BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00015923
         (1625 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   854   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   839   0.0  
ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   838   0.0  
gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sin...   835   0.0  
gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sin...   833   0.0  
ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   832   0.0  
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...   832   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   831   0.0  
ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   830   0.0  
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   829   0.0  
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...   828   0.0  
ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   828   0.0  
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              827   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   827   0.0  
gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium r...   827   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   827   0.0  
ref|XP_006857036.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   827   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   825   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   825   0.0  
ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   823   0.0  

>ref|XP_010273705.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
            [Nelumbo nucifera]
          Length = 956

 Score =  854 bits (2206), Expect = 0.0
 Identities = 408/517 (78%), Positives = 460/517 (88%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LGR KWRVN++VL VV++IWA GG +AGLVDREDIPIP KPDSED +E+++W+W++RK K
Sbjct: 440  LGRTKWRVNRKVLGVVESIWARGGNMAGLVDREDIPIPEKPDSEDLIEMQKWKWNMRKTK 499

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERHA RCDIELKLSVARK++DEEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 500  KINRERHAQRCDIELKLSVARKIKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 559

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG++GLRWLKIHLANLYAGGV+KLSYD RL FVENHLDD+FDSA++P+DG RW
Sbjct: 560  EFAEGRPLGKAGLRWLKIHLANLYAGGVDKLSYDDRLDFVENHLDDIFDSADKPIDGNRW 619

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WLNAEDPFQCLAAC+NLS+ALK             HQDGSCNGLQHYAALGR  L AA V
Sbjct: 620  WLNAEDPFQCLAACINLSEALKSSSPHTAISHLPIHQDGSCNGLQHYAALGRYQLEAAAV 679

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV  IM+ D + DP TDP ALLA +LIDQVDRKLVKQTVMTSV
Sbjct: 680  NLVAGEKPADVYSEIAARVHSIMKMDAEKDPTTDPTALLAKVLIDQVDRKLVKQTVMTSV 739

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHIT+++LLF A+CYAA VTLTA+ EMFQ+ARSIM WLS+C
Sbjct: 740  YGVTYVGAREQIKRRLEEKGHITNDRLLFSAACYAAKVTLTALEEMFQAARSIMGWLSDC 799

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY+K +RHLVRTSLQVL+LQR+G LV+V+RQRTAFPP
Sbjct: 800  AKVIASENQPVRWTTPLGLPVVQPYLKPQRHLVRTSLQVLALQREGDLVEVKRQRTAFPP 859

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDVDRMN ILR+KFVELY MPILE
Sbjct: 860  NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDRMNQILREKFVELYDMPILE 919

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
             LLESF+ SFP L+FPPLPD GDF+L+ VLESPYFFN
Sbjct: 920  RLLESFQVSFPLLTFPPLPDRGDFDLKEVLESPYFFN 956


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score =  839 bits (2168), Expect = 0.0
 Identities = 399/517 (77%), Positives = 456/517 (88%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VLSV+++IW SGG +AGLVDR D+PIP KP SED  E+++W+WSVRKAK
Sbjct: 493  LGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAK 552

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVAR+M+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSD+CRG+L
Sbjct: 553  KINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVL 612

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANL++GGVEKLS+DGRLAFVENHL ++FDSAE P++G RW
Sbjct: 613  EFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRW 672

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+ALK             HQDGSCNGLQHYAALGR++L AA V
Sbjct: 673  WLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAV 732

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP   P ALLA ILIDQVDRKLVKQTVMTSV
Sbjct: 733  NLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSV 792

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++ LF A+CYAA VTLTA+GE+F++ARSIM WL +C
Sbjct: 793  YGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDC 852

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K ERHL+RTSLQVL+LQR+GK V++++QRTAFPP
Sbjct: 853  AKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVEIRKQRTAFPP 912

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDVD MN ILR+KFVELY MPILE
Sbjct: 913  NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPILE 972

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+TS+P LSFPPLP+ G+F+LE VLESPYFFN
Sbjct: 973  NLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1009


>ref|XP_012445978.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Gossypium
            raimondii] gi|763786877|gb|KJB53873.1| hypothetical
            protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score =  838 bits (2165), Expect = 0.0
 Identities = 398/517 (76%), Positives = 456/517 (88%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVN +VL+VV++IWASGG +AGLVDR DIPIP KP SED+ EI++W+WSVRKA 
Sbjct: 456  LGSTKWRVNNKVLAVVESIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKAN 515

