BLASTX nr result

ID: Cinnamomum24_contig00017565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00017565
         (629 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255016.1| PREDICTED: RING-H2 finger protein ATL65 [Nel...    68   4e-09
ref|XP_008775786.1| PREDICTED: RING-H2 finger protein ATL65-like...    61   5e-07
ref|XP_010941913.1| PREDICTED: RING-H2 finger protein ATL65-like...    60   1e-06
ref|XP_009416796.1| PREDICTED: RING-H2 finger protein ATL65 [Mus...    59   3e-06

>ref|XP_010255016.1| PREDICTED: RING-H2 finger protein ATL65 [Nelumbo nucifera]
          Length = 396

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = +2

Query: 401 TMSSPASAPGYEIEWPAPPHGSRRSSSALRLDFNPPLIAMVAVVGTAFLIVVYFRLIS 574
           T  +PA +P YE EW   P    +S + L +DF+PPLIAMV VV TAFL+V YFRLIS
Sbjct: 4   TTMTPAESPEYEFEWGPSPATLGQSPTGLPVDFSPPLIAMVVVVATAFLVVTYFRLIS 61


>ref|XP_008775786.1| PREDICTED: RING-H2 finger protein ATL65-like [Phoenix dactylifera]
          Length = 394

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +2

Query: 404 MSSPASAPGYEIEW-PAPPHGSRRSSSALRLDFNPPLIAMVAVVGTAFLIVVYFRLIS 574
           M++PA    YE EW P+P       ++ +  DF+PPLIAMVAVVGTAFLIV+Y R++S
Sbjct: 1   MAAPAKEAEYEFEWGPSPAITGGSPAARITPDFSPPLIAMVAVVGTAFLIVLYARILS 58


>ref|XP_010941913.1| PREDICTED: RING-H2 finger protein ATL65-like [Elaeis guineensis]
          Length = 396

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +2

Query: 404 MSSPASAPGYEIEW-PAPPHGSRRSSSALRLDFNPPLIAMVAVVGTAFLIVVYFRLIS 574
           M++PA    Y+ EW P+P       ++ +  DF+PPLIAMVAVVGTAFLIV+Y R++S
Sbjct: 1   MAAPAKEAEYDFEWSPSPSITGGSPAARITPDFSPPLIAMVAVVGTAFLIVLYARILS 58


>ref|XP_009416796.1| PREDICTED: RING-H2 finger protein ATL65 [Musa acuminata subsp.
           malaccensis]
          Length = 421

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = +2

Query: 401 TMSSPASAPG--YEIEW---PAPPHGSRRSSSALRLDFNPPLIAMVAVVGTAFLIVVYFR 565
           TM++P  AP   YE  W   P    GS  +   +  DF+PPLIAMVAVVGTAFLIV+Y R
Sbjct: 18  TMAAPPIAPSAAYEFAWGPSPVTTGGSEPNLPRITPDFSPPLIAMVAVVGTAFLIVLYAR 77

Query: 566 LIS 574
           ++S
Sbjct: 78  ILS 80


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