BLASTX nr result
ID: Cinnamomum24_contig00019842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00019842
(646 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 330 6e-88
ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s... 293 8e-77
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 292 1e-76
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 288 1e-75
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 288 1e-75
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s... 284 3e-74
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 284 3e-74
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s... 284 4e-74
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 284 4e-74
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 284 4e-74
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s... 283 5e-74
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s... 283 5e-74
gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin... 283 6e-74
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 283 6e-74
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 283 6e-74
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s... 282 1e-73
ref|XP_010666568.1| PREDICTED: DNA-directed RNA polymerase III s... 282 1e-73
ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III s... 281 3e-73
gb|KHG07033.1| DNA-directed RNA polymerase III subunit RPC1 [Gos... 280 4e-73
gb|KNA22334.1| hypothetical protein SOVF_034890 [Spinacia oleracea] 278 2e-72
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 330 bits (845), Expect = 6e-88
Identities = 160/217 (73%), Positives = 192/217 (88%), Gaps = 2/217 (0%)
Frame = -1
Query: 646 NYNRVNVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSN 467
++ V+VL+P R+LALFK+M+D+DCELLYLYDRPEKLIITDIAVPP+AIRPS+FMDAG+
Sbjct: 222 SFRVVHVLNPVRILALFKRMVDEDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTM 281
Query: 466 SNEDDITTKLVSILQSNATLQESLQGGLHNFP--IHWEMLQVYVAQYINSEVRGVPANVT 293
SNEDDIT+KL +I+++NA L++ LQG + W+ LQ+ VAQYINS+VRG+P ++
Sbjct: 282 SNEDDITSKLSAIIRANAPLRQDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQ 341
Query: 292 PSKPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYP 113
PSKP RGFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQILTYP
Sbjct: 342 PSKPLRGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYP 401
Query: 112 ERVSNYNIEKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
ERVS++NIEKLRQCVRNG +KYPGANF+ PDGS +N
Sbjct: 402 ERVSHHNIEKLRQCVRNGSQKYPGANFIRYPDGSIMN 438
>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
indicum]
Length = 1405
Score = 293 bits (749), Expect = 8e-77
Identities = 144/217 (66%), Positives = 182/217 (83%), Gaps = 2/217 (0%)
Frame = -1
Query: 646 NYNRVNVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSN 467
N N +++ P V L + MLD+DCELLYL DRPEKL++T+I VPP+AIRPS+F+D G+
Sbjct: 214 NVNFSSIIDPKLVYQLLRNMLDEDCELLYLNDRPEKLMVTNILVPPIAIRPSVFVDGGTQ 273
Query: 466 SNEDDITTKLVSILQSNATL-QESLQGGLHNFPI-HWEMLQVYVAQYINSEVRGVPANVT 293
SNE+DIT +L I+Q+NA+L QE L+ L+N + W+ LQ+ VAQYINS+VRG+P ++T
Sbjct: 274 SNENDITERLKRIIQANASLRQELLETNLYNKNLTSWDDLQMEVAQYINSDVRGLPFHMT 333
Query: 292 PSKPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYP 113
+KP GFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKI+EVAIPILMA+ILTYP
Sbjct: 334 TAKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPILMARILTYP 393
Query: 112 ERVSNYNIEKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
ERVS++NIEKLRQCVRNGP KYPGA F+ PDG++++
Sbjct: 394 ERVSHHNIEKLRQCVRNGPNKYPGAKFIRQPDGTEIS 430
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 292 bits (747), Expect = 1e-76
