BLASTX nr result

ID: Cinnamomum24_contig00018650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00018650
         (328 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    81   6e-27
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    91   2e-26
gb|KJB09790.1| hypothetical protein B456_001G166300 [Gossypium r...    82   7e-24
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    87   5e-17
ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putati...    68   3e-12
dbj|BAA06810.1| ORF74 (mitochondrion) [Oryza sativa Japonica Group]    67   6e-09
ref|XP_002532484.1| conserved hypothetical protein [Ricinus comm...    64   4e-08
emb|CDY67013.1| BnaUnng01800D [Brassica napus]                         59   1e-06

>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|657370789|gb|KEH16850.1| NADH-quinone oxidoreductase
           protein [Medicago truncatula]
          Length = 556

 Score = 80.9 bits (198), Expect(2) = 6e-27
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = -1

Query: 328 PLVRLASERFFRAGSRPGPTGGHLPQCKLHCSPPPEKQKI*ES 200
           PLVRLASERFFRA S PGPTGGHLPQ KLHCSPPP+KQKI ES
Sbjct: 275 PLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES 317



 Score = 66.6 bits (161), Expect(2) = 6e-27
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -2

Query: 96  EGSGYLLELRPTTTGQFRFGATPYSTIIIGVW 1
           E SGYLLELRPTTTG+FRFGATPYSTIIIGVW
Sbjct: 316 ESSGYLLELRPTTTGKFRFGATPYSTIIIGVW 347


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 91.3 bits (225), Expect(2) = 2e-26
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +3

Query: 198 LDSQIFCFSGGGEQCSLHCGRCPPVGPGLLPARKNRSLASRTS 326
           LDS+IFCFSGGGEQCSL CGRCPPVGPGLLPARKNRSLASRTS
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTS 94



 Score = 54.7 bits (130), Expect(2) = 2e-26
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +1

Query: 7  PYNNGRVRGGPKAELTGGGWSKL 75
          PYNNGRVRGGPKAELTGGGWSKL
Sbjct: 28 PYNNGRVRGGPKAELTGGGWSKL 50


>gb|KJB09790.1| hypothetical protein B456_001G166300 [Gossypium raimondii]
          Length = 571

 Score = 82.4 bits (202), Expect(2) = 7e-24
 Identities = 43/59 (72%), Positives = 46/59 (77%)
 Frame = -3

Query: 281 AGPYGRASPAMQAALFATTREAKDLRVKAENTCIDSGLMTRAXXXXXXXXXXXRKSHVR 105
           AGPYGRASPA QAALFATTR+AKD RV+AENTCIDSGLMTRA           RKSH+R
Sbjct: 297 AGPYGRASPATQAALFATTRKAKDSRVQAENTCIDSGLMTRADDGSSGRSRMMRKSHLR 355



 Score = 54.7 bits (130), Expect(2) = 7e-24
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -2

Query: 72  LRPTTTGQFRFGATPYSTIIIGVW 1
           LRPTTTGQFRFGATPYSTIIIGVW
Sbjct: 354 LRPTTTGQFRFGATPYSTIIIGVW 377


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491, partial [Sorghum bicolor]
          Length = 289

 Score = 87.0 bits (214), Expect(2) = 5e-17
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +3

Query: 180 YACIFRLDSQIFCFSGGGEQCSLHCGRCPPVGPGLLPARK 299
           YAC+FRLDS+IFCFSGGGEQCSL CGRCPPVGPGLLPAR+
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARR 278



 Score = 26.9 bits (58), Expect(2) = 5e-17
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 149 RRRPLSLDHYLCMY 190
           +R PLSLDHY C++
Sbjct: 230 KRGPLSLDHYACLF 243


>ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
           gi|223524771|gb|EEF27701.1| NADH-ubiquinone
           oxidoreductase chain, putative [Ricinus communis]
          Length = 366

 Score = 67.8 bits (164), Expect(2) = 3e-12
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = -2

Query: 102 P*EGSGYLLELRPTTTGQFRFGATPYSTIIIGVW 1
           P +G GYLLELRPTTTGQFRFGATPYSTIIIGVW
Sbjct: 23  PEKGVGYLLELRPTTTGQFRFGATPYSTIIIGVW 56



 Score = 30.0 bits (66), Expect(2) = 3e-12
 Identities = 16/27 (59%), Positives = 16/27 (59%)
 Frame = -3

Query: 167 MTRAXXXXXXXXXXXRKSHVRFPEKGV 87
           MTRA           RKSHVRFPEKGV
Sbjct: 1   MTRADDGSSGRSRMMRKSHVRFPEKGV 27


>dbj|BAA06810.1| ORF74 (mitochondrion) [Oryza sativa Japonica Group]
          Length = 74

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 38/49 (77%), Positives = 39/49 (79%)
 Frame = -3

Query: 326 TSPAS**AVLSGGKQAGPYGRASPAMQAALFATTREAKDLRVKAENTCI 180
           TSPAS   +LSG KQAGP GRASPA QAA FATTREAKD RVKAE T I
Sbjct: 27  TSPAS---LLSGRKQAGPDGRASPATQAAWFATTREAKDSRVKAEKTSI 72


>ref|XP_002532484.1| conserved hypothetical protein [Ricinus communis]
           gi|223527809|gb|EEF29908.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -1

Query: 286 SRPGPTGGHLPQCKLHCSPPPEKQKI 209
           SRPGPTGGHLPQCKLHCSPPPEKQKI
Sbjct: 63  SRPGPTGGHLPQCKLHCSPPPEKQKI 88


>emb|CDY67013.1| BnaUnng01800D [Brassica napus]
          Length = 187

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +3

Query: 24  SKGWPQSGIDRWWLVEAPVGSHSLLREPYV 113
           SKGWPQSGIDR  LVEAPVGSHSLLREPY+
Sbjct: 73  SKGWPQSGIDRGCLVEAPVGSHSLLREPYL 102


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