BLASTX nr result

ID: Cinnamomum24_contig00018515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00018515
         (571 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_040401510.1| hypothetical protein [Cecembia lonarensis]         43   3e-06
gb|EKB47241.1| hypothetical protein B879_04163 [Cecembia lonaren...    43   3e-06
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                42   6e-06
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    40   8e-06

>ref|WP_040401510.1| hypothetical protein [Cecembia lonarensis]
          Length = 109

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -2

Query: 564 LGVASIHDKLREIRLRWF*YVQRRPTTALLRK 469
           +GVA I  K+RE RLRWF +VQRRPT A +R+
Sbjct: 23  VGVAEIEGKMRENRLRWFGHVQRRPTDAPVRR 54



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -1

Query: 433 KG*AKKDWIEVVRIGLKK*NLFEDLAHGRLEWRNRIHVSNPNK 305
           +G  +K   E +R  L+  +L ED+   R +WR+RIH+++P +
Sbjct: 67  RGRPRKTLEETLRKDLEYLDLTEDMTQDRAQWRSRIHIADPTQ 109


>gb|EKB47241.1| hypothetical protein B879_04163 [Cecembia lonarensis LW9]
          Length = 133

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -2

Query: 564 LGVASIHDKLREIRLRWF*YVQRRPTTALLRK 469
           +GVA I  K+RE RLRWF +VQRRPT A +R+
Sbjct: 47  VGVAEIEGKMRENRLRWFGHVQRRPTDAPVRR 78



 Score = 34.7 bits (78), Expect(2) = 3e-06
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -1

Query: 433 KG*AKKDWIEVVRIGLKK*NLFEDLAHGRLEWRNRIHVSNPNK 305
           +G  +K   E +R  L+  +L ED+   R +WR+RIH+++P +
Sbjct: 91  RGRPRKTLEETLRKDLEYLDLTEDMTQDRAQWRSRIHIADPTQ 133


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 42.4 bits (98), Expect(2) = 6e-06
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = -2

Query: 570 EHLGVASIHDKLREIRLRWF*YVQRRPTTALLRK 469
           E +GVAS+ DKLRE RLRWF +V+RR   A +R+
Sbjct: 606 EKVGVASVVDKLREARLRWFGHVKRRSADAPVRR 639



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -1

Query: 433 KG*AKKDWIEVVRIGLKK*NLFEDLAHGRLEWRNRIHVSN 314
           +G  KK W EV+R  L   ++ ED+   R EWR+RI V +
Sbjct: 652 RGRPKKYWEEVIRQDLAMLHITEDMTLDRKEWRSRIKVED 691


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 40.4 bits (93), Expect(2) = 8e-06
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = -2

Query: 564 LGVASIHDKLREIRLRWF*YVQRRPTTALLRK 469
           +GVA I  K+RE  LRWF +VQRRPT A +R+
Sbjct: 536 VGVAEIEGKMRENWLRWFGHVQRRPTDAPIRR 567



 Score = 35.8 bits (81), Expect(2) = 8e-06
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = -1

Query: 439 KEKG*AKKDWIEVVRIGLKK*NLFEDLAHGRLEWRNRIHVSNPNK 305
           K +G  +K   E +R  L+  +L ED+   R +WR++IHV++P +
Sbjct: 578 KGRGRPRKTLEETLRKDLEYLDLMEDMTQDRAQWRSKIHVADPTQ 622


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