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARKM +EEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 516  KVNRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 575

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLGRSGL WLKIHLANLY+GGVEKLS+DGRLAFV+NHLD++FDSAE P++G RW
Sbjct: 576  EFAEGRPLGRSGLHWLKIHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRW 635

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAACMNLS+ALK             HQDGSCNGLQHYAALGRD+L AA V
Sbjct: 636  WLTAEDPFQCLAACMNLSEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAV 695

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP T+PNALLA +LIDQVDRKLVKQTVMTSV
Sbjct: 696  NLVAGEKPADVYSEIAVRVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSV 755

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++LLF A+CY A VTL A+GE+FQ+AR+IM WL +C
Sbjct: 756  YGVTFVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDC 815

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K+ERHL+RT+LQVL+LQR+G  V+V++QRTAFPP
Sbjct: 816  AKVIASENQPVRWTTPLGLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPP 875

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL+FAGVHDS+WTHACDV++MN ILR+KFVELY MP+LE
Sbjct: 876  NFVHSLDGSHMMMTAVACRDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLE 935

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESFETS+P L FPPLP+ G+F+L  VL+SPYFFN
Sbjct: 936  NLLESFETSYPTLVFPPLPERGNFDLREVLKSPYFFN 972


>gb|KDO62286.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
            gi|641843387|gb|KDO62287.1| hypothetical protein
            CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score =  835 bits (2156), Expect = 0.0
 Identities = 397/517 (76%), Positives = 455/517 (88%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VLSV+++IW SGG +AGLVDR D+ IP KP SED  E+++W+WSVRKAK
Sbjct: 496  LGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAK 555

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVAR+M+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSD+CRG+L
Sbjct: 556  KINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVL 615

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANL++GGVEKLS+DGRLAFVENHL ++FDSAE P++G RW
Sbjct: 616  EFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRW 675

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+ALK             HQDGSCNGLQHYAALGR++L AA V
Sbjct: 676  WLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAV 735

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP   P ALLA ILIDQVDRKLVKQTVMTSV
Sbjct: 736  NLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSV 795

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++ LF A+CYAA VTLTA+GE+F++ARSIM WL +C
Sbjct: 796  YGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDC 855

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K ERHL+RTSLQVL+LQR+G LV++++QRTAFPP
Sbjct: 856  AKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPP 915

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDVD MN ILR+KFVELY MP+LE
Sbjct: 916  NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLE 975

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+TS+P LSFPPLP+ G+F+LE VLESPYFFN
Sbjct: 976  NLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1012


>gb|KDO62285.1| hypothetical protein CISIN_1g001795mg [Citrus sinensis]
          Length = 1012

 Score =  833 bits (2153), Expect = 0.0
 Identities = 396/517 (76%), Positives = 455/517 (88%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VLSV+++IW SGG +AGLVDR D+ IP KP SED  E+++W+WSVRKAK
Sbjct: 496  LGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAK 555

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVAR+M+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSD+CRG+L
Sbjct: 556  KINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVL 615

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANL++GGVEKLS+DGRLAFVENHL ++FDSAE P++G RW
Sbjct: 616  EFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRW 675

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+ALK             HQDGSCNGLQHYAALGR+++ AA V
Sbjct: 676  WLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTVEAAAV 735

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP   P ALLA ILIDQVDRKLVKQTVMTSV
Sbjct: 736  NLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSV 795

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++ LF A+CYAA VTLTA+GE+F++ARSIM WL +C
Sbjct: 796  YGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDC 855

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K ERHL+RTSLQVL+LQR+G LV++++QRTAFPP
Sbjct: 856  AKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPP 915

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDVD MN ILR+KFVELY MP+LE
Sbjct: 916  NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLE 975

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+TS+P LSFPPLP+ G+F+LE VLESPYFFN
Sbjct: 976  NLLESFQTSYPTLSFPPLPERGNFDLEEVLESPYFFN 1012


>ref|XP_008243031.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Prunus mume]
          Length = 976

 Score =  832 bits (2148), Expect = 0.0
 Identities = 395/517 (76%), Positives = 451/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VLSVV++IWA GG +AGLV+RED+P+P K  SED  EI++W+WSVRKAK
Sbjct: 460  LGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAK 519

