BLASTX nr result

ID: Cinnamomum24_contig00017750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00017750
         (400 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010247642.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...    60   6e-07
ref|XP_010247641.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...    60   6e-07

>ref|XP_010247642.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like isoform X2 [Nelumbo
           nucifera]
          Length = 640

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -2

Query: 354 CCNREGFKETNETVSKTRPDTRCGCLAGMKVRLNGFGKWKVLEVXXXXXXXXNPTKA--- 184
           CC+REGFK   ET ++ RP+TR GC A ++V+L    KWKV EV         P      
Sbjct: 69  CCSREGFKRQRET-NRIRPETRTGCPAMLRVKLVDSKKWKVTEVSIEHNHLITPASVQFY 127

Query: 183 TSHRHLDDKVGKGLKLDETTGQQVQKTCEDYVTDAEGNSHSAFEER 46
            SH+       K L+LD  T     K  + +  D   +   +F+ER
Sbjct: 128 KSHKSNSFATKKKLQLDCETVMLTNKLLQSFTLDLWDHETLSFDER 173


>ref|XP_010247641.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Nelumbo
           nucifera]
          Length = 666

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = -2

Query: 354 CCNREGFKETNETVSKTRPDTRCGCLAGMKVRLNGFGKWKVLEVXXXXXXXXNPTKA--- 184
           CC+REGFK   ET ++ RP+TR GC A ++V+L    KWKV EV         P      
Sbjct: 95  CCSREGFKRQRET-NRIRPETRTGCPAMLRVKLVDSKKWKVTEVSIEHNHLITPASVQFY 153

Query: 183 TSHRHLDDKVGKGLKLDETTGQQVQKTCEDYVTDAEGNSHSAFEER 46
            SH+       K L+LD  T     K  + +  D   +   +F+ER
Sbjct: 154 KSHKSNSFATKKKLQLDCETVMLTNKLLQSFTLDLWDHETLSFDER 199


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