BLASTX nr result
ID: Cinnamomum24_contig00016689
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00016689
(664 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010278916.1| PREDICTED: mediator of RNA polymerase II tra... 119 1e-24
ref|XP_008793404.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 112 1e-22
ref|XP_009420227.1| PREDICTED: mediator of RNA polymerase II tra... 111 3e-22
ref|XP_010921240.1| PREDICTED: mediator of RNA polymerase II tra... 110 5e-22
ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II tra... 110 5e-22
ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II tra... 110 5e-22
ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II tra... 110 7e-22
ref|XP_009384951.1| PREDICTED: mediator of RNA polymerase II tra... 110 7e-22
ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II tra... 110 9e-22
ref|XP_010653099.1| PREDICTED: mediator of RNA polymerase II tra... 107 7e-21
ref|XP_002264843.2| PREDICTED: mediator of RNA polymerase II tra... 107 7e-21
ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II tra... 102 1e-19
ref|XP_006842623.1| PREDICTED: mediator of RNA polymerase II tra... 99 3e-18
ref|XP_012090974.1| PREDICTED: mediator of RNA polymerase II tra... 98 4e-18
ref|XP_010653098.1| PREDICTED: mediator of RNA polymerase II tra... 96 1e-17
emb|CBI31143.3| unnamed protein product [Vitis vinifera] 94 8e-17
ref|XP_002519970.1| hypothetical protein RCOM_1322820 [Ricinus c... 93 1e-16
ref|XP_010113041.1| hypothetical protein L484_022767 [Morus nota... 91 7e-16
gb|EEE67830.1| hypothetical protein OsJ_25606 [Oryza sativa Japo... 91 7e-16
gb|EEC82696.1| hypothetical protein OsI_27360 [Oryza sativa Indi... 91 7e-16
>ref|XP_010278916.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Nelumbo nucifera]
Length = 1322
Score = 119 bits (298), Expect = 1e-24
Identities = 56/82 (68%), Positives = 67/82 (81%)
Frame = -3
Query: 251 MASESSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFT 72
M +ES+ FE RVL TVK QER+DPPL+WAMEVSKC++E G LP+PELG VLVS+LCF+
Sbjct: 1 MVAESTRFEDRVLETVKCCQERKDPPLVWAMEVSKCVREAGFSLPSPELGVVLVSSLCFS 60
Query: 71 NNNPTLWKFVEQGICSRLLSPL 6
NNNP LWKF++Q I S LLS L
Sbjct: 61 NNNPYLWKFLDQAISSGLLSSL 82
>ref|XP_008793404.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 33A-like [Phoenix dactylifera]
Length = 1317
Score = 112 bits (281), Expect = 1e-22
Identities = 49/77 (63%), Positives = 65/77 (84%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
D E+RV+ VK+S+ER DPPL A+EV +C+QEKGLG P+PELGHVLVSNLCF++N P+L
Sbjct: 14 DLERRVMEAVKASEERGDPPLARAVEVGRCVQEKGLGFPSPELGHVLVSNLCFSHNMPSL 73
Query: 53 WKFVEQGICSRLLSPLH 3
WK ++Q + SRL++PLH
Sbjct: 74 WKLLDQAMASRLIAPLH 90
>ref|XP_009420227.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Musa acuminata subsp. malaccensis]
Length = 1325
Score = 111 bits (278), Expect = 3e-22
Identities = 46/79 (58%), Positives = 66/79 (83%)
