BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00018139
         (731 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   159   2e-36
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   144   4e-32
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...   144   7e-32
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...   144   7e-32
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6...   144   7e-32
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   143   9e-32
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s...   143   1e-31
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   143   1e-31
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s...   143   1e-31
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr...   143   1e-31
ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III s...   143   1e-31
ref|XP_010097238.1| DNA-directed RNA polymerase III subunit RPC6...   142   2e-31
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [...   142   2e-31
gb|KHG06283.1| DNA-directed RNA polymerase III subunit RPC6 [Gos...   142   3e-31
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              142   3e-31
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s...   142   3e-31
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun...   142   3e-31
ref|XP_012482289.1| PREDICTED: DNA-directed RNA polymerase III s...   141   3e-31
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s...   141   3e-31
ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III s...   140   6e-31

>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  159 bits (401), Expect = 2e-36
 Identities = 83/172 (48%), Positives = 102/172 (59%), Gaps = 10/172 (5%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM  EFE SKEI GG+WYVEG LD EFIKL+K++C K + KL+V T+EG+ D  +RSG
Sbjct: 81  KHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLKVATLEGITDSIKRSG 140

Query: 428 ISKSNFL------VIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFC 267
           I  +         ++K+L                       EVKS G L FS +P+GK C
Sbjct: 141 IFNTELTKQQIEEIVKAL----------------VLDNALIEVKSNGMLEFSFIPIGKVC 184

Query: 266 YHRLSRRN----PMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
           Y  + + +    P  G M SIPCGVCPRIS+CT DG ISP  CVY  KWLDF
Sbjct: 185 YKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera] gi|731402737|ref|XP_010654780.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera] gi|731402739|ref|XP_010654781.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  144 bits (364), Expect = 4e-32
 Identities = 73/167 (43%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM VEFE SKE+ GG+WYVEG LD E+IK++K+ C+K + KL+V T EG+ +   ++G
Sbjct: 83  KHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLKVATAEGISESINKTG 142

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYH---- 261
           +  +     +     R                   EV+S+G   FSS+P+G  CY     
Sbjct: 143 LCATECSTQQIAEILR----------ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNK 192

Query: 260 -RLSRRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
             L    P  G M SIPCGVCPRI++CT DG ISP +C Y  KWLDF
Sbjct: 193 GGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score =  144 bits (362), Expect = 7e-32
 Identities = 77/166 (46%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KH M VEFE SKEI GG+WY EG LD EFIK++K  CLK I KL+V T+EG+ D  +RSG
Sbjct: 79  KHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSG 138

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
             K +    +     R                   EVKS G   F+++P+GK CY  +S+
Sbjct: 139 AFKVDLTKQQIEEIVR----------AVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSK 188

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
                 P  G   S+PCGVCP+I+ CT DG ISP  CVY  KWLDF
Sbjct: 189 GGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score =  144 bits (362), Expect = 7e-32
 Identities = 77/166 (46%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KH M VEFE SKEI GG+WY EG LD EFIK++K  CLK I KL+V T+EG+ D  +RSG
Sbjct: 97  KHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSG 156

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
             K +    +     R                   EVKS G   F+++P+GK CY  +S+
Sbjct: 157 AFKVDLTKQQIEEIVR----------AVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSK 206

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
                 P  G   S+PCGVCP+I+ CT DG ISP  CVY  KWLDF
Sbjct: 207 GGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 252


>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|590615245|ref|XP_007023169.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  144 bits (362), Expect = 7e-32
 Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KH+++ EFE S EI GG+WYVEG LD E+I ++K+ C + I  L+V T+EG+ D  +RS 
Sbjct: 82  KHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLKVATLEGVTDAIKRSN 141

Query: 428 ISKSNFL------VIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFC 267
           +S+          ++K+L                       EVKS+G   F+S+P+GK C
Sbjct: 142 VSQIELSKQQIEEIVKAL----------------VLDNEVMEVKSSGTGEFASIPVGKVC 185

Query: 266 YHRLSRR----NPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
           Y  + +R     P  G M SIPCGVCP+IS CT DG ISP  CVY KKWLDF
Sbjct: 186 YKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLDF 237


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max] gi|734354912|gb|KHN13797.1| DNA-directed
           RNA polymerase III subunit RPC6 [Glycine soja]
          Length = 239

