BLASTX nr result

ID: Cinnamomum24_contig00019531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019531
         (532 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249626.1| PREDICTED: transcription factor FER-LIKE IRO...    71   4e-10
ref|XP_010249625.1| PREDICTED: transcription factor FER-LIKE IRO...    64   6e-08

>ref|XP_010249626.1| PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED
           TRANSCRIPTION FACTOR-like [Nelumbo nucifera]
          Length = 385

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 59/174 (33%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
 Frame = +1

Query: 25  MEMELGPSTFPEVSQMPTHSDTWSADMISSWLDSDDIYTPTFPEQLDNIHFLDNFPQFSL 204
           ME E+G  +F E +Q   +      DMISSWLD DDIY PTFP++++ ++  D   QF  
Sbjct: 1   METEVGAFSFQEQNQATLNPRPRYLDMISSWLDQDDIYNPTFPQEVEMLN--DPLFQFIT 58

Query: 205 PDFESDPFSLIAQQEEYSPLDH---SESQPDPTAGDNQFLTEIPVTAEPMTHSTTPIEED 375
            D ES+ FS   + +    L H    + QP P +  +    +  +T   M         D
Sbjct: 59  SDLESNLFSHPPRPDTDESLVHLHDFDPQPSPESVQS---VDTKLTQNQML-------VD 108

Query: 376 ESDCFL-SDDLCAVMPDESYESFFDHIMGL---GSTPTTIDSCCVNLQMSPVTN 525
             D FL SD L  + P ES  S  DH+       +TPT +DS  V+      TN
Sbjct: 109 VCDAFLDSDYLGLIAPAESQGSIDDHVFQSIMDSTTPTLVDSVEVDTPQPINTN 162


>ref|XP_010249625.1| PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED
           TRANSCRIPTION FACTOR-like [Nelumbo nucifera]
          Length = 397

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
 Frame = +1

Query: 34  ELGPSTFPEVSQMPT-----HSDTWSADMISSWLDSDDIYTP--TFPEQLDNIHFLDN-F 189
           E+G  +F E +Q PT     +  T   D+ISSWLD DD Y P  +FP++L ++  LD+  
Sbjct: 3   EVGDFSFQEENQ-PTIETTPNPTTRYVDIISSWLDQDDTYNPSSSFPQELQDLQMLDDPL 61

Query: 190 PQFSLPDFESDPFSLIAQQ--EEYSPLDHSESQPDPTAGDNQFLTEIPVTAEPMTHSTTP 363
            QF   D +S+ FSL   +     S LD     P   + ++    +I V    +TH+   
Sbjct: 62  FQFITSDLDSNLFSLQPPRPHTHESLLDFPSFDPGRPSTES---VQISVDTTLITHN--H 116

Query: 364 IEEDESDCFLSDD---LCAVMPDESYESFFDHIMGL---GSTPTTIDSCCVNLQMSPVTN 525
           +E D  D F+ D       + P+ES +S  DH+       +TPT +DS  V+      TN
Sbjct: 117 LEVDVRDAFVDDGNYLSLLIAPEESQDSIDDHVFQSIMDSTTPTALDSVEVDTPQPINTN 176


Top