BLASTX nr result

ID: Cinnamomum24_contig00019508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00019508
         (564 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010926911.1| PREDICTED: SART-1 family protein DOT2 [Elaei...    72   1e-10
ref|XP_008806835.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...    69   2e-09
ref|XP_008806833.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...    69   2e-09
ref|XP_010656678.1| PREDICTED: SART-1 family protein DOT2 [Vitis...    62   1e-07
emb|CAN77549.1| hypothetical protein VITISV_017244 [Vitis vinifera]    62   1e-07
ref|XP_010679669.1| PREDICTED: SART-1 family protein DOT2 [Beta ...    60   7e-07

>ref|XP_010926911.1| PREDICTED: SART-1 family protein DOT2 [Elaeis guineensis]
          Length = 1017

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 41/110 (37%), Positives = 68/110 (61%), Gaps = 14/110 (12%)
 Frame = -3

Query: 406 MDMEWSESRYEHKQDSRFESSSPDAVYREEKMDDFED--------GVGTVI---ATKDKG 260
           MDME  E R E + ++RF   S +   R+E+MD+ ED        G+G       ++DKG
Sbjct: 1   MDMELGEIRME-QDEARFGKGSLERAARDEEMDELEDYGGDMGIDGIGKEDNDNGSRDKG 59

Query: 259 KSRDSGKHRSKD---RKKERRDHGSKDRERAKIDLLKESEENQNELREND 119
           KSR+SGKHRSK+   R++E ++HG++D ER+K+   +E + ++ + ++ D
Sbjct: 60  KSRESGKHRSKEGRKRRREEKEHGNRDGERSKVKEKEERDSDRYDAKDKD 109


>ref|XP_008806835.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 1 isoform X2
           [Phoenix dactylifera]
          Length = 1013

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 14/114 (12%)
 Frame = -3

Query: 406 MDMEWSESRYEHKQDSRFESSSPDAVYREEKMDDFED--------GVGTV---IATKDKG 260
           MDME  E R E + ++RF + S +   R+E+ D+ ED        G+G       +KDKG
Sbjct: 1   MDMELGEIRME-QDEARFGNGSLERAARDEETDELEDYGGDMETDGIGKEDNDSGSKDKG 59

Query: 259 KSRDSGKHRSKDRKKERRD---HGSKDRERAKIDLLKESEENQNELRENDHIGS 107
           KSR+SGKH+SK+ KK RR+   HGS+D ER+K    +  + ++ + R+ D   S
Sbjct: 60  KSRESGKHKSKEGKKRRREEKVHGSRDGERSKEREKENRDLDRYDTRDKDRFES 113


>ref|XP_008806833.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
           [Phoenix dactylifera]
          Length = 1040

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 14/114 (12%)
 Frame = -3

Query: 406 MDMEWSESRYEHKQDSRFESSSPDAVYREEKMDDFED--------GVGTV---IATKDKG 260
           MDME  E R E + ++RF + S +   R+E+ D+ ED        G+G       +KDKG
Sbjct: 28  MDMELGEIRME-QDEARFGNGSLERAARDEETDELEDYGGDMETDGIGKEDNDSGSKDKG 86

Query: 259 KSRDSGKHRSKDRKKERRD---HGSKDRERAKIDLLKESEENQNELRENDHIGS 107
           KSR+SGKH+SK+ KK RR+   HGS+D ER+K    +  + ++ + R+ D   S
Sbjct: 87  KSRESGKHKSKEGKKRRREEKVHGSRDGERSKEREKENRDLDRYDTRDKDRFES 140


>ref|XP_010656678.1| PREDICTED: SART-1 family protein DOT2 [Vitis vinifera]
           gi|296090475|emb|CBI40671.3| unnamed protein product
           [Vitis vinifera]
          Length = 944

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 42/104 (40%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
 Frame = -3

Query: 406 MDMEWSESRYEHKQDSRFESSSPDAVYREEKMDDFEDGVGTVIATKDKGKSRDSGKHRSK 227
           MDM+WSE + E   + R    SP   Y +   DD E+                S KHRSK
Sbjct: 1   MDMDWSEPKPERSDELRDRDDSPTRDYHDGAYDDLEEN-----------GIEKSSKHRSK 49

Query: 226 DRKKERR---DHGSKDRERAKI-DLLKESEENQNELRENDHIGS 107
           DRKK RR   DH  KDRER+K  D LKE E+   +  E D + S
Sbjct: 50  DRKKSRREEKDHRGKDRERSKAGDGLKEREKETKD-SEKDRVTS 92


>emb|CAN77549.1| hypothetical protein VITISV_017244 [Vitis vinifera]
          Length = 710

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 42/104 (40%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
 Frame = -3

Query: 406 MDMEWSESRYEHKQDSRFESSSPDAVYREEKMDDFEDGVGTVIATKDKGKSRDSGKHRSK 227
           MDM+WSE + E   + R    SP   Y +   DD E+                S KHRSK
Sbjct: 1   MDMDWSEPKPERSDELRDRDDSPTRDYHDGAYDDLEEN-----------GIEKSSKHRSK 49

Query: 226 DRKKERR---DHGSKDRERAKI-DLLKESEENQNELRENDHIGS 107
           DRKK RR   DH  KDRER+K  D LKE E+   +  E D + S
Sbjct: 50  DRKKSRREEKDHRGKDRERSKAGDGLKEREKETKD-SEKDRVTS 92


>ref|XP_010679669.1| PREDICTED: SART-1 family protein DOT2 [Beta vulgaris subsp.
           vulgaris] gi|870858350|gb|KMT09868.1| hypothetical
           protein BVRB_6g128420 [Beta vulgaris subsp. vulgaris]
          Length = 961

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
 Frame = -3

Query: 406 MDMEWSESRYEHKQDSRFESSSPDAVYREEKMDDFEDGVGTVIATKDKGKSRDSGKHRSK 227
           MD + S SR+E  +D R+++ SP     E    D ++         DK +SR+S KHRSK
Sbjct: 1   MDADRSGSRHERSED-RYQADSPVRESTEGAFGDSDE--------YDKDRSRESSKHRSK 51

Query: 226 DRKKERR---DHGSKDRERAKI-DLLKESEENQNELRE 125
           D+KK RR   DH S+D++R+K  D LKE E  ++  +E
Sbjct: 52  DKKKSRREDKDHRSRDKDRSKAKDELKEREVKEDSEKE 89


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