Identities = 152/208 (73%), Positives = 172/208 (82%), Gaps = 2/208 (0%)
Frame = -1
Query: 628 VLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDI 449
VL+P +VL+LFK+M D DCELLYL DRPEKLIIT+IAVPP+ IRPS+ MD GS SNE+DI
Sbjct: 217 VLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMD-GSQSNENDI 275
Query: 448 TTKLVSILQSNATLQESLQGGLHNFPI--HWEMLQVYVAQYINSEVRGVPANVTPSKPTR 275
T +L I+Q+NA+L++ L F WEMLQV VAQYINS+VRGVP ++ SKP
Sbjct: 276 TERLKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLS 335
Query: 274 GFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNY 95
GFVQRIKGK GRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA+ILTYPERVSN+
Sbjct: 336 GFVQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNH 395
Query: 94 NIEKLRQCVRNGPKKYPGANFVLTPDGS 11
NIEKLRQCVRNGP KYPGA V PDGS
Sbjct: 396 NIEKLRQCVRNGPSKYPGARMVRYPDGS 423
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 288 bits (738), Expect = 1e-75
Identities = 138/214 (64%), Positives = 178/214 (83%), Gaps = 2/214 (0%)
Frame = -1
Query: 646 NYNRVNVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSN 467
+++ V++L+P +VL+LFK+M+D+DC+LL L +RPEKL++T+I VPP+AIRPS+FMD G+
Sbjct: 213 SFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQ 272
Query: 466 SNEDDITTKLVSILQSNATLQESLQ--GGLHNFPIHWEMLQVYVAQYINSEVRGVPANVT 293
SNE+D+T +L I+Q+NA+L + LQ G W+ LQ+ VAQYINS+VRGVP +
Sbjct: 273 SNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQ 332
Query: 292 PSKPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYP 113
++P GFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA+IL+YP
Sbjct: 333 AARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYP 392
Query: 112 ERVSNYNIEKLRQCVRNGPKKYPGANFVLTPDGS 11
ERVS++NIEKLRQC+ NGP KYPGA + PDGS
Sbjct: 393 ERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGS 426
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
vinifera]
Length = 1383
Score = 288 bits (738), Expect = 1e-75
Identities = 138/214 (64%), Positives = 178/214 (83%), Gaps = 2/214 (0%)
Frame = -1
Query: 646 NYNRVNVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSN 467
+++ V++L+P +VL+LFK+M+D+DC+LL L +RPEKL++T+I VPP+AIRPS+FMD G+
Sbjct: 213 SFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQ 272
Query: 466 SNEDDITTKLVSILQSNATLQESLQ--GGLHNFPIHWEMLQVYVAQYINSEVRGVPANVT 293
SNE+D+T +L I+Q+NA+L + LQ G W+ LQ+ VAQYINS+VRGVP +
Sbjct: 273 SNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQ 332
Query: 292 PSKPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYP 113
++P GFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA+IL+YP
Sbjct: 333 AARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYP 392
Query: 112 ERVSNYNIEKLRQCVRNGPKKYPGANFVLTPDGS 11
ERVS++NIEKLRQC+ NGP KYPGA + PDGS
Sbjct: 393 ERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGS 426
>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Gossypium raimondii] gi|763752836|gb|KJB20224.1|
hypothetical protein B456_003G139100 [Gossypium
raimondii]
Length = 1398
Score = 284 bits (727), Expect = 3e-74
Identities = 147/214 (68%), Positives = 175/214 (81%), Gaps = 4/214 (1%)
Frame = -1
Query: 640 NRVNVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSN 461
N +VL+P +VL+LFK+M D DCELLYL DRPEK IIT+IAVPP AIRPS+ +D GS SN
Sbjct: 217 NTSSVLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVD-GSQSN 275
Query: 460 EDDITTKLVSILQSNATLQESLQGGLHNFPIH----WEMLQVYVAQYINSEVRGVPANVT 293
E+DIT +L I+Q+N++L++ L N H W++LQV VAQYINS+VRGVP +
Sbjct: 276 ENDITERLKRIIQANSSLRQQLVDS--NAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQ 333