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+LRCD ELKLSVARKM+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 520  KINQERHSLRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 579

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANLYAGGVEKLSY+GRLAFV+NH+DD+FDSA  PV+G RW
Sbjct: 580  EFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRW 639

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDP QCLAAC+NLS+AL              HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 640  WLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAV 699

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL+  +KPADVYS IA RV +IM+RD   DP T PNALLA IL++Q+DRKLVKQTVMTSV
Sbjct: 700  NLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSV 759

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKG ITD++LLF A+CYAA VTL A+GE+FQ+AR IM+WL +C
Sbjct: 760  YGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDC 819

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K+ERHL+RTSLQVL+LQR+   VD+++QRTAFPP
Sbjct: 820  AKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPP 879

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTH CDVD+MN ILR+KFVELY MPILE
Sbjct: 880  NFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILE 939

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            +LLESF+ S+P L+FPPLP+ GDF+L  VLESPYFFN
Sbjct: 940  SLLESFQASYPALTFPPLPERGDFDLLQVLESPYFFN 976


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
            gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  832 bits (2148), Expect = 0.0
 Identities = 394/517 (76%), Positives = 453/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VL+VV++IWASGG +AGLVDR DIPIP KP SED+ E ++W+WSVRKA 
Sbjct: 462  LGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKAN 521

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARKM +EEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 522  KINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 581

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLGRSGL WLKIHLANL+AGGVEKLS+DGRLAFV+NHLDD+FDSAE P++G RW
Sbjct: 582  EFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRW 641

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS++LK             HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 642  WLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAV 701

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP T+PNA LA +LIDQVDRKLVKQTVMTSV
Sbjct: 702  NLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSV 761

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD+++LF A+CY A VTL A+GE+FQ+AR+IM WL +C
Sbjct: 762  YGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDC 821

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPV+WTTPLGLPV+QPY K+ERHL+RTSLQVL+LQR+G  V+V++QRTAFPP
Sbjct: 822  AKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRKQRTAFPP 881

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDV++MN ILR+KFVELY MP+LE
Sbjct: 882  NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLE 941

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NL ES +TS+P L FPPLP+ G+F+L  VL+SPYFFN
Sbjct: 942  NLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 978


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Fragaria
            vesca subsp. vesca]
          Length = 973

 Score =  831 bits (2146), Expect = 0.0
 Identities = 389/517 (75%), Positives = 453/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWR+NK+VL+VV++IWA GG +AGLVDRED+P+P KP SED  EI++WRWS RKAK
Sbjct: 457  LGSTKWRINKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAK 516

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVAR+M+DE+GFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 517  KLNQERHSQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 576

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANLY+GGVEKLSYDGR++FV+NH+DD+FDSA  PV+G RW
Sbjct: 577  EFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRW 636

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDP QCLAAC+NLS+AL              HQDGSCNGLQHYAALGRD+L AA V
Sbjct: 637  WLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAV 696

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV DIM+RD   DP T+PNALLA +L++Q+DRKLVKQTVMTSV
Sbjct: 697  NLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSV 756

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKG ITD++LLF A+CYAA VTL A+GE+FQ+AR IM+WL +C
Sbjct: 757  YGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDC 816

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K+ERHL+RTSLQVL+LQR+  LVDV++QRTAFPP
Sbjct: 817  AKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPP 876

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAG+ FAGVHDS+WTHACDVD+MN ILR+ FVELY  PILE
Sbjct: 877  NFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILE 936

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+ ++P L+FPPLP+ GDF+L+ VL+SPYFFN
Sbjct: 937  NLLESFQAAYPELTFPPLPERGDFDLQEVLKSPYFFN 973


>ref|XP_010904633.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
            [Elaeis guineensis]
          Length = 894

 Score =  830 bits (2144), Expect = 0.0
 Identities = 399/517 (77%), Positives = 448/517 (86%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVN+ +L VV+ IW+ GG +AGLVDR DIP+P + DSED++EI++WRW VRK K
Sbjct: 378  LGSTKWRVNRPILDVVEGIWSKGGGIAGLVDRVDIPVPERSDSEDSVEIRKWRWRVRKVK 437

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N+E HA RCD ELKLSVARKMRDEEGFYYPH+LDFRGRAYