BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00018938
         (259 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AKH05185.1| chlororespiratory reduction 4 [Hypseocharis bilob...   103   5e-20
emb|CBI38872.3| unnamed protein product [Vitis vinifera]              102   8e-20
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   102   8e-20
gb|AKH05181.1| chlororespiratory reduction 4, partial [Geranium ...    98   2e-18
dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tome...    95   2e-17
ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containi...    95   2e-17
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...    94   3e-17
gb|AKH05197.1| chlororespiratory reduction 4 [Pelargonium tetrag...    94   4e-17
gb|AKH05194.1| chlororespiratory reduction 4 [Pelargonium x hort...    94   4e-17
ref|XP_012489757.1| PREDICTED: pentatricopeptide repeat-containi...    94   4e-17
ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containi...    94   4e-17
ref|XP_010692239.1| PREDICTED: pentatricopeptide repeat-containi...    94   4e-17
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...    94   4e-17
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...    94   4e-17
gb|AKH05180.1| chlororespiratory reduction 4 [Geranium incanum]        93   7e-17
dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylv...    93   7e-17
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]    93   7e-17
gb|AKH05198.1| chlororespiratory reduction 4 [Pelargonium transv...    93   9e-17
ref|XP_010053897.1| PREDICTED: pentatricopeptide repeat-containi...    93   9e-17
ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containi...    93   9e-17

>gb|AKH05185.1| chlororespiratory reduction 4 [Hypseocharis bilobata]
          Length = 635

 Score =  103 bits (257), Expect = 5e-20
 Identities = 49/75 (65%), Positives = 57/75 (76%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           ML  A +NQPWNS  PTLLLLR CKT  DVNQIHARIITTGL+   S T KI L   SSP
Sbjct: 1   MLLCANSNQPWNSTLPTLLLLRKCKTQNDVNQIHARIITTGLINRTSLTTKIILNFISSP 60

Query: 56  HQPLVEFSRYLFFSQ 12
           H PL++F+RY+FF++
Sbjct: 61  HTPLIQFARYVFFTR 75


>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/75 (65%), Positives = 58/75 (77%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           ML SA +NQPWNS HPTL+LL   KTL DVNQIH+R+ITTG + N S T +I L  SSS 
Sbjct: 1   MLISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60

Query: 56  HQPLVEFSRYLFFSQ 12
           H+PLVEF+RYLF S+
Sbjct: 61  HKPLVEFARYLFMSR 75


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421186|ref|XP_010661651.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421189|ref|XP_010661652.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
           gi|731421191|ref|XP_010661653.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Vitis vinifera]
          Length = 635

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/75 (65%), Positives = 58/75 (77%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           ML SA +NQPWNS HPTL+LL   KTL DVNQIH+R+ITTG + N S T +I L  SSS 
Sbjct: 1   MLISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60

Query: 56  HQPLVEFSRYLFFSQ 12
           H+PLVEF+RYLF S+
Sbjct: 61  HKPLVEFARYLFMSR 75


>gb|AKH05181.1| chlororespiratory reduction 4, partial [Geranium maderense]
          Length = 626

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 47/71 (66%), Positives = 54/71 (76%)
 Frame = -3

Query: 227 SAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSPHQP 48
           SA +NQPWNS  PTL LLR+CKT   +NQIHARIITTGL+ N S T KI L+  SSPH  
Sbjct: 6   SANSNQPWNSTVPTLRLLRNCKTQNHLNQIHARIITTGLIANTSLTTKIVLSFISSPHSS 65

Query: 47  LVEFSRYLFFS 15
           LV F+RY+FFS
Sbjct: 66  LVRFARYIFFS 76


>dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tomentosiformis]
          Length = 626

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           +L  A +NQ WN  HPTL   + CKT  D++Q+HAR+ITTGLVKN   T K+ L  SSSP
Sbjct: 2   LLLVANSNQAWNLTHPTLTFSQKCKTQMDIDQVHARLITTGLVKNPFLTTKLILKFSSSP 61

Query: 56  HQPLVEFSRYLFFS 15
           H P+VEF+R+LFFS
Sbjct: 62  HTPIVEFARFLFFS 75


>ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 626

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           +L  A +NQ WN  HPTL   + CKT  D++Q+HAR+ITTGLVKN   T K+ L  SSSP
Sbjct: 2   LLLVANSNQAWNLTHPTLTFSQKCKTQMDIDQVHARLITTGLVKNPFLTTKLILKFSSSP 61