Frame = -3
Query: 239 SSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNP 60
+++ E+RV+ TVK+S+ER DPPL+ A+E ++C+QE GLGLPNPEL HVLVSNLCF NN P
Sbjct: 10 AAELERRVMATVKASEERGDPPLLRAVEAARCVQEAGLGLPNPELAHVLVSNLCFANNTP 69
Query: 59 TLWKFVEQGICSRLLSPLH 3
++WK ++Q + R++SP+H
Sbjct: 70 SMWKLLDQAMSCRVVSPIH 88
>ref|XP_010921240.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Elaeis guineensis]
Length = 1020
Score = 110 bits (276), Expect = 5e-22
Identities = 48/77 (62%), Positives = 63/77 (81%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
D E+RV+ VK+S+ER DPPL A+EV +C+QEKGLG P+PELG VLVSNLCF++N P+L
Sbjct: 14 DLERRVMAAVKASEERGDPPLARAVEVGRCVQEKGLGFPSPELGEVLVSNLCFSHNTPSL 73
Query: 53 WKFVEQGICSRLLSPLH 3
WK ++Q + SRL+ PLH
Sbjct: 74 WKLLDQAVASRLIYPLH 90
>ref|XP_010921239.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Elaeis guineensis]
Length = 1331
Score = 110 bits (276), Expect = 5e-22
Identities = 48/77 (62%), Positives = 63/77 (81%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
D E+RV+ VK+S+ER DPPL A+EV +C+QEKGLG P+PELG VLVSNLCF++N P+L
Sbjct: 14 DLERRVMAAVKASEERGDPPLARAVEVGRCVQEKGLGFPSPELGEVLVSNLCFSHNTPSL 73
Query: 53 WKFVEQGICSRLLSPLH 3
WK ++Q + SRL+ PLH
Sbjct: 74 WKLLDQAVASRLIYPLH 90
>ref|XP_010921237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1352
Score = 110 bits (276), Expect = 5e-22
Identities = 48/77 (62%), Positives = 63/77 (81%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
D E+RV+ VK+S+ER DPPL A+EV +C+QEKGLG P+PELG VLVSNLCF++N P+L
Sbjct: 14 DLERRVMAAVKASEERGDPPLARAVEVGRCVQEKGLGFPSPELGEVLVSNLCFSHNTPSL 73
Query: 53 WKFVEQGICSRLLSPLH 3
WK ++Q + SRL+ PLH
Sbjct: 74 WKLLDQAVASRLIYPLH 90
>ref|XP_009384953.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1330
Score = 110 bits (275), Expect = 7e-22
Identities = 47/78 (60%), Positives = 66/78 (84%)
Frame = -3
Query: 236 SDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPT 57
+D E+RV+ VK+++ER DPPL+ A+E ++C+QE+GLGLPNPELG VLVSNLCF NNNP+
Sbjct: 11 ADLERRVMVAVKAAEERGDPPLLRAVEAARCVQERGLGLPNPELGRVLVSNLCFANNNPS 70
Query: 56 LWKFVEQGICSRLLSPLH 3
LWK ++Q + S ++SP+H
Sbjct: 71 LWKLLDQTMASCVVSPIH 88
>ref|XP_009384951.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1331
Score = 110 bits (275), Expect = 7e-22
Identities = 47/78 (60%), Positives = 66/78 (84%)
Frame = -3
Query: 236 SDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPT 57
+D E+RV+ VK+++ER DPPL+ A+E ++C+QE+GLGLPNPELG VLVSNLCF NNNP+
Sbjct: 11 ADLERRVMVAVKAAEERGDPPLLRAVEAARCVQERGLGLPNPELGRVLVSNLCFANNNPS 70
Query: 56 LWKFVEQGICSRLLSPLH 3
LWK ++Q + S ++SP+H
Sbjct: 71 LWKLLDQTMASCVVSPIH 88
>ref|XP_010938078.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Elaeis guineensis]
Length = 1330
Score = 110 bits (274), Expect = 9e-22
Identities = 47/77 (61%), Positives = 64/77 (83%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
+ E+RV+ VK+S+ER DPPL A+EV +C+QEKGLG P+PELGHVLVSNLCF++N P+
Sbjct: 14 ELERRVMEAVKASEERGDPPLARAVEVGRCVQEKGLGFPSPELGHVLVSNLCFSHNTPSF 73
Query: 53 WKFVEQGICSRLLSPLH 3
WK ++Q + SRL++PLH
Sbjct: 74 WKLLDQAMSSRLIAPLH 90
>ref|XP_010653099.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Vitis vinifera]
Length = 1310
Score = 107 bits (266), Expect = 7e-21
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = -3
Query: 251 MASESSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFT 72
MAS ++ FE+RV +K QERR+PPLIWA E+ KC+ GLGLP+ ELG VLVS LCF
Sbjct: 3 MASNATLFEERVKEALKRCQERREPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFA 62
Query: 71 NNNPTLWKFVEQGICSRLLSPLH 3
+N P++WKF++ + SRLLSPLH
Sbjct: 63 HNCPSMWKFLDHALSSRLLSPLH 85
>ref|XP_002264843.2| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Vitis vinifera]
Length = 1332
Score = 107 bits (266), Expect = 7e-21
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = -3
Query: 251 MASESSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFT 72
MAS ++ FE+RV +K QERR+PPLIWA E+ KC+ GLGLP+ ELG VLVS LCF
Sbjct: 3 MASNATLFEERVKEALKRCQERREPPLIWATEMVKCLDSAGLGLPSVELGQVLVSQLCFA 62
Query: 71 NNNPTLWKFVEQGICSRLLSPLH 3
+N P++WKF++ + SRLLSPLH
Sbjct: 63 HNCPSMWKFLDHALSSRLLSPLH 85
>ref|XP_008782719.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Phoenix dactylifera]
Length = 1331
Score = 102 bits (255), Expect = 1e-19
Identities = 46/77 (59%), Positives = 62/77 (80%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
D E+RV+ VK+S+ER DP L A+EV + ++EKGLG P+PELGHVLVSNLCF++N P+L
Sbjct: 14 DLERRVMAAVKASEERGDPLLARAVEVGRSVREKGLGFPSPELGHVLVSNLCFSHNTPSL 73
Query: 53 WKFVEQGICSRLLSPLH 3
WK ++Q + SRL+ PLH
Sbjct: 74 WKLLDQVMASRLIYPLH 90
>ref|XP_006842623.1| PREDICTED: mediator of RNA polymerase II transcription subunit 33A
[Amborella trichopoda] gi|548844709|gb|ERN04298.1|
hypothetical protein AMTR_s00077p00181380 [Amborella
trichopoda]
Length = 1314
Score = 98.6 bits (244), Expect = 3e-18
Identities = 42/74 (56%), Positives = 58/74 (78%)
Frame = -3
Query: 227 EQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTLWK 48
E ++ G ++ S ER+DPPLIWAMEVS +QE G+GLP+ ELGH+LVS+LC+ NN P LWK
Sbjct: 2 EDQISGILRHSLERKDPPLIWAMEVSSALQESGVGLPSSELGHLLVSHLCWANNTPLLWK 61
Query: 47 FVEQGICSRLLSPL 6
++E + S+L+S L
Sbjct: 62 YIEHAVSSQLVSSL 75
>ref|XP_012090974.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Jatropha curcas]
Length = 1325
Score = 97.8 bits (242), Expect = 4e-18
Identities = 39/84 (46%), Positives = 64/84 (76%)
Frame = -3
Query: 254 VMASESSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCF 75
V + + ++R++ T+KS Q+R++PPL+ AMEV+KC+ G+ +P+P+LG V+VS LCF
Sbjct: 3 VETKKEREMKERIIETIKSCQQRQEPPLVCAMEVAKCLISLGITMPSPDLGEVMVSYLCF 62
Query: 74 TNNNPTLWKFVEQGICSRLLSPLH 3
NN+P++WKF++Q + S LL P+H
Sbjct: 63 NNNHPSVWKFLQQALSSHLLCPIH 86
>ref|XP_010653098.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Vitis vinifera]
Length = 1330
Score = 96.3 bits (238), Expect = 1e-17
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = -3
Query: 251 MASESSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFT 72
MAS + F QRV+ +KS QERR+PPLIW EV +C++ GL LP+ ELG VLVS LCFT
Sbjct: 1 MASYPTLFNQRVVEALKSCQERREPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFT 60
Query: 71 NNNPTLWKFVEQGICSRLLSPLH 3
N+P+ WKF++ I LLS H
Sbjct: 61 QNSPSRWKFLDHAISCGLLSHFH 83
>emb|CBI31143.3| unnamed protein product [Vitis vinifera]
Length = 1342
Score = 93.6 bits (231), Expect = 8e-17
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = -3
Query: 230 FEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTLW 51
F QRV+ +KS QERR+PPLIW EV +C++ GL LP+ ELG VLVS LCFT N+P+ W
Sbjct: 19 FNQRVVEALKSCQERREPPLIWVTEVVECVESAGLVLPSVELGQVLVSQLCFTQNSPSRW 78
Query: 50 KFVEQGICSRLLSPLH 3
KF++ I LLS H
Sbjct: 79 KFLDHAISCGLLSHFH 94
>ref|XP_002519970.1| hypothetical protein RCOM_1322820 [Ricinus communis]
gi|223540734|gb|EEF42294.1| hypothetical protein
RCOM_1322820 [Ricinus communis]
Length = 135
Score = 93.2 bits (230), Expect = 1e-16
Identities = 39/75 (52%), Positives = 59/75 (78%)
Frame = -3
Query: 227 EQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTLWK 48
E ++L T+K+ ++R++ PL+ MEV+KC+ G+ +P+PELG VLVS LCF NN+P+LWK
Sbjct: 12 EDKILETIKACEQRQECPLVMGMEVAKCLVSLGISVPSPELGQVLVSYLCFQNNHPSLWK 71
Query: 47 FVEQGICSRLLSPLH 3
F++Q + SRL+S LH
Sbjct: 72 FLQQSLSSRLVSSLH 86
>ref|XP_010113041.1| hypothetical protein L484_022767 [Morus notabilis]
gi|587948994|gb|EXC35212.1| hypothetical protein
L484_022767 [Morus notabilis]
Length = 1321
Score = 90.5 bits (223), Expect = 7e-16
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = -3
Query: 242 ESSDFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNN 63
E S++E+RV+ TVK ++R + PL+WAMEV K +P+P LG VLVS+LCF NN
Sbjct: 5 EWSEYERRVVETVKWCEDRNESPLVWAMEVGKLADR----VPSPALGQVLVSHLCFLNNR 60
Query: 62 PTLWKFVEQGICSRLLSPLH 3
P+LWKF+EQ + S LLSP H
Sbjct: 61 PSLWKFLEQSLSSGLLSPFH 80
>gb|EEE67830.1| hypothetical protein OsJ_25606 [Oryza sativa Japonica Group]
Length = 1275
Score = 90.5 bits (223), Expect = 7e-16
Identities = 38/77 (49%), Positives = 57/77 (74%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
+ E+RV+ +K+S+ R D PL+WA+EV++ + +G GLP+ +L +LVSNLCF +N+P+L
Sbjct: 10 ELERRVMAALKASEARGDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSL 69
Query: 53 WKFVEQGICSRLLSPLH 3
WK V + SRLL PLH
Sbjct: 70 WKLVGHAVASRLLCPLH 86
>gb|EEC82696.1| hypothetical protein OsI_27360 [Oryza sativa Indica Group]
Length = 1361
Score = 90.5 bits (223), Expect = 7e-16
Identities = 38/77 (49%), Positives = 57/77 (74%)
Frame = -3
Query: 233 DFEQRVLGTVKSSQERRDPPLIWAMEVSKCIQEKGLGLPNPELGHVLVSNLCFTNNNPTL 54
+ E+RV+ +K+S+ R D PL+WA+EV++ + +G GLP+ +L +LVSNLCF +N+P+L
Sbjct: 10 ELERRVMAALKASEARGDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSL 69
Query: 53 WKFVEQGICSRLLSPLH 3
WK V + SRLL PLH
Sbjct: 70 WKLVGHAVASRLLCPLH 86