Query: 292 PSKPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYP 113
P++P GF+QR+KGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPI MA+IL+YP
Sbjct: 334 PARPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYP 393
Query: 112 ERVSNYNIEKLRQCVRNGPKKYPGANFVLTPDGS 11
ERVS++NIEKLRQCVRNGP KYPGA V PDGS
Sbjct: 394 ERVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGS 427
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
lycopersicum]
Length = 1390
Score = 284 bits (727), Expect = 3e-74
Identities = 139/209 (66%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Frame = -1
Query: 625 LHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDIT 446
+ P V +LFK M D+DCELLYL DRPEKL++T I VPP+AIRPS+F+D G+ SNE+DIT
Sbjct: 218 IDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDIT 277
Query: 445 TKLVSILQSNATLQESLQGGLHNFPIH-WEMLQVYVAQYINSEVRGVPANVTPSKPTRGF 269
+L I+Q+NA+L + + ++ W LQ+ VAQYINS+VRGVP + P +P GF
Sbjct: 278 ERLKRIIQANASLHQEMSDSSPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGF 337
Query: 268 VQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNYNI 89
QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQILTYPERVS +NI
Sbjct: 338 TQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNI 397
Query: 88 EKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
EKLRQCVRNGP KYPGA F+ PDG++++
Sbjct: 398 EKLRQCVRNGPNKYPGAKFIRHPDGNEMS 426
>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris]
Length = 1390
Score = 284 bits (726), Expect = 4e-74
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Frame = -1
Query: 625 LHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDIT 446
+ P V +LFK M D+DCELLYL DRPEKL++T I VPP+AIRPS+F+D G+ SNE+DIT
Sbjct: 218 IDPKAVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDIT 277
Query: 445 TKLVSILQSNATLQESLQG-GLHNFPIH-WEMLQVYVAQYINSEVRGVPANVTPSKPTRG 272
+L I+Q NA L E + N ++ W LQ+ VAQYINS+VRGVP ++ SKP G
Sbjct: 278 ERLKRIIQENARLLEDISDTSFQNKSLNAWVGLQMEVAQYINSDVRGVPLHLQASKPMSG 337
Query: 271 FVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNYN 92
F QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA+ILTYPERVS +N
Sbjct: 338 FTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHN 397
Query: 91 IEKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
IEKLRQCVRNGP KYPGA F+ PDG++++
Sbjct: 398 IEKLRQCVRNGPNKYPGAKFIKHPDGTEIS 427
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 284 bits (726), Expect = 4e-74
Identities = 140/209 (66%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Frame = -1
Query: 625 LHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDIT 446
L P V +LFK M D+DCELLYL DRPEKL++T I VPP+AIRPS+F+D G+ SNE+DIT
Sbjct: 218 LDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDIT 277
Query: 445 TKLVSILQSNATLQESLQGGLHNFPIH-WEMLQVYVAQYINSEVRGVPANVTPSKPTRGF 269
+L I+Q+NA+L + + ++ W LQ+ VAQYINS+VRGVP ++ +P GF
Sbjct: 278 ERLKRIIQANASLHQEMSDSSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGF 337
Query: 268 VQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNYNI 89
QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQILTYPERVS +NI
Sbjct: 338 TQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNI 397
Query: 88 EKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
EKLRQCVRNGP KYPGA F+ PDGS+++
Sbjct: 398 EKLRQCVRNGPNKYPGAKFIRHPDGSEIS 426
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 284 bits (726), Expect = 4e-74
Identities = 140/209 (66%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Frame = -1
Query: 625 LHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDIT 446
L P V +LFK M D+DCELLYL DRPEKL++T I VPP+AIRPS+F+D G+ SNE+DIT