Query: 56  HQPLVEFSRYLFFS 15
           H P+VEF+R+LFFS
Sbjct: 62  HTPIVEFARFLFFS 75


>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Citrus sinensis]
           gi|641867125|gb|KDO85809.1| hypothetical protein
           CISIN_1g047120mg [Citrus sinensis]
          Length = 634

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 46/73 (63%), Positives = 52/73 (71%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           M  SA  NQP NS   TLLLLR CKTL DVNQIHAR+ITTG +KN   T K+  + SSSP
Sbjct: 1   MFVSANYNQPCNSTQSTLLLLRKCKTLNDVNQIHARMITTGFIKNTHLTTKLVASFSSSP 60

Query: 56  HQPLVEFSRYLFF 18
             PL EF+RY+FF
Sbjct: 61  CTPLTEFARYIFF 73


>gb|AKH05197.1| chlororespiratory reduction 4 [Pelargonium tetragonum]
          Length = 643

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 45/72 (62%), Positives = 53/72 (73%)
 Frame = -3

Query: 227 SAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSPHQP 48
           SA  NQPWNS  PTLLLLR CK+   VNQIHARIITTG + N S T K+ L   SSPH  
Sbjct: 6   SANWNQPWNSTLPTLLLLRKCKSQNHVNQIHARIITTGFIHNPSLTTKVILNFISSPHSS 65

Query: 47  LVEFSRYLFFSQ 12
           L++F+RY+FFS+
Sbjct: 66  LLQFARYVFFSR 77


>gb|AKH05194.1| chlororespiratory reduction 4 [Pelargonium x hortorum]
          Length = 649

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 46/72 (63%), Positives = 52/72 (72%)
 Frame = -3

Query: 227 SAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSPHQP 48
           SA  NQPWNS  PTLLLL  C +   VNQIHARIITTG + N S T KI L   SSPH P
Sbjct: 6   SANWNQPWNSTLPTLLLLPKCNSQNHVNQIHARIITTGFIHNTSLTTKIILNFISSPHTP 65

Query: 47  LVEFSRYLFFSQ 12
           L++F+RYLFFS+
Sbjct: 66  LLQFARYLFFSR 77


>ref|XP_012489757.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Gossypium raimondii]
           gi|763773983|gb|KJB41106.1| hypothetical protein
           B456_007G090700 [Gossypium raimondii]
          Length = 637

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 43/78 (55%), Positives = 55/78 (70%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           ML  A  NQPWNS  PTL LL+ C+TL DVNQIH R+ITTG +++   T KI L  S SP
Sbjct: 1   MLTCANLNQPWNSTLPTLALLQKCRTLTDVNQIHGRLITTGFIRSQVLTTKIVLTFSPSP 60

Query: 56  HQPLVEFSRYLFFSQIQY 3
             PLV+F+RY+FF+ + +
Sbjct: 61  FTPLVDFARYVFFTYLAF 78


>ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Populus euphratica]
          Length = 641

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 44/74 (59%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
 Frame = -3

Query: 236 MLASAQANQ-PWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSS 60
           ML SA  NQ PWNS  PTL+LL+ CK L D+NQIHAR++TTG +KN   T KI L+ S+S
Sbjct: 1   MLLSANLNQQPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTS 60

Query: 59  PHQPLVEFSRYLFF 18
            H PL+EF+R++FF
Sbjct: 61  LHAPLIEFARFIFF 74


>ref|XP_010692239.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Beta vulgaris subsp. vulgaris]
          Length = 645

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 43/75 (57%), Positives = 54/75 (72%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           ML  A + QPW S  PT  LL+ CKTL D+ QIHAR+ITTG +KN +FT K+ L L SSP
Sbjct: 1   MLLCANSTQPWKSTIPTFSLLQHCKTLNDIKQIHARLITTGFIKNPNFTTKLILNLCSSP 60

Query: 56  HQPLVEFSRYLFFSQ 12
           + PL++F+RYL  SQ
Sbjct: 61  YTPLIQFARYLLLSQ 75


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 44/74 (59%), Positives = 55/74 (74%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           ML  A ++Q WN  HPTL   + CKT  D++QIHA++ITTGLVKN   T K+ L LSSSP
Sbjct: 1   MLLVANSSQAWNLAHPTLTFSQKCKTQVDIDQIHAQLITTGLVKNPFLTTKLILKLSSSP 60

Query: 56  HQPLVEFSRYLFFS 15
           H P+VEF+R+LFFS
Sbjct: 61  HTPIVEFARFLFFS 74


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 44/74 (59%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
 Frame = -3

Query: 236 MLASAQANQ-PWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSS 60
           ML SA  NQ PWNS  PTL+LL+ CK L D+NQIHAR++TTG +KN   T KI L+ S+S
Sbjct: 1   MLLSANLNQQPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTS 60

Query: 59  PHQPLVEFSRYLFF 18
            H PL+EF+R++FF
Sbjct: 61  LHAPLIEFARFIFF 74


>gb|AKH05180.1| chlororespiratory reduction 4 [Geranium incanum]
          Length = 637

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 46/72 (63%), Positives = 52/72 (72%)
 Frame = -3

Query: 227 SAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSPHQP 48
           SA +NQPWNS  PTL LL  CK+   VNQIHARIITTGL+ N S T KI L   SSPH  
Sbjct: 6   SANSNQPWNSPLPTLHLLHRCKSQNHVNQIHARIITTGLISNTSLTTKIVLNFISSPHSS 65

Query: 47  LVEFSRYLFFSQ 12
           LV F+RY+FFS+
Sbjct: 66  LVRFARYIFFSR 77


>dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylvestris]
          Length = 626

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           +L  A  +Q WN  HPTL   + CKT +D++QIHAR+ITTGLVKN   T K+ L  SSSP
Sbjct: 2   LLLVANLSQAWNLTHPTLTFSQKCKTQEDIDQIHARLITTGLVKNPFLTTKLILKFSSSP 61

Query: 56  HQPLVEFSRYLFFS 15
           H P+VEF+R+LFFS
Sbjct: 62  HTPIVEFARFLFFS 75


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = -3

Query: 215 NQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSPHQPLVEF 36
           ++PWNS HPTL+LL   KTL DVNQIH+R+ITTG + N S T +I L  SSS H+PLVEF
Sbjct: 64  HKPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEF 123

Query: 35  SRYLFFSQ 12
           +RYLF S+
Sbjct: 124 ARYLFMSR 131


>gb|AKH05198.1| chlororespiratory reduction 4 [Pelargonium transvaalense]
          Length = 638

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 45/72 (62%), Positives = 52/72 (72%)
 Frame = -3

Query: 227 SAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSPHQP 48
           SA  NQPWNS  PTLLLL  C +   VNQIHARIITTG + N S T KI L   SSPH P
Sbjct: 6   SANWNQPWNSTLPTLLLLPKCNSQNHVNQIHARIITTGFIHNTSLTTKIILNFISSPHTP 65

Query: 47  LVEFSRYLFFSQ 12
           L++F+RY+FFS+
Sbjct: 66  LLQFARYVFFSR 77


>ref|XP_010053897.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Eucalyptus grandis]
          Length = 634

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           M   +  +QPWNSI PTL  +R CKT +DV+QIHAR+ITTGL++NAS T+K+ LAL SSP
Sbjct: 1   MFLVSNPSQPWNSIQPTLAHVRSCKTPRDVSQIHARMITTGLIRNASLTSKLILALCSSP 60

Query: 56  HQPLVEFSRYLFFS 15
             P+ EF+R +FF+
Sbjct: 61  DPPVAEFARRVFFA 74


>ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Nicotiana sylvestris]
          Length = 626

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 43/74 (58%), Positives = 54/74 (72%)
 Frame = -3

Query: 236 MLASAQANQPWNSIHPTLLLLRDCKTLKDVNQIHARIITTGLVKNASFTAKISLALSSSP 57
           +L  A ++Q WN  HPTL   + CKT  D++QIHAR+ITTGLVKN   T K+ L  SSSP
Sbjct: 2   LLLVANSSQAWNLTHPTLTFSQKCKTQVDIDQIHARLITTGLVKNPFLTTKLILKFSSSP 61

Query: 56  HQPLVEFSRYLFFS 15
           H P+VEF+R+LFFS
Sbjct: 62  HTPIVEFARFLFFS 75