARCFFDAMPARDIAAWNALISAYEQSGQAREALSLFHE-LQL- 361
Query: 70 GEEVRADGITIVSVLSACADLG 5
D T VSVLSACA+LG
Sbjct: 362 SSSATPDQFTHVSVLSACAELG 383
Score = 96.3 bits (238), Expect = 1e-17
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPFV 347
G D A F + DI WN +I Y + ++L LF ++ L S P+ +T V
Sbjct: 316 GEFDAARCFFDAMPARDIAAWNALISAYEQSGQAREALSLFHELQLSSSATPDQFTHVSV 375
Query: 346 LKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
L ACA L +++ G +H + K G+ + H++T+LI Y+ CGD + A +VF
Sbjct: 376 LSACAELGTMNLGSWIHIYINKQGIKLNCHLATSLIDMYSKCGDLDKALEVFQS--MGKK 433
Query: 166 SVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+++I+G G + A+ LF QM + V+ + IT +VL AC+ G
Sbjct: 434 DVYVWSSMIAGLAMHGRGRDAIHLFFQM---QEAMVKPNAITFTNVLCACSHAG 484
Score = 68.6 bits (166), Expect = 2e-09
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Frame = -2
Query: 532 SPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFP 353
S G +D AL +F + D++ W++MI G ++ LF QM E+ V PNA TF
Sbjct: 415 SKCGDLDKALEVFQSMGKKDVYVWSSMIAGLAMHGRGRDAIHLFFQMQEAMVKPNAITFT 474
Query: 352 FVLKACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPY 176
VL AC+H + G+ Q+L +G++ ++ ++ G + A Q P
Sbjct: 475 NVLCACSHAGLVEEGKLYFDQMLAVYGITPEIKHYGCMVDILGRAGLLDEAVQFIQNMP- 533
Query: 175 TTTSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
++W A++S G+ + A +Q+L++E
Sbjct: 534 IVPGASVWGALLSACRTHGNVELAEYACNQLLELE 568
>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222850518|gb|EEE88065.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 738
Score = 155 bits (391), Expect = 2e-35
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 4/198 (2%)
Frame = -2
Query: 595 AHMIKTQ---HQRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
AHM++T +KL T+ LS +DYA +F +I P+++TWNT+IR +
Sbjct: 51 AHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPK 110
Query: 424 PHQSLLLFAQML-ESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHIST 248
P Q LL+F QML ES FPN+YTFPFV+KA +SS+ G+++H ++K SDL IS
Sbjct: 111 PIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISN 170
Query: 247 ALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEG 68
+LI FY+ GD ++A+ VF K + WN++ISGFV+ G + AL+LF +M +
Sbjct: 171 SLIHFYSSLGDLDSAYLVFSK--IVEKDIVSWNSMISGFVQGGSPEEALQLFKRM---KM 225
Query: 67 EEVRADGITIVSVLSACA 14
E R + +T+V VLSACA
Sbjct: 226 ENARPNRVTMVGVLSACA 243
Score = 100 bits (248), Expect = 7e-19
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPF 350
VG D A +F + DI WN +I Y + P ++L +F ++ L PN T
Sbjct: 311 VGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAS 370
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
L ACA L ++ G +H + K G+ + HI+T+LI Y+ CG E A +VF
Sbjct: 371 TLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYS--VER 428
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+A+I+G GH + A++LF +M + +V+ + +T ++L AC+ G
Sbjct: 429 RDVFVWSAMIAGLAMHGHGRAAIDLFSKM---QETKVKPNAVTFTNLLCACSHSG 480
Score = 96.3 bits (238), Expect = 1e-17
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 29/206 (14%)
Frame = -2
Query: 532 SPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFP 353
S +G +D A +FS+I DI +WN+MI G+++ +P ++L LF +M PN T
Sbjct: 177 SSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMV 236
Query: 352 FVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVK---- 185
VL ACA + GR + ++G+ +L +S A++ Y CG E A ++F K
Sbjct: 237 GVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK 296
Query: 184 --CPYTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQML 80
+TT + WNA+IS + ++G K AL +F + L
Sbjct: 297 DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRE-L 355
Query: 79 QIEGEEVRADGITIVSVLSACADLGA 2
Q+ + + + +T+ S L+ACA LGA
Sbjct: 356 QL-NKNTKPNEVTLASTLAACAQLGA 380
Score = 58.5 bits (140), Expect = 2e-06
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = -2
Query: 532 SPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFP 353
S G ++ AL +F ++ D+F W+ MI G ++ LF++M E+ V PNA TF
Sbjct: 411 SKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFT 470
Query: 352 FVLKACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPY 176
+L AC+H + GR Q+ +G+ ++ G E A ++ K P
Sbjct: 471 NLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMP- 529
Query: 175 TTTSVALWNAVI 140
S ++W A++
Sbjct: 530 IVPSASVWGALL 541
>ref|XP_011032289.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Populus euphratica]
Length = 1165
Score = 154 bits (390), Expect = 3e-35
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 4/198 (2%)
Frame = -2
Query: 595 AHMIKTQ---HQRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
AHM++T +KL T+ LS +DYA +F +I P+++TWNT+IR +
Sbjct: 51 AHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPQPNLYTWNTLIRAFASSPK 110
