BLASTX nr result

ID: Cinnamomum24_contig00017575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00017575
         (629 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN08531.1| hypothetical protein AMTR_s00017p00027420 [Ambore...    60   1e-06
ref|YP_009049652.1| hypothetical protein (mitochondrion) [Capsic...    59   2e-06

>gb|ERN08531.1| hypothetical protein AMTR_s00017p00027420 [Amborella trichopoda]
          Length = 136

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = -1

Query: 329 LTCYEFGMLRSLLLEKVAPKQFHDKEMEGLRTFYPGDMGEDMLERMVFKPWLELSM 162
           +T  EFGM+R+ +LE+V P+ F+ KE+E L +FYP   GE + + +V KPWL L++
Sbjct: 1   MTQEEFGMVRAFILERVKPRDFNLKEIEWLLSFYPSPEGEQIKDHLVIKPWLALNV 56


>ref|YP_009049652.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|667751772|gb|AIG89859.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667751924|gb|AIG90010.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 543

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
 Frame = -1

Query: 629 LEFAKRFMCDGVRTDLFPISVRIVRSLVYGVAASMFSTLGIRSLRV*YRLRGASFRVYSR 450
           +EFAK+F    ++ DL PIS+R++ S    +     S      + V  RL GA FRV SR
Sbjct: 277 VEFAKKFWVKSMQIDLSPISLRLLLSCRTTLGLCTVSNKYPIGISVLQRLGGAGFRVRSR 336

Query: 449 RGVPPMSNRRWRRHYLLMHSPSGIYPLPVEFWLTFPERG-VLTCYEFGMLRSLLLEKVAP 273
             +    ++RW R       P+  +PLP+E+W+    RG  L  Y  G +   L +++ P
Sbjct: 337 --LYSTQSKRWERLKAAAQKPNRSHPLPLEYWI---GRGKPLNPYLKGKIVDFLRKELKP 391

Query: 272 KQFHDKEMEGLRTFYPGDM----GEDMLERMVFKPWLEL 168
           K+            +P +M      D+LE  V   W+++
Sbjct: 392 KEIR---------LFPEEMVFDKERDILEHTVIHNWVKM 421


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