Sbjct: 218 LDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDIT 277
Query: 445 TKLVSILQSNATLQESLQGGLHNFPIH-WEMLQVYVAQYINSEVRGVPANVTPSKPTRGF 269
+L I+Q+NA+L + + ++ W LQ+ VAQYINS+VRGVP ++ +P GF
Sbjct: 278 ERLKRIIQANASLHQEMSDSSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGF 337
Query: 268 VQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNYNI 89
QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQILTYPERVS +NI
Sbjct: 338 TQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNI 397
Query: 88 EKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
EKLRQCVRNGP KYPGA F+ PDGS+++
Sbjct: 398 EKLRQCVRNGPNKYPGAKFIRHPDGSEIS 426
>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Nicotiana tomentosiformis]
gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
tomentosiformis]
Length = 1375
Score = 283 bits (725), Expect = 5e-74
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Frame = -1
Query: 625 LHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDIT 446
+ P V +LFK M D+DCELLYL DRPEKL++T I VPP+AIRPS+F+D G+ SNE+DIT
Sbjct: 218 IDPKAVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDIT 277
Query: 445 TKLVSILQSNATLQESLQG-GLHNFPIH-WEMLQVYVAQYINSEVRGVPANVTPSKPTRG 272
+L I+Q+NA L E + N + W LQ+ VAQYINS+VRGVP ++ SKP G
Sbjct: 278 ERLKRIIQANARLLEDISDTSFQNKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSG 337
Query: 271 FVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNYN 92
F QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA+ILTYPERVS +N
Sbjct: 338 FTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHN 397
Query: 91 IEKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
IEKLRQCVRNGP KYPGA F+ PDG++++
Sbjct: 398 IEKLRQCVRNGPNKYPGAKFIKHPDGTEIS 427
>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Nicotiana tomentosiformis]
gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
tomentosiformis]
Length = 1390
Score = 283 bits (725), Expect = 5e-74
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Frame = -1
Query: 625 LHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDIT 446
+ P V +LFK M D+DCELLYL DRPEKL++T I VPP+AIRPS+F+D G+ SNE+DIT
Sbjct: 218 IDPKAVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDIT 277
Query: 445 TKLVSILQSNATLQESLQG-GLHNFPIH-WEMLQVYVAQYINSEVRGVPANVTPSKPTRG 272
+L I+Q+NA L E + N + W LQ+ VAQYINS+VRGVP ++ SKP G
Sbjct: 278 ERLKRIIQANARLLEDISDTSFQNKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSG 337
Query: 271 FVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNYN 92
F QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA+ILTYPERVS +N
Sbjct: 338 FTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHN 397
Query: 91 IEKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
IEKLRQCVRNGP KYPGA F+ PDG++++
Sbjct: 398 IEKLRQCVRNGPNKYPGAKFIKHPDGTEIS 427
>gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis]
gi|641854233|gb|KDO73041.1| hypothetical protein
CISIN_1g000828mg [Citrus sinensis]
Length = 1265
Score = 283 bits (724), Expect = 6e-74
Identities = 143/208 (68%), Positives = 171/208 (82%), Gaps = 2/208 (0%)
Frame = -1
Query: 628 VLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDI 449
+L+P VL LFK+M D DCE+LYL +RPEKLIIT+IAVPP+AIRPS+ MD GS SNE+DI
Sbjct: 85 ILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMD-GSQSNENDI 143
Query: 448 TTKLVSILQSNATLQESLQGGLHNFP--IHWEMLQVYVAQYINSEVRGVPANVTPSKPTR 275
T +L I+Q+NA+LQ+ L F WE LQV VAQYINS+VRGVP ++ ++P
Sbjct: 144 TERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLS 203
Query: 274 GFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNY 95
GFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA+ILTYPERVS++
Sbjct: 204 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDH 263
Query: 94 NIEKLRQCVRNGPKKYPGANFVLTPDGS 11
NIEKLRQC++NGP KYPGA + PDG+
Sbjct: 264 NIEKLRQCIQNGPDKYPGARMIRYPDGT 291
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 283 bits (724), Expect = 6e-74
Identities = 143/208 (68%), Positives = 171/208 (82%), Gaps = 2/208 (0%)
Frame = -1
Query: 628 VLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDI 449
+L+P VL LFK+M D DCE+LYL +RPEKLIIT+IAVPP+AIRPS+ MD GS SNE+DI
Sbjct: 224 ILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMD-GSQSNENDI 282
Query: 448 TTKLVSILQSNATLQESLQGGLHNFP--IHWEMLQVYVAQYINSEVRGVPANVTPSKPTR 275
T +L I+Q+NA+LQ+ L F WE LQV VAQYINS+VRGVP ++ ++P
Sbjct: 283 TERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLS 342
Query: 274 GFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNY 95
GFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA+ILTYPERVS++
Sbjct: 343 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDH 402
Query: 94 NIEKLRQCVRNGPKKYPGANFVLTPDGS 11
NIEKLRQC++NGP KYPGA + PDG+
Sbjct: 403 NIEKLRQCIQNGPDKYPGARMIRYPDGT 430
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 283 bits (724), Expect = 6e-74
Identities = 143/208 (68%), Positives = 171/208 (82%), Gaps = 2/208 (0%)
Frame = -1
Query: 628 VLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDI 449
+L+P VL LFK+M D DCE+LYL +RPEKLIIT+IAVPP+AIRPS+ MD GS SNE+DI
Sbjct: 239 ILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMD-GSQSNENDI 297
Query: 448 TTKLVSILQSNATLQESLQGGLHNFP--IHWEMLQVYVAQYINSEVRGVPANVTPSKPTR 275
T +L I+Q+NA+LQ+ L F WE LQV VAQYINS+VRGVP ++ ++P
Sbjct: 298 TERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLS 357
Query: 274 GFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSNY 95
GFVQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA+ILTYPERVS++
Sbjct: 358 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDH 417
Query: 94 NIEKLRQCVRNGPKKYPGANFVLTPDGS 11
NIEKLRQC++NGP KYPGA + PDG+
Sbjct: 418 NIEKLRQCIQNGPDKYPGARMIRYPDGT 445
>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
guineensis]
Length = 1369
Score = 282 bits (721), Expect = 1e-73
Identities = 145/212 (68%), Positives = 170/212 (80%), Gaps = 2/212 (0%)
Frame = -1
Query: 631 NVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDD 452
+VL VL+LF+KMLD+DCELL LYDRPEKLI+T IAVPPV+IRPS+ +D+G +SNED+
Sbjct: 210 HVLSAVAVLSLFRKMLDEDCELLNLYDRPEKLIVTHIAVPPVSIRPSVIVDSGRSSNEDN 269
Query: 451 ITTKLVSILQSNATLQESLQGGLHNFPIH--WEMLQVYVAQYINSEVRGVPANVTPSKPT 278
IT+ L +I+ +N+ L+E L+G F W LQ+ V +YINSE A P
Sbjct: 270 ITSILKNIINTNSILREDLEGAAPPFKCLDCWTHLQIQVVEYINSE-----APCIPDSKH 324
Query: 277 RGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSN 98
RG VQR+KGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMA++LTYPERVSN
Sbjct: 325 RGLVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMARVLTYPERVSN 384
Query: 97 YNIEKLRQCVRNGPKKYPGANFVLTPDGSKLN 2
YNIEKLRQ VRNGP KYPGANFVL PDGSK++
Sbjct: 385 YNIEKLRQLVRNGPSKYPGANFVLRPDGSKVH 416
>ref|XP_010666568.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Beta
vulgaris subsp. vulgaris] gi|870842632|gb|KMS96001.1|
hypothetical protein BVRB_002940 [Beta vulgaris subsp.
vulgaris]
Length = 1352
Score = 282 bits (721), Expect = 1e-73
Identities = 139/210 (66%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
Frame = -1
Query: 631 NVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDD 452
++++P L LFK+MLD+DCELLYL +RPE LIIT+++VPP+A+RPS+F+D G SNE+D
Sbjct: 205 SLINPHDALLLFKQMLDQDCELLYLNNRPENLIITNVSVPPMALRPSVFVDGGIQSNEND 264
Query: 451 ITTKLVSILQSNATLQESLQGGLHNFPI--HWEMLQVYVAQYINSEVRGVPANVTPSKPT 278
IT +L I+Q+NA L + LQ ++ I W+ LQV VAQYINS+VR P+KP
Sbjct: 265 ITERLKRIIQANACLHQGLQEPSSSYKILDDWDYLQVEVAQYINSDVRVALQGQQPTKPL 324
Query: 277 RGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVSN 98
GFVQR+KGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVA+P+LMA ILTYPE V++
Sbjct: 325 SGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPLLMASILTYPECVNH 384
Query: 97 YNIEKLRQCVRNGPKKYPGANFVLTPDGSK 8
+NIEKLRQCVRNGPKKYPGA FV+ P+G K
Sbjct: 385 HNIEKLRQCVRNGPKKYPGAKFVIEPNGDK 414
>ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Tarenaya
hassleriana]
Length = 1376
Score = 281 bits (718), Expect = 3e-73
Identities = 147/212 (69%), Positives = 170/212 (80%), Gaps = 6/212 (2%)
Frame = -1
Query: 628 VLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDDI 449
VL+P VLALFK M +KDCELLYL DRPEKLIIT IAVPP++IRPS+ + G+ SNE+DI
Sbjct: 223 VLNPVSVLALFKGMSNKDCELLYLADRPEKLIITSIAVPPISIRPSVII-GGTQSNENDI 281
Query: 448 TTKLVSILQSNATLQESL------QGGLHNFPIHWEMLQVYVAQYINSEVRGVPANVTPS 287
T +L ++Q+NA+L++ L LH WE LQV VAQYINS+VRGVP + PS
Sbjct: 282 TERLKRVIQNNASLRQFLVEPTTSPKNLHA----WESLQVEVAQYINSDVRGVPLAMQPS 337
Query: 286 KPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPER 107
KP GF+QR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPILMA+ILT+PE
Sbjct: 338 KPLSGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTFPEC 397
Query: 106 VSNYNIEKLRQCVRNGPKKYPGANFVLTPDGS 11
VS +NIEKLRQCVRNGP KYPGA V PDGS
Sbjct: 398 VSRHNIEKLRQCVRNGPYKYPGARLVRYPDGS 429
>gb|KHG07033.1| DNA-directed RNA polymerase III subunit RPC1 [Gossypium arboreum]
Length = 1050
Score = 280 bits (717), Expect = 4e-73
Identities = 146/214 (68%), Positives = 173/214 (80%), Gaps = 4/214 (1%)
Frame = -1
Query: 640 NRVNVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSN 461
N +VL+P +VL+LFK+M D DCELLYL DRPEK IIT+IAVPP AIRPS+ +D SN
Sbjct: 217 NTSSVLNPVKVLSLFKRMTDVDCELLYLSDRPEKFIITNIAVPPTAIRPSVPVD----SN 272
Query: 460 EDDITTKLVSILQSNATLQESLQGGLHNFPIH----WEMLQVYVAQYINSEVRGVPANVT 293
E+DIT +L I+Q+N++L++ L N H W++LQV VAQYINS+VRGVP +
Sbjct: 273 ENDITERLKRIIQANSSLRQQLVDS--NAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQ 330
Query: 292 PSKPTRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYP 113
PS+P GF+QR+KGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPI MA+IL+YP
Sbjct: 331 PSRPLSGFLQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYP 390
Query: 112 ERVSNYNIEKLRQCVRNGPKKYPGANFVLTPDGS 11
ERVS++NIEKLRQCVRNGP KYPGA V PDGS
Sbjct: 391 ERVSSHNIEKLRQCVRNGPSKYPGAVKVRYPDGS 424
>gb|KNA22334.1| hypothetical protein SOVF_034890 [Spinacia oleracea]
Length = 1352
Score = 278 bits (711), Expect = 2e-72
Identities = 138/211 (65%), Positives = 171/211 (81%), Gaps = 3/211 (1%)
Frame = -1
Query: 631 NVLHPARVLALFKKMLDKDCELLYLYDRPEKLIITDIAVPPVAIRPSIFMDAGSNSNEDD 452
++++P L LF +MLD+DCELLYL +RPEKL+IT+I+VPP+A+RPS+F+D G SNE+D
Sbjct: 205 SLINPHDALLLFNQMLDQDCELLYLNNRPEKLLITNISVPPLALRPSVFVDGGIQSNEND 264
Query: 451 ITTKLVSILQSNATLQESLQGGLHNFPI--HWEMLQVYVAQYINSEVR-GVPANVTPSKP 281
IT +L I+Q+NA L + LQ ++F + W+ LQV VAQYINS+VR V P+KP
Sbjct: 265 ITERLKRIIQANACLSQGLQDPSNSFKVLDDWDYLQVEVAQYINSDVRVAVLQGQQPTKP 324
Query: 280 TRGFVQRIKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQILTYPERVS 101
GFVQR+KGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITE+ +P+LMA ILTYPE V+
Sbjct: 325 LSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITELGVPLLMASILTYPECVN 384
Query: 100 NYNIEKLRQCVRNGPKKYPGANFVLTPDGSK 8
+NIEKLRQCVRNGPKKYPGA FV+ P+G K
Sbjct: 385 RHNIEKLRQCVRNGPKKYPGAKFVVEPNGDK 415