Query: 424 PHQSLLLFAQML-ESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHIST 248
P Q LL+F QML ES FPN+YTFPFV+KA +SS+ G+++H ++K SDL IS
Sbjct: 111 PIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGKAIHGMVMKASFGSDLFISN 170
Query: 247 ALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEG 68
+LI FY+ GD ++A+ VF K + WN++ISGFV+ G + AL+LF +M +
Sbjct: 171 SLIHFYSSSGDLDSAYLVFSK--IVEKDIVSWNSMISGFVQGGCPEEALQLFKRM---KM 225
Query: 67 EEVRADGITIVSVLSACA 14
E R + +T+V VLSACA
Sbjct: 226 ENARPNRVTMVGVLSACA 243
Score = 96.7 bits (239), Expect = 8e-18
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPF 350
VG A +F + DI WN +I Y + P ++L +F ++ L PN T
Sbjct: 311 VGDYGAARKVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAS 370
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
L ACA L ++ G +H + K G+ + H++T+LI Y+ CG E A +VF
Sbjct: 371 TLAACAQLGAMDLGGWIHVYIKKQGIKLNFHLTTSLIDMYSKCGHLEKALEVFYS--VER 428
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+A+I+G GH + A++LF +M + +V+ + +T ++L AC+ G
Sbjct: 429 GDVFVWSAMIAGLAMHGHGRAAIDLFSKM---QETKVKPNAVTFTNLLCACSHSG 480
Score = 95.5 bits (236), Expect = 2e-17
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Frame = -2
Query: 532 SPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFP 353
S G +D A +FS+I DI +WN+MI G+++ P ++L LF +M PN T
Sbjct: 177 SSSGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGCPEEALQLFKRMKMENARPNRVTMV 236
Query: 352 FVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVK---- 185
VL ACA + GR + K+G+ +L +S A++ Y CG E A ++F K
Sbjct: 237 GVLSACAKKIDLDFGRWACDYIEKNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK 296
Query: 184 --CPYTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQML 80
+TT + WNA+IS + ++G K AL +F + L
Sbjct: 297 DIVSWTTMIDGYAKVGDYGAARKVFDVMPREDITAWNALISSYQQNGKPKEALAIFRE-L 355
Query: 79 QIEGEEVRADGITIVSVLSACADLGA 2
Q+ + + + +T+ S L+ACA LGA
Sbjct: 356 QL-NKNTKPNEVTLASTLAACAQLGA 380
>gb|KDO44240.1| hypothetical protein CISIN_1g035659mg [Citrus sinensis]
Length = 655
Score = 152 bits (385), Expect = 1e-34
Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 1/183 (0%)
Frame = -2
Query: 559 SKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQML-ES 383
SKL T L ++YA +F +I P+++TWNT+IR Y + P QS ++F Q++ S
Sbjct: 74 SKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNS 133
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
P FPN +TFPFV+KA A L G+++H ++K DL IS +LI FYA+CGD A
Sbjct: 134 PYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMA 193
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLS 23
+ VFV V WN++ISGFV+ G + A+EL+ +M E E V+ D +T+V+VLS
Sbjct: 194 YCVFVM--IGKKDVVSWNSMISGFVQGGFFEKAIELYREM---EMENVKPDEVTMVAVLS 248
Query: 22 ACA 14
ACA
Sbjct: 249 ACA 251
Score = 87.0 bits (214), Expect = 7e-15
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 44/217 (20%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIR-----------------------------I 431
G + A +F I D+ +WN+MI G+++ +
Sbjct: 188 GDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVL 247
Query: 430 SA------------PHQSLLLFAQM-LESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQ 290
SA P+++L +F ++ L V P+ +TF VL ACA L ++ G +HA+
Sbjct: 248 SACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAK 307
Query: 289 LLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTS--VALWNAVISGFVKSGH 116
+ K G+ + +++T+LI Y CG+ + A +VF +T S V +W+ +I+GF G
Sbjct: 308 MKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVF----HTVKSRDVFVWSTMIAGFAMYGC 363
Query: 115 SKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
+ AL+LF +M + +V+ + +T +VL AC+ G
Sbjct: 364 GREALDLFSRM---QEAKVKPNAVTFTNVLCACSHSG 397
Score = 67.0 bits (162), Expect = 7e-09
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G +D AL +F + D+F W+TMI G+ ++L LF++M E+ V PNA TF VL
Sbjct: 331 GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVL 390
Query: 343 KACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
AC+H + GR Q+ +G+ + T ++ G + A + K P
Sbjct: 391 CACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMP-IVP 449
Query: 166 SVALWNAVISGFVKSGHSKHALELFDQMLQIEGE 65
++W A++ + + A +L++E E
Sbjct: 450 GASVWGALLGACKIHENVELAEYACSHLLELEPE 483
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 152 bits (385), Expect = 1e-34
Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 1/183 (0%)
Frame = -2
Query: 559 SKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQML-ES 383
SKL T L ++YA +F +I P+++TWNT+IR Y + P QS ++F Q++ S
Sbjct: 75 SKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNS 134
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
P FPN +TFPFV+KA A L G+++H ++K DL IS +LI FYA+CGD A
Sbjct: 135 PYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMA 194
