BLASTX nr result

ID: Cinnamomum24_contig00016245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00016245
         (311 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010939730.1| PREDICTED: SNW/SKI-interacting protein-like ...    60   4e-07
ref|XP_010939731.1| PREDICTED: SNW/SKI-interacting protein-like ...    57   6e-06
ref|XP_002324443.2| chromatin family protein [Populus trichocarp...    56   8e-06

>ref|XP_010939730.1| PREDICTED: SNW/SKI-interacting protein-like isoform X1 [Elaeis
           guineensis]
          Length = 621

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -2

Query: 133 FVSHTDFTMAALKELLPPARXXXXSFYDHSKDPWFQDRFNSS 8
           F+  +D  M ALKELLPPA+    SFYDHSKDPWF+DR++SS
Sbjct: 19  FIPRSDPLMEALKELLPPAKSTGASFYDHSKDPWFKDRYSSS 60


>ref|XP_010939731.1| PREDICTED: SNW/SKI-interacting protein-like isoform X2 [Elaeis
           guineensis]
          Length = 595

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 109 MAALKELLPPARXXXXSFYDHSKDPWFQDRFNSS 8
           M ALKELLPPA+    SFYDHSKDPWF+DR++SS
Sbjct: 1   MEALKELLPPAKSTGASFYDHSKDPWFKDRYSSS 34


>ref|XP_002324443.2| chromatin family protein [Populus trichocarpa]
           gi|550318383|gb|EEF03008.2| chromatin family protein
           [Populus trichocarpa]
          Length = 610

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -2

Query: 109 MAALKELLPPARXXXXSFYDHSKDPWFQDRFNSSE 5
           MAALKELLPPA+    ++YDHS DPWF+ RF+SSE
Sbjct: 1   MAALKELLPPAKSTSATYYDHSNDPWFKQRFSSSE 35


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