BLASTX nr result
ID: Cinnamomum24_contig00018529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00018529
(270 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008224935.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Pr... 60 6e-07
ref|XP_004134724.2| PREDICTED: pre-mRNA-splicing factor SYF1 [Cu... 59 1e-06
ref|XP_008439899.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Cu... 59 1e-06
ref|XP_011001120.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Po... 59 2e-06
ref|XP_010244955.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ne... 59 2e-06
ref|XP_002305003.1| transcription-coupled DNA repair family prot... 59 2e-06
ref|XP_010494110.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 58 2e-06
ref|XP_010455195.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 58 2e-06
ref|XP_006395029.1| hypothetical protein EUTSA_v10003625mg [Eutr... 58 2e-06
ref|XP_006286961.1| hypothetical protein CARUB_v10000110mg, part... 58 2e-06
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun... 58 2e-06
ref|XP_007211348.1| hypothetical protein PRUPE_ppa001514mg [Prun... 58 3e-06
ref|XP_009376832.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Py... 57 4e-06
ref|XP_008383814.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 57 4e-06
ref|XP_008371300.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 57 4e-06
ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab... 57 4e-06
ref|XP_010092624.1| Pre-mRNA-splicing factor SYF1 [Morus notabil... 57 5e-06
ref|XP_010937810.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 57 5e-06
ref|XP_010421702.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 57 5e-06
ref|XP_009129815.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Br... 57 5e-06
>ref|XP_008224935.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Prunus mume]
Length = 927
Score = 60.1 bits (144), Expect = 6e-07
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = +2
Query: 161 MTTPNTRTISSDLYPSQDDLLYEEEILRNPFSLKLW 268
M+ ++ +IS +LYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 1 MSATSSMSISQELYPSQDDLLYEEELLRNPFSLKLW 36
>ref|XP_004134724.2| PREDICTED: pre-mRNA-splicing factor SYF1 [Cucumis sativus]
gi|700193993|gb|KGN49197.1| hypothetical protein
Csa_6G517050 [Cucumis sativus]
Length = 913
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 TISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+IS DLYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 2 SISQDLYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_008439899.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Cucumis melo]
Length = 913
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 TISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+IS DLYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 2 SISQDLYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_011001120.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Populus euphratica]
Length = 908
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 TISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+IS +LYPSQDDLLYEEEILRNPFSLKLW
Sbjct: 2 SISKELYPSQDDLLYEEEILRNPFSLKLW 30
>ref|XP_010244955.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Nelumbo nucifera]
Length = 919
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 TISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+IS +LYPSQDDLLYEEEILRNPFSLKLW
Sbjct: 2 SISQELYPSQDDLLYEEEILRNPFSLKLW 30
>ref|XP_002305003.1| transcription-coupled DNA repair family protein [Populus
trichocarpa] gi|222847967|gb|EEE85514.1|
transcription-coupled DNA repair family protein [Populus
trichocarpa]
Length = 908
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +2
Query: 182 TISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+IS +LYPSQDDLLYEEEILRNPFSLKLW
Sbjct: 2 SISKELYPSQDDLLYEEEILRNPFSLKLW 30
>ref|XP_010494110.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Camelina sativa]
Length = 917
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DLLYEEEILRNPFSLKLW
Sbjct: 3 ISKDLYPSQEDLLYEEEILRNPFSLKLW 30
>ref|XP_010455195.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Camelina sativa]
Length = 918
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DLLYEEEILRNPFSLKLW
Sbjct: 3 ISKDLYPSQEDLLYEEEILRNPFSLKLW 30
>ref|XP_006395029.1| hypothetical protein EUTSA_v10003625mg [Eutrema salsugineum]
gi|557091668|gb|ESQ32315.1| hypothetical protein
EUTSA_v10003625mg [Eutrema salsugineum]
Length = 916
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DLLYEEEILRNPFSLKLW
Sbjct: 3 ISKDLYPSQEDLLYEEEILRNPFSLKLW 30
>ref|XP_006286961.1| hypothetical protein CARUB_v10000110mg, partial [Capsella rubella]
gi|482555667|gb|EOA19859.1| hypothetical protein
CARUB_v10000110mg, partial [Capsella rubella]
Length = 1050
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DLLYEEEILRNPFSLKLW
Sbjct: 135 ISKDLYPSQEDLLYEEEILRNPFSLKLW 162
>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
SYF1-like protein [Medicago truncatula]
Length = 925
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
ISSDLYPS+DDL+YEEE+LRNPFSLKLW
Sbjct: 4 ISSDLYPSEDDLVYEEELLRNPFSLKLW 31
>ref|XP_007211348.1| hypothetical protein PRUPE_ppa001514mg [Prunus persica]
gi|462407213|gb|EMJ12547.1| hypothetical protein
PRUPE_ppa001514mg [Prunus persica]
Length = 811
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +2
Query: 182 TISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+IS +LYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 2 SISQELYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_009376832.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Pyrus x bretschneideri]
Length = 919
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS +LYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 3 ISQELYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_008383814.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Malus domestica]
gi|658046004|ref|XP_008358690.1| PREDICTED:
pre-mRNA-splicing factor SYF1-like [Malus domestica]
Length = 920
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS +LYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 3 ISQELYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_008371300.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Malus domestica]
Length = 920
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS +LYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 3 ISQELYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
Length = 928
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DLLYEEE+LRNPFSLKLW
Sbjct: 3 ISKDLYPSQEDLLYEEELLRNPFSLKLW 30
>ref|XP_010092624.1| Pre-mRNA-splicing factor SYF1 [Morus notabilis]
gi|587861990|gb|EXB51813.1| Pre-mRNA-splicing factor
SYF1 [Morus notabilis]
Length = 915
Score = 57.0 bits (136), Expect = 5e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
+S +LYPSQDDLLYEEE+LRNPFSLKLW
Sbjct: 3 VSQELYPSQDDLLYEEELLRNPFSLKLW 30
>ref|XP_010937810.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like
[Elaeis guineensis]
Length = 912
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPS+DDL+YEEEILRNPFSLKLW
Sbjct: 14 ISPDLYPSEDDLVYEEEILRNPFSLKLW 41
>ref|XP_010421702.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Camelina sativa]
Length = 918
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DL+YEEEILRNPFSLKLW
Sbjct: 3 ISKDLYPSQEDLVYEEEILRNPFSLKLW 30
>ref|XP_009129815.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Brassica rapa]
gi|685277743|ref|XP_009129816.1| PREDICTED:
pre-mRNA-splicing factor SYF1 [Brassica rapa]
Length = 913
Score = 57.0 bits (136), Expect = 5e-06
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 185 ISSDLYPSQDDLLYEEEILRNPFSLKLW 268
IS DLYPSQ+DL+YEEEILRNPFSLKLW
Sbjct: 3 ISQDLYPSQEDLVYEEEILRNPFSLKLW 30