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLS 23
+ VFV V WN++ISGFV+ G + A+EL+ +M E E V+ D +T+V+VLS
Sbjct: 195 YCVFVM--IGKKDVVSWNSMISGFVQGGFFEKAIELYREM---EMENVKPDEVTMVAVLS 249
Query: 22 ACA 14
ACA
Sbjct: 250 ACA 252
Score = 108 bits (269), Expect = 3e-21
Identities = 58/176 (32%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFV 347
+G D A+S+ + + I TWN +I Y + P+++L +F + L V P+ +TF V
Sbjct: 320 LGEFDAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVNPDEFTFVSV 379
Query: 346 LKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
L ACA L ++ G +HA++ K G+ + +++T+LI Y CG+ + A +VF +T
Sbjct: 380 LSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVF----HTVK 435
Query: 166 S--VALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
S V +W+ +I+GF G + AL+LF +M + +V+ + +T +VL AC+ G
Sbjct: 436 SRDVFVWSTMIAGFAMYGRGRDALDLFSRM---QEAKVKPNAVTFTNVLCACSHSG 488
Score = 94.0 bits (232), Expect = 5e-17
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G + A +F I D+ +WN+MI G+++ +++ L+ +M V P+ T VL
Sbjct: 189 GDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVL 248
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVK------C 182
ACA + GR V + + K+G+ DL +S A++ Y CG E A +F K
Sbjct: 249 SACAKKRDLEFGRWVCSYIEKNGIKMDLTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIV 308
Query: 181 PYTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+TT +A WNA+IS + ++G AL +F + L
Sbjct: 309 SWTTMIDGYAKLGEFDAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQL--- 365
Query: 70 GEEVRADGITIVSVLSACADLGA 2
+ V D T VSVLSACA LGA
Sbjct: 366 SKNVNPDEFTFVSVLSACAQLGA 388
Score = 65.9 bits (159), Expect = 2e-08
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G +D AL +F + D+F W+TMI G+ +L LF++M E+ V PNA TF VL
Sbjct: 422 GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVL 481
Query: 343 KACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
AC+H + GR Q+ +G+ + T ++ G + A + K P
Sbjct: 482 CACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMP-IVP 540
Query: 166 SVALWNAVISGFVKSGHSKHALELFDQMLQIEGE 65
++W A++ + + A +L++E E
Sbjct: 541 GASVWGALLGACKIHENVELAEYACSHLLELEPE 574
>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
gi|557530863|gb|ESR42046.1| hypothetical protein
CICLE_v10011151mg [Citrus clementina]
Length = 737
Score = 152 bits (385), Expect = 1e-34
Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 1/183 (0%)
Frame = -2
Query: 559 SKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQML-ES 383
SKL T L ++YA +F +I P+++TWNT+IR Y + P QS ++F Q++ S
Sbjct: 66 SKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNS 125
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
P FPN +TFPFV+KA A L G+++H ++K DL IS +LI FYA+CGD A
Sbjct: 126 PYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMA 185
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLS 23
+ VFV V WN++ISGFV+ G + A+EL+ +M E E V+ D +T+V+VLS
Sbjct: 186 YCVFVM--IGKKDVVSWNSMISGFVQGGFFEKAIELYREM---EMENVKPDEVTMVAVLS 240
Query: 22 ACA 14
ACA
Sbjct: 241 ACA 243
Score = 108 bits (269), Expect = 3e-21
Identities = 58/176 (32%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFV 347
+G D A+S+ + + I TWN +I Y + P+++L +F + L V P+ +TF V
Sbjct: 311 LGEFDAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVNPDEFTFVSV 370
Query: 346 LKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
L ACA L ++ G +HA++ K G+ + +++T+LI Y CG+ + A +VF +T
Sbjct: 371 LSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVF----HTVK 426
Query: 166 S--VALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
S V +W+ +I+GF G + AL+LF +M + +V+ + +T +VL AC+ G
Sbjct: 427 SRDVFVWSTMIAGFAMYGRGRDALDLFSRM---QEAKVKPNAVTFTNVLCACSHSG 479
Score = 94.0 bits (232), Expect = 5e-17
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G + A +F I D+ +WN+MI G+++ +++ L+ +M V P+ T VL
Sbjct: 180 GDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVL 239
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVK------C 182
ACA + GR V + + K+G+ DL +S A++ Y CG E A +F K
Sbjct: 240 SACAKKRDLEFGRWVCSYIEKNGIKMDLTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIV 299
Query: 181 PYTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+TT +A WNA+IS + ++G AL +F + L
Sbjct: 300 SWTTMIDGYAKLGEFDAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQL--- 356
Query: 70 GEEVRADGITIVSVLSACADLGA 2
+ V D T VSVLSACA LGA
Sbjct: 357 SKNVNPDEFTFVSVLSACAQLGA 379
Score = 64.3 bits (155), Expect = 5e-08
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G +D AL +F + D+F W+TMI G+ +L LF++M E+ V PNA TF VL
Sbjct: 413 GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVL 472
Query: 343 KACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
AC+H + GR Q+ +G + T ++ G A + K P
Sbjct: 473 CACSHSGLVDEGRMFFNQMEPVYGAVPGVKHYTCMVDMLGRAGLLNEAVEFIEKMP-IVP 531
Query: 166 SVALWNAVISGFVKSGHSKHALELFDQMLQIEGE 65
++W A++ + + A +L++E E
Sbjct: 532 GASVWGALLGACKIHENVELAEYACSHLLELEPE 565
>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 765
Score = 151 bits (381), Expect = 3e-34
Identities = 83/188 (44%), Positives = 114/188 (60%), Gaps = 1/188 (0%)
Frame = -2
Query: 574 HQRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQ 395
H + SKL + LS +DYA +F I P+++TWNT+IR + P SLL+F +
Sbjct: 62 HPYNASKLFSVAALSSFSSLDYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIR 121
Query: 394 ML-ESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCG 218
ML +SP FPN +TFPFV+KA A ++S+ +++H +K L SDL I +LI YA CG
Sbjct: 122 MLYDSPDFPNKFTFPFVIKAAAGVASLPFSQAIHGMAIKASLGSDLFILNSLIHCYASCG 181
Query: 217 DPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITI 38
D ++A+ VFVK V WN++I GFV G ALELF M + E VR + +T+
Sbjct: 182 DLDSAYSVFVK--IEEKDVVSWNSMIKGFVLGGCPDKALELFQLM---KAENVRPNDVTM 236
Query: 37 VSVLSACA 14
V VLSACA
Sbjct: 237 VGVLSACA 244
Score = 100 bits (248), Expect = 7e-19
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 29/208 (13%)
Frame = -2
Query: 538 CLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYT 359
C + G +D A S+F +I+ D+ +WN+MI+G++ P ++L LF M V PN T
Sbjct: 176 CYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVT 235
Query: 358 FPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKC- 182
VL ACA + GR V + ++G++ +L +S A++ Y G E A ++F K
Sbjct: 236 MVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTVSNAMLDMYVKNGSLEDARRLFDKME 295
Query: 181 -----PYTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQ 86
+TT ++ WN +IS + + G K AL +F +
Sbjct: 296 EKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHE 355
Query: 85 MLQIEGEEVRADGITIVSVLSACADLGA 2
LQ+ + + D +T+VS LSACA LGA
Sbjct: 356 -LQL-SKTAKPDEVTLVSTLSACAQLGA 381
Score = 92.8 bits (229), Expect = 1e-16
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Frame = -2
Query: 514 DYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPFVLKA 338
D A S+F + DI WN +I Y + P ++L +F ++ L P+ T L A
Sbjct: 316 DAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSA 375
Query: 337 CAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTSVA 158
CA L +I G +H + K + + H++T+LI Y+ CG+ E A +F V
Sbjct: 376 CAQLGAIDIGGWIHVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYS--VDRRDVF 433
Query: 157 LWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
+W+A+I+G G + A++LF +M + +VR + +T ++L AC+ G
Sbjct: 434 VWSAMIAGLAMHGRGRAAIDLFFEM---QETKVRPNAVTFTNLLCACSHTG 481
Score = 58.5 bits (140), Expect = 2e-06
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = -2
Query: 586 IKTQHQRHVSKLLTSIC--LSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQS 413
IK Q + L TS+ S G ++ AL IF +D D+F W+ MI G +
Sbjct: 392 IKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRAA 451
Query: 412 LLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQL 287
+ LF +M E+ V PNA TF +L AC+H ++ GR Q+
Sbjct: 452 IDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGRMFFNQM 493
>ref|XP_011624582.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Amborella trichopoda]
Length = 484
Score = 150 bits (379), Expect = 5e-34
Identities = 77/188 (40%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Frame = -2
Query: 562 VSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLES 383
VS+++ LS G +DYA IF+ I P+I+ WNT+IRGY++ S P ++ L+ ++L
Sbjct: 13 VSRVIAFCALSNYGSLDYARRIFALIKSPNIYIWNTIIRGYVQSSNPSEAFALYKKLLSK 72
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGL-SSDLHISTALISFYAVCGDPEA 206
+ PN YTFPF+LKAC L ++ G S+HA +K+G SD I TAL+ YA CG +
Sbjct: 73 GLIPNNYTFPFLLKACTQLVYLNIGSSIHASTIKYGFEDSDAFIQTALVHLYASCGFIDL 132
Query: 205 AHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVL 26
A ++F +C V WNA++ G+V SG + A+ LF ML+ V+ D +T+++VL
Sbjct: 133 ARKMFDRC--DERDVTSWNALMKGYVHSGRHREAISLFQTMLR-RASWVKPDEVTMLAVL 189
Query: 25 SACADLGA 2
+AC GA
Sbjct: 190 TACGHSGA 197
Score = 103 bits (256), Expect = 9e-20
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLE--SPVFPNAYTFPF 350
G +D A +F R D D+ +WN +++GY+ +++ LF ML S V P+ T
Sbjct: 128 GFIDLARKMFDRCDERDVTSWNALMKGYVHSGRHREAISLFQTMLRRASWVKPDEVTMLA 187
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
VL AC H ++ RG VH + + L + + TAL+ YA CG E A ++F
Sbjct: 188 VLTACGHSGALDRGSWVHRYMEANKLKRTIRLETALVDMYAKCGSIETARRLFDAT--VE 245
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
LW+ +I G G +K AL LF +M ++ G V D +T SVLSAC+ G
Sbjct: 246 RDGHLWSVMIGGLAMHGMAKEALSLFSEMQRVGG--VVPDSVTFTSVLSACSHAG 298
>ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Glycine max]
gi|947123433|gb|KRH71639.1| hypothetical protein
GLYMA_02G160400 [Glycine max]
Length = 695
Score = 150 bits (378), Expect = 6e-34
Identities = 86/198 (43%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Frame = -2
Query: 595 AHMIKTQH---QRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
AHM++T SKLLT+ +S + YA ++F++I P+++ WNT+IRGY S
Sbjct: 8 AHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSD 67
Query: 424 PHQSLLLFAQMLES-PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHIST 248
P QS L+F ML S FPN +TFPF+ KA + L +H G +H ++K LSSDL I
Sbjct: 68 PTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILN 127
Query: 247 ALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEG 68
+LI+FY G P+ AH+VF P V WNA+I+ F G AL LF +M E
Sbjct: 128 SLINFYGSSGAPDLAHRVFTNMP--GKDVVSWNAMINAFALGGLPDKALLLFQEM---EM 182
Query: 67 EEVRADGITIVSVLSACA 14
++V+ + IT+VSVLSACA
Sbjct: 183 KDVKPNVITMVSVLSACA 200
Score = 87.8 bits (216), Expect = 4e-15
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G D A +F+ + G D+ +WN MI + P ++LLLF +M V PN T VL
Sbjct: 137 GAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVL 196
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVC------------------- 221
ACA + GR + + + +G + L ++ A++ Y C
Sbjct: 197 SACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIV 256
Query: 220 ------------GDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQ 77
G+ + AH +F P+ T A WNA+IS + ++G + AL LF +M
Sbjct: 257 SWTTMLDGHAKLGNYDEAHCIFDAMPHKWT--AAWNALISAYEQNGKPRVALSLFHEMQL 314
Query: 76 IEGEEVRADGITIVSVLSACADLGA 2
++ + D +T++ L A A LGA
Sbjct: 315 --SKDAKPDEVTLICALCASAQLGA 337
Score = 82.4 bits (202), Expect = 2e-13
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPF 350
+G D A IF + WN +I Y + P +L LF +M L P+ T
Sbjct: 268 LGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLIC 327
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
L A A L +I G +H + KH ++ + H++T+L+ YA CG+ A +VF
Sbjct: 328 ALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVF--HAVER 385
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+A+I G K AL+LF ML+ ++ + +T ++L AC G
Sbjct: 386 KDVYVWSAMIGALAMYGQGKAALDLFSSMLE---AYIKPNAVTFTNILCACNHAG 437
Score = 65.9 bits (159), Expect = 2e-08
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G ++ A+ +F ++ D++ W+ MI +L LF+ MLE+ + PNA TF +L
Sbjct: 371 GNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNIL 430
Query: 343 KACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
AC H ++ G + Q+ +G+ + ++ + G E A K P T
Sbjct: 431 CACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPT 490
Query: 166 SVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+ A+W A++ + G+ + A + +L++E
Sbjct: 491 A-AVWGALLGACSRHGNVELAELAYQNLLELE 521
>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Glycine max]
gi|947123432|gb|KRH71638.1| hypothetical protein
GLYMA_02G160400 [Glycine max]
Length = 780
Score = 150 bits (378), Expect = 6e-34
Identities = 86/198 (43%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Frame = -2
Query: 595 AHMIKTQH---QRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
AHM++T SKLLT+ +S + YA ++F++I P+++ WNT+IRGY S
Sbjct: 93 AHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSD 152
Query: 424 PHQSLLLFAQMLES-PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHIST 248
P QS L+F ML S FPN +TFPF+ KA + L +H G +H ++K LSSDL I
Sbjct: 153 PTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILN 212
Query: 247 ALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEG 68
+LI+FY G P+ AH+VF P V WNA+I+ F G AL LF +M E
Sbjct: 213 SLINFYGSSGAPDLAHRVFTNMP--GKDVVSWNAMINAFALGGLPDKALLLFQEM---EM 267
Query: 67 EEVRADGITIVSVLSACA 14
++V+ + IT+VSVLSACA
Sbjct: 268 KDVKPNVITMVSVLSACA 285
Score = 87.8 bits (216), Expect = 4e-15
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G D A +F+ + G D+ +WN MI + P ++LLLF +M V PN T VL
Sbjct: 222 GAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVL 281
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVC------------------- 221
ACA + GR + + + +G + L ++ A++ Y C
Sbjct: 282 SACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIV 341
Query: 220 ------------GDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQ 77
G+ + AH +F P+ T A WNA+IS + ++G + AL LF +M
Sbjct: 342 SWTTMLDGHAKLGNYDEAHCIFDAMPHKWT--AAWNALISAYEQNGKPRVALSLFHEMQL 399
Query: 76 IEGEEVRADGITIVSVLSACADLGA 2
++ + D +T++ L A A LGA
Sbjct: 400 --SKDAKPDEVTLICALCASAQLGA 422
Score = 82.4 bits (202), Expect = 2e-13
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPF 350
+G D A IF + WN +I Y + P +L LF +M L P+ T
Sbjct: 353 LGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLIC 412
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
L A A L +I G +H + KH ++ + H++T+L+ YA CG+ A +VF
Sbjct: 413 ALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVF--HAVER 470
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+A+I G K AL+LF ML+ ++ + +T ++L AC G
Sbjct: 471 KDVYVWSAMIGALAMYGQGKAALDLFSSMLE---AYIKPNAVTFTNILCACNHAG 522
Score = 65.9 bits (159), Expect = 2e-08
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G ++ A+ +F ++ D++ W+ MI +L LF+ MLE+ + PNA TF +L
Sbjct: 456 GNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNIL 515
Query: 343 KACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTT 167
AC H ++ G + Q+ +G+ + ++ + G E A K P T
Sbjct: 516 CACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPT 575
Query: 166 SVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+ A+W A++ + G+ + A + +L++E
Sbjct: 576 A-AVWGALLGACSRHGNVELAELAYQNLLELE 606
>ref|XP_010248664.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Nelumbo nucifera]
Length = 698
Score = 149 bits (377), Expect = 8e-34
Identities = 84/200 (42%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Frame = -2
Query: 595 AHMIKTQH---QRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
AH+IKT + R LL S + G MDYALSIF ID P+ +N +IRG+
Sbjct: 45 AHVIKTGYLFNPRVAENLLESSAILLPGSMDYALSIFRVIDEPNPAAYNILIRGFTSKQF 104
Query: 424 PHQSLLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTA 245
P +L+LF QM E V P+ YTFP +LKAC+ L ++ G +HAQ+ K GL S +
Sbjct: 105 PENALMLFRQMREDGVLPDKYTFPCILKACSRLRALEEGEQIHAQIAKFGLGSYGFVQNT 164
Query: 244 LISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGE 65
LI YA CG+ E A +VF + WNA+ +G+ KSGH + + LFD ML+
Sbjct: 165 LIHMYANCGEVEVARRVF--DGMLEKEIITWNAMFAGYTKSGHWEEVVNLFDIMLK---S 219
Query: 64 EVRADGITIVSVLSACADLG 5
+V D +T++SVL+AC LG
Sbjct: 220 DVEFDEVTLISVLTACGRLG 239
Score = 106 bits (264), Expect = 1e-20
Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Frame = -2
Query: 586 IKTQHQRHVSKLLTSIC--LSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQS 413
I+ ++ + L+TS+ + G +D A +F + D+ W+ MI GY + + Q+
Sbjct: 251 IEAKNLKGSLNLITSLVDMYAKCGRVDTARKLFDEMPRRDVVAWSAMISGYSQSNQCKQA 310
Query: 412 LLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISF 233
L LF +M V PN T VL +CA L ++ G+ VH+ + + + + + TAL+ F
Sbjct: 311 LSLFHEMQRQNVAPNEVTMVSVLSSCAVLGALEMGKWVHSFIKRKRMKLTVTLGTALMDF 370
Query: 232 YAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRA 53
YA CG E + +VF K P + +V W +I G +G + ALE+F M + +E++
Sbjct: 371 YAKCGSVEYSIEVFEKMP--SKNVLTWTVLIQGLASNGQGRRALEVFSVM---QEKEIQP 425
Query: 52 DGITIVSVLSACADLG 5
+ +T + VLSAC+ G
Sbjct: 426 NDVTFIGVLSACSHGG 441
Score = 100 bits (248), Expect = 7e-19
Identities = 60/174 (34%), Positives = 92/174 (52%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G ++ A +F + +I TWN M GY + + + LF ML+S V + T VL
Sbjct: 173 GEVEVARRVFDGMLEKEIITWNAMFAGYTKSGHWEEVVNLFDIMLKSDVEFDEVTLISVL 232
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTS 164
AC L + G +H + L L++ T+L+ YA CG + A ++F + P
Sbjct: 233 TACGRLGDLELGEWIHEYIEAKNLKGSLNLITSLVDMYAKCGRVDTARKLFDEMP--RRD 290
Query: 163 VALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLGA 2
V W+A+ISG+ +S K AL LF +M + + V + +T+VSVLS+CA LGA
Sbjct: 291 VVAWSAMISGYSQSNQCKQALSLFHEM---QRQNVAPNEVTMVSVLSSCAVLGA 341
>ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Prunus mume]
Length = 738
Score = 149 bits (375), Expect = 1e-33
Identities = 77/183 (42%), Positives = 114/183 (62%), Gaps = 1/183 (0%)
Frame = -2
Query: 559 SKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLES- 383
SKL+T+ LS +DYA +F +I P+++TWNT+IR Y S P +S+L+F +ML+
Sbjct: 66 SKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILIFLEMLDHC 125
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
P+ YT+PF +KA + L ++ GR H +K L SD++I +L+ FY CGD + A
Sbjct: 126 SECPDKYTYPFAIKAASELRALQVGRGFHGMAIKASLGSDIYILNSLVHFYGSCGDLDLA 185
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLS 23
+VFVK P V WN++I+ F + + ALELF +M E E V+ + +T+VSVLS
Sbjct: 186 RRVFVKTP--KKDVVSWNSMITVFAQGNCPQEALELFKEM---EAENVKPNDVTMVSVLS 240
Query: 22 ACA 14
ACA
Sbjct: 241 ACA 243
Score = 95.5 bits (236), Expect = 2e-17
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Frame = -2
Query: 526 VGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPV-FPNAYTFPF 350
+G + A +F+ + DI WN +I Y + P ++L +F ++ +S P+ T
Sbjct: 311 LGNYEEAWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVFNELQKSKSPKPDEVTLVS 370
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
L ACA L +I G +H + K + + H++T+LI YA CGD + A +VF
Sbjct: 371 TLAACAQLGAIDLGGWIHVYIKKQVMKLNCHLTTSLIDMYAKCGDLDKALEVFNS--VER 428
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V +W+A+I+G G + ALE F +ML+ +V+ + +T +VL AC+ G
Sbjct: 429 RDVFVWSAMIAGLAMHGQGRDALEFFSKMLE---AKVKPNAVTFTNVLCACSHTG 480
Score = 95.1 bits (235), Expect = 2e-17
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 29/203 (14%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G +D A +F + D+ +WN+MI + + + P ++L LF +M V PN T VL
Sbjct: 180 GDLDLARRVFVKTPKKDVVSWNSMITVFAQGNCPQEALELFKEMEAENVKPNDVTMVSVL 239
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCP----- 179
ACA + GR V + + ++ + +L ++ A++ Y CG E A ++F + P
Sbjct: 240 SACAKKVDLEFGRWVCSHIQRNEIKENLTLNNAMLDMYVKCGSVEDAKRLFDRMPEKDIV 299
Query: 178 -YTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+TT +A WN +IS + +SG K AL +F+++ +
Sbjct: 300 SWTTMLDGYAQLGNYEEAWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVFNELQ--K 357
Query: 70 GEEVRADGITIVSVLSACADLGA 2
+ + D +T+VS L+ACA LGA
Sbjct: 358 SKSPKPDEVTLVSTLAACAQLGA 380
Score = 70.5 bits (171), Expect = 6e-10
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Frame = -2
Query: 586 IKTQHQRHVSKLLTSIC--LSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQS 413
IK Q + L TS+ + G +D AL +F+ ++ D+F W+ MI G +
Sbjct: 391 IKKQVMKLNCHLTTSLIDMYAKCGDLDKALEVFNSVERRDVFVWSAMIAGLAMHGQGRDA 450
Query: 412 LLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLK-HGLSSDLHISTALIS 236
L F++MLE+ V PNA TF VL AC+H + GR+ Q+ +G+ + ++
Sbjct: 451 LEFFSKMLEAKVKPNAVTFTNVLCACSHTGLVDEGRTFFYQMEPVYGILPGIKHYACMVD 510
Query: 235 FYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
G+ + A ++ K P T+ ++W A++ G+ A + +L+++
Sbjct: 511 ILGRSGNLDEAVELIEKMPIPPTA-SVWGALLGACKLHGNVVLAEKACSHLLELD 564
>ref|XP_008794509.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Phoenix dactylifera]
Length = 626
Score = 148 bits (374), Expect = 2e-33
Identities = 76/180 (42%), Positives = 115/180 (63%)
Frame = -2
Query: 541 ICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAY 362
+ LSP P+ YA ++FS+I P +FT+NTM+RGY +P +LL+ QML + V P+ +
Sbjct: 94 VSLSP-SPLPYAAAVFSQIHLPGVFTYNTMVRGYAESDSPGPALLVHRQMLAAAVTPDTH 152
Query: 361 TFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKC 182
T+PF+LKACA L + G VH+ +K+GL + + + L+ FYA CG E+A++VF
Sbjct: 153 TYPFLLKACAKLMAFREGEKVHSLSVKNGLETSVFVQNTLVHFYATCGLFESAYKVFE-- 210
Query: 181 PYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLGA 2
++ WN++I+GF +G AL LF +M +E V+ DG T+VS+L ACA+LGA
Sbjct: 211 GMDERNLVTWNSIINGFAINGRPNEALTLFREM-SLEDSGVKPDGFTMVSLLCACAELGA 269
Score = 108 bits (271), Expect = 2e-21
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQML--ESPVFPNAYTFPF 350
G + A +F +D ++ TWN++I G+ P+++L LF +M +S V P+ +T
Sbjct: 200 GLFESAYKVFEGMDERNLVTWNSIINGFAINGRPNEALTLFREMSLEDSGVKPDGFTMVS 259
Query: 349 VLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTT 170
+L ACA L ++ GR H L K GL ++H+ ALI YA CG E A++VF + +
Sbjct: 260 LLCACAELGALALGRRAHLYLFKVGLCGNVHVENALIDLYAKCGSVEEAYRVFNE--MAS 317
Query: 169 TSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
+V W ++I G +G K ALELF M E E + IT+V VL AC+ G
Sbjct: 318 KTVVSWTSLIVGMAVNGFGKEALELFSAM---ERERLVPTEITLVGVLYACSHCG 369
>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
gi|557111205|gb|ESQ51489.1| hypothetical protein
EUTSA_v10016305mg [Eutrema salsugineum]
Length = 739
Score = 148 bits (374), Expect = 2e-33
Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Frame = -2
Query: 595 AHMIKT---QHQRHVSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISA 425
A M++T SKL LSP +DYA +F +I P+ FTWNT+IR Y
Sbjct: 52 AQMVRTGLFNDHYSASKLFAIAALSPFASLDYACKVFDQIPQPNSFTWNTLIRAYASGPD 111
Query: 424 PHQSLLLFAQML-ESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHIST 248
P +S+ +F M+ ES +PN YTFPF++KA A +SS+ G+S+H +K + D+ ++
Sbjct: 112 PLRSICVFLDMVSESQCYPNTYTFPFLIKAAAEVSSLSLGQSLHGMAVKSSVGCDVFVAN 171
Query: 247 ALISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEG 68
+LI Y CGD ++A +VF V WN++I+GFV+ G ALELF +M E
Sbjct: 172 SLIHCYFSCGDLDSACKVFT--TIQEKDVVSWNSMITGFVQKGSPDKALELFKKM---ES 226
Query: 67 EEVRADGITIVSVLSACADL 8
EEV+A +T+V VLSACA L
Sbjct: 227 EEVKASHVTMVGVLSACAKL 246
Score = 98.6 bits (244), Expect = 2e-18
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 29/208 (13%)
Frame = -2
Query: 538 CLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYT 359
C G +D A +F+ I D+ +WN+MI G+++ +P ++L LF +M V + T
Sbjct: 176 CYFSCGDLDSACKVFTTIQEKDVVSWNSMITGFVQKGSPDKALELFKKMESEEVKASHVT 235
Query: 358 FPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVF---- 191
VL ACA L ++ GR V + + ++G+ +L ++ A++ Y CG E A ++F
Sbjct: 236 MVGVLSACAKLRNLEFGRQVCSYIEENGVKMNLTLANAMLDMYTKCGSIEDAKRLFDTME 295
Query: 190 VKCPYTTTS-------------------------VALWNAVISGFVKSGHSKHALELFDQ 86
VK T T+ + WNA+IS + ++G AL +F +
Sbjct: 296 VKDNVTWTTMLDGFAILEDYEAARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHE 355
Query: 85 MLQIEGEEVRADGITIVSVLSACADLGA 2
LQ++ + ++ + IT+VS LSACA +GA
Sbjct: 356 -LQLQ-KNIKLNQITLVSTLSACAQVGA 381
Score = 94.7 bits (234), Expect = 3e-17
Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Frame = -2
Query: 508 ALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQM-LESPVFPNAYTFPFVLKACA 332
A + + + DI WN +I Y + P+++LL+F ++ L+ + N T L ACA
Sbjct: 318 ARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACA 377
Query: 331 HLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTSVALW 152
+ ++ GR +H+ + KHG+ S+ ++++ALI Y+ CGD A +VF V +W
Sbjct: 378 QVGALELGRWIHSYIKKHGIRSNFYVTSALIHMYSKCGDLVKAREVF--NTVEKRDVFVW 435
Query: 151 NAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
+A+I G G AL++F +M + V+ +G+T +V AC+ G
Sbjct: 436 SAMIGGLAMHGCGNDALDMFYKM---QEANVKPNGVTFTNVFCACSHSG 481
>ref|XP_011620813.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Amborella trichopoda]
Length = 635
Score = 148 bits (373), Expect = 2e-33
Identities = 83/194 (42%), Positives = 113/194 (58%), Gaps = 7/194 (3%)
Frame = -2
Query: 562 VSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLES 383
V K L +S PM YAL+IFS I P+ FTWNTMI+G+ +S+ F QM+
Sbjct: 90 VGKHLIFSLVSLSTPMRYALNIFSHIQFPNAFTWNTMIKGFSDQEQAQKSIDFFHQMVND 149
Query: 382 PVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAA 203
+ P+ +T+PF LKACA L+S+ +H + LK G S + ALI Y+ CG+PE A
Sbjct: 150 GIAPDTHTYPFSLKACAMLNSLRESEKIHCKALKDGFGSLVFGQNALIHAYSACGEPERA 209
Query: 202 HQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEV-------RADGI 44
HQ+F + P ++ WN++I+GF +G AL LFD+M G V DG
Sbjct: 210 HQLFTEMP--LKNLVSWNSIINGFAINGRPNEALTLFDRM---RGGHVGPGPMGLEPDGF 264
Query: 43 TIVSVLSACADLGA 2
TIVS+LSACA+LGA
Sbjct: 265 TIVSLLSACAELGA 278
Score = 85.1 bits (209), Expect = 2e-14
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Frame = -2
Query: 532 SPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFP------ 371
S G + A +F+ + ++ +WN++I G+ P+++L LF +M V P
Sbjct: 201 SACGEPERAHQLFTEMPLKNLVSWNSIINGFAINGRPNEALTLFDRMRGGHVGPGPMGLE 260
Query: 370 -NAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQV 194
+ +T +L ACA L +++ G+ VH +K G + + H+ +LI FY+ G A +V
Sbjct: 261 PDGFTIVSLLSACAELGALNLGQRVHNYAIKLGFNFNTHVLNSLIDFYSKSGVIFGAREV 320
Query: 193 FVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACA 14
F + T V W A+I G G + AL LF +E E VR IT V VL AC+
Sbjct: 321 FDEMVERT--VVSWTAMICGLAAHGLAIEALALF---RGLERERVRPSEITFVGVLYACS 375
Query: 13 DLG 5
G
Sbjct: 376 HAG 378
>ref|XP_011627771.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial [Amborella trichopoda]
Length = 607
Score = 147 bits (372), Expect = 3e-33
Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Frame = -2
Query: 592 HMIKTQHQRH---VSKLLTSICLSPVGPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAP 422
HMI QR + KLL+ +SP+G +DY +F++I P+ F WNT+IRG+ P
Sbjct: 10 HMITNDLQREGYALEKLLSFCAVSPLGDLDYGFLVFNQIQEPNRFMWNTIIRGFSNSPYP 69
Query: 421 HQSLLLFAQMLESPVFPNAYTFPFVLKACAHLSSIHRGRSVHAQLLKHGLSSDLHISTAL 242
++ L+ QML +FPN +TFPFVLKAC LSSI G+ VH + K G + + + AL
Sbjct: 70 KEAFFLYKQMLNQGLFPNNFTFPFVLKACTQLSSIREGKIVHTHITKLGFTCQIVVQNAL 129
Query: 241 ISFYAVCGDPEAAHQVFVKCPYTTTSVALWNAVISGFVKSGHSKHALELFDQMLQIEGEE 62
+ Y G A Q+F + T ++ WN++I G+ + GH ALE F +M E
Sbjct: 130 LHTYVASGSIPLARQLFDE--ITHKNIISWNSMIGGYSQQGHVDKALEFFTEM---ENLG 184
Query: 61 VRADGITIVSVLSACADLG 5
+ D ITIVS+LS C+ G
Sbjct: 185 IEPDEITIVSMLSVCSQTG 203
Score = 94.4 bits (233), Expect = 4e-17
Identities = 52/173 (30%), Positives = 89/173 (51%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G +D A F ++ ++ +WN +I G+ + ++L L M S V P+ T +L
Sbjct: 269 GMLDLAYRFFEQMPEKNVVSWNALIAGFAQQDRGREALDLLTCMENSNVMPDEATLASIL 328
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCPYTTTS 164
C L +++G+ +H + ++G ++ ++ ALI YA CG + A +F + P +
Sbjct: 329 AICGQLGDLNQGKRIHNYICQNGFGFNVTLTNALIDMYAKCGSVDFALSLFNEMP--ERN 386
Query: 163 VALWNAVISGFVKSGHSKHALELFDQMLQIEGEEVRADGITIVSVLSACADLG 5
V WN +I+G G A++LF+ ML I V D IT V +L AC+ +G
Sbjct: 387 VVSWNVMINGLAMHGRGLIAIDLFNSMLAI---GVEPDEITFVGLLCACSHVG 436
Score = 89.0 bits (219), Expect = 2e-15
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Frame = -2
Query: 523 GPMDYALSIFSRIDGPDIFTWNTMIRGYIRISAPHQSLLLFAQMLESPVFPNAYTFPFVL 344
G + A +F I +I +WN+MI GY + ++L F +M + P+ T +L
Sbjct: 137 GSIPLARQLFDEITHKNIISWNSMIGGYSQQGHVDKALEFFTEMENLGIEPDEITIVSML 196
Query: 343 KACAHLSSIHRGRSVHAQLLKHGLSSDLHISTALISFYAVCGDPEAAHQVFVKCP----- 179
C+ + GRS+H + K G+ +D+++ AL+ YA CG A +F + P
Sbjct: 197 SVCSQTGDLEFGRSLHFCIAKKGIRADVYVHNALVDMYAKCGQIREARLIFDQMPERNVV 256
Query: 178 -YTT-----------------------TSVALWNAVISGFVKSGHSKHALELFDQMLQIE 71
+TT +V WNA+I+GF + + AL+L M E
Sbjct: 257 SWTTMVTAYVKQGMLDLAYRFFEQMPEKNVVSWNALIAGFAQQDRGREALDLLTCM---E 313
Query: 70 GEEVRADGITIVSVLSACADLG 5
V D T+ S+L+ C LG
Sbjct: 314 NSNVMPDEATLASILAICGQLG 335