 Score =  143 bits (361), Expect = 9e-32
 Identities = 79/166 (47%), Positives = 100/166 (60%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM  EFE SKEI GG WY +G+LD +FI L+KD+CLK+I + +V T +G+ ++ R+SG
Sbjct: 84  KHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWSRKSG 143

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLS- 252
           +    F V  + +       T+             EVKSTG   FSSVP+G+ CY   S 
Sbjct: 144 V----FNVEVTTQQIDEILRTLVLDDEIV------EVKSTGFGDFSSVPVGRICYRCKSK 193

Query: 251 ---RRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
              R     G M SIPCGVCPRI+ CT DG ISP  CVY +KWLDF
Sbjct: 194 GGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239


>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis] gi|743806633|ref|XP_010927733.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis] gi|743806635|ref|XP_010927734.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis] gi|743806637|ref|XP_010927735.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc6 [Elaeis
           guineensis]
          Length = 237

 Score =  143 bits (360), Expect = 1e-31
 Identities = 73/161 (45%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           K YM +EFE SKEI GGSWY +G LD+EFI+++++ CLKHI++L++ TME ++   + S 
Sbjct: 83  KIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCLKHIERLQIATMEAIYKSIQESR 142

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRL-S 252
           + K    + + +                       E+KSTG   FS VP GK CY  L  
Sbjct: 143 VFKVECTMQQIVEIVN----------AMVLDKEIEELKSTGIGDFSKVPSGKICYKSLKG 192

Query: 251 RRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWL 129
           R  P  G + SIPCGVCPRI ECT DG ISP  CVY  KWL
Sbjct: 193 REGPKIGALSSIPCGVCPRIGECTPDGIISPKTCVYYNKWL 233


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  143 bits (360), Expect = 1e-31
 Identities = 72/167 (43%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM VEFE SKE+ GG+WYVEG LD E+IK++K+ C++ + KL+V T EG+ +   ++G
Sbjct: 83  KHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKVATAEGISESINKTG 142

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYH---- 261
           +  +     +     R                   EV+S+G   FSS+P+G  CY     
Sbjct: 143 LCATECSTQQIAEILR----------ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNK 192

Query: 260 -RLSRRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
             L    P  G M SIPCGVCPRI++CT DG ISP  C Y  KWLDF
Sbjct: 193 GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239


>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Citrus sinensis]
          Length = 233

 Score =  143 bits (360), Expect = 1e-31
 Identities = 77/166 (46%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KH M VEFE SKEI GG+WY EG LD EFIK++K  CLK I KL+V T+EG+ D  +RSG
Sbjct: 78  KHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSG 137

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
             K +    +     R                   EVKS G   F+++P+GK CY  +S+
Sbjct: 138 AFKVDLTKQQIEEIVR----------ALVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSK 187

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
                 P  G + SIPCGVCP+I+ CT DG ISP  CVY   WLDF
Sbjct: 188 GGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233


>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
           gi|557529238|gb|ESR40488.1| hypothetical protein
           CICLE_v10026399mg [Citrus clementina]
           gi|641825965|gb|KDO45213.1| hypothetical protein
           CISIN_1g026766mg [Citrus sinensis]
           gi|641825966|gb|KDO45214.1| hypothetical protein
           CISIN_1g026766mg [Citrus sinensis]
          Length = 233

 Score =  143 bits (360), Expect = 1e-31
 Identities = 77/166 (46%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KH M VEFE SKEI GG+WY EG LD EFIK++K  CLK I KL+V T+EG+ D  +RSG
Sbjct: 78  KHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSG 137

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
             K +    +     R                   EVKS G   F+++P+GK CY  +S+
Sbjct: 138 AFKVDLTKQQIEEIVR----------ALVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSK 187

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
                 P  G + SIPCGVCP+I+ C  DG ISP  CVY  KWLDF
Sbjct: 188 GGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233


>ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Jatropha
           curcas] gi|317106726|dbj|BAJ53222.1| JHL06P13.1
           [Jatropha curcas] gi|643729216|gb|KDP37096.1|
           hypothetical protein JCGZ_06152 [Jatropha curcas]
          Length = 235

 Score =  143 bits (360), Expect = 1e-31
 Identities = 76/171 (44%), Positives = 98/171 (57%), Gaps = 9/171 (5%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           K+YM  EFE SKEI GG+WYVEG LD  FI ++KD C K I+KL+V T+E + D+  R+G
Sbjct: 81  KYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVATVEAVTDFINRTG 140

Query: 428 ISKSNFL------VIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFC 267
           +S  +        ++K+L                       EVKS G   F+S+P+GK C
Sbjct: 141 VSTVHLTKQQIEEILKAL----------------VLDNKVTEVKSNGMGEFASIPVGKVC 184

Query: 266 YHRL---SRRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
           Y  +   S  +P  G M SIPCGVCPRI  CT +G ISP  CVY  KWL+F
Sbjct: 185 YKSIGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235


>ref|XP_010097238.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
           gi|587878298|gb|EXB67305.1| DNA-directed RNA polymerase
           III subunit RPC6 [Morus notabilis]
          Length = 238

 Score =  142 bits (359), Expect = 2e-31
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHY+  EFE + EI GG+WY  GK+D   I ++KD CLK I K  V T+EG+ D  R+SG
Sbjct: 84  KHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQCLKWIYKQRVATLEGILDAIRKSG 143

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCY---HR 258
           IS      ++     R                   EVKS G   F S+P+GK CY    +
Sbjct: 144 ISNVELTTVQIEELVR----------ALVLDNEVVEVKSNGMGEFDSIPVGKVCYKSTSK 193

Query: 257 LSRRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
            SR +P  G M SIPCGVCPRIS+CT DG ISP  C Y  +WLDF
Sbjct: 194 GSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLDF 238


>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
          Length = 234

 Score =  142 bits (359), Expect = 2e-31
 Identities = 76/166 (45%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KH M VEFE SK+I GG+WY EG LD EFIK++K  CLK I KL+V T+EG+ D  +RSG
Sbjct: 79  KHLMAVEFEPSKDISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSG 138

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
             K +    +     R                   EVKS G   F+++P+GK CY  +S+
Sbjct: 139 AFKVDLTKQQIEEIVR----------AVVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSK 188

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
                 P  G   S+PCGVCP+I+ CT DG ISP  CVY  KWLDF
Sbjct: 189 GGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234


>gb|KHG06283.1| DNA-directed RNA polymerase III subunit RPC6 [Gossypium arboreum]
          Length = 330

 Score =  142 bits (357), Expect = 3e-31
 Identities = 74/172 (43%), Positives = 99/172 (57%), Gaps = 10/172 (5%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM+ EFE S EI GG+WYVEG LD E+I ++K+ C + I  L+V T+EG+ D  +RS 
Sbjct: 175 KHYMSAEFEPSNEITGGAWYVEGSLDKEYINVLKEQCWRKIYGLKVATLEGIADAIKRSN 234

Query: 428 ISKSNFL------VIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFC 267
           +S+          ++K+L                       EV+STG   F+S+P+GK C
Sbjct: 235 VSQIELSKQQVEEIVKAL----------------VLDNEVMEVRSTGTGEFASIPVGKAC 278

Query: 266 YHRLSRRN----PMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
           Y    +R     P  G + SIPCGVCP+IS CT DG ISP+ C Y KKWL+F
Sbjct: 279 YKCAGKRGYGGEPKLGALASIPCGVCPQISRCTPDGIISPITCEYYKKWLEF 330


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  142 bits (357), Expect = 3e-31
 Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM VEFE SKE+ GG+WYVEG LD E+IK++K  C++ + KL+V T EG+ +   ++G
Sbjct: 144 KHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTG 203

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYH---- 261
           +  +     +     R                   EV+S+G   FSS+P+G  CY     
Sbjct: 204 LCATECSTQQIAEILR----------ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNK 253

Query: 260 -RLSRRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
             L    P  G M SIPCGVCPRI++CT DG ISP  C Y  KWLDF
Sbjct: 254 GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 300


>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  142 bits (357), Expect = 3e-31
 Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM VEFE SKE+ GG+WYVEG LD E+IK++K  C++ + KL+V T EG+ +   ++G
Sbjct: 83  KHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTG 142

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYH---- 261
           +  +     +     R                   EV+S+G   FSS+P+G  CY     
Sbjct: 143 LCATECSTQQIAEILR----------ALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNK 192

Query: 260 -RLSRRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
             L    P  G M SIPCGVCPRI++CT DG ISP  C Y  KWLDF
Sbjct: 193 GGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239


>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
           gi|462404542|gb|EMJ10006.1| hypothetical protein
           PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score =  142 bits (357), Expect = 3e-31
 Identities = 78/166 (46%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM  EFE SKE+ GG WY  G LD  +I  +KD   K I +L+V T+EG+ D  ++SG
Sbjct: 81  KHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQLKVATLEGISDEVKKSG 140

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
           I K++F   +     R                   EVKSTG   F S P+GK CY   S+
Sbjct: 141 IFKTSFTKQQIEEILR----------VLVLDKRVTEVKSTGMGEFGSFPVGKVCYKSTSK 190

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
               R P  G M SIPCGVCPRIS+CT DG ISP  CVY  KWLDF
Sbjct: 191 GGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236


>ref|XP_012482289.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Gossypium
           raimondii] gi|763761578|gb|KJB28832.1| hypothetical
           protein B456_005G071700 [Gossypium raimondii]
          Length = 230

 Score =  141 bits (356), Expect = 3e-31
 Identities = 73/172 (42%), Positives = 99/172 (57%), Gaps = 10/172 (5%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM+ EFE S EI GG+WYVEG LD E+I ++K+ C + I  L+V T+EG+ D  +RS 
Sbjct: 75  KHYMSAEFEPSNEITGGAWYVEGSLDKEYINVLKEQCWRKIYGLKVATLEGIADAIKRSN 134

Query: 428 ISKSNFL------VIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFC 267
           +S+          ++K+L                       EV+STG   F+S+P+GK C
Sbjct: 135 VSQIELSKQQVEEIVKAL----------------VLDNEVMEVRSTGTGEFASIPVGKAC 178

Query: 266 YHRLSRRN----PMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
           Y    +R     P  G + S+PCGVCP+IS CT DG ISP+ C Y KKWL+F
Sbjct: 179 YKCAGKRGYGGEPKLGALASVPCGVCPQISRCTPDGIISPITCEYYKKWLEF 230


>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
           acuminata subsp. malaccensis]
           gi|695003580|ref|XP_009386160.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like [Musa acuminata
           subsp. malaccensis]
          Length = 237

 Score =  141 bits (356), Expect = 3e-31
 Identities = 76/161 (47%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           K +M VEFE SKE+ GGSWY EG LD EFI +++ +CLKHI++L+V T+E ++     SG
Sbjct: 83  KIFMAVEFEPSKEVSGGSWYSEGSLDTEFINILRKMCLKHIEELKVATIEDIWKSISASG 142

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRL-S 252
           + K    + + L   R                   E+KSTG   FS+V  GK CY  L  
Sbjct: 143 VLKVACTMQQVLEIVR----------ALALDKEIEELKSTGVGEFSTVQTGKVCYRSLRG 192

Query: 251 RRNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWL 129
           R  P  G + SIPCGVCPRISECT DG ISP  CVY  KWL
Sbjct: 193 REAPRVGHLSSIPCGVCPRISECTPDGVISPKTCVYYNKWL 233


>ref|XP_008218752.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Prunus mume]
          Length = 236

 Score =  140 bits (354), Expect = 6e-31
 Identities = 78/166 (46%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = -1

Query: 608 KHYMTVEFEASKEIIGGSWYVEGKLDVEFIKLMKDLCLKHIDKLEVVTMEGLFDYFRRSG 429
           KHYM  EFE SKE+ GG WY  G LD  +I  +KD   K I +L+V T+EG+ D  ++SG
Sbjct: 81  KHYMASEFEPSKELTGGDWYSNGTLDKYYITCVKDGFAKIIYQLKVATLEGISDEVKKSG 140

Query: 428 ISKSNFLVIKSLRYCRHWFWTMXXXXXXXXXXXXXEVKSTGKLVFSSVPLGKFCYHRLSR 249
           I K++F   +     R                   EVKSTG   F+S P+GK CY   S+
Sbjct: 141 IFKTSFTRPQIEEILR----------VLVLDKRITEVKSTGMGEFASFPVGKVCYKSTSK 190

Query: 248 ----RNPMAGIMLSIPCGVCPRISECTTDGFISPVNCVYIKKWLDF 123
               R P  G M SIPCGVCPRIS+CT DG ISP  CVY  KWLDF
Sbjct: 191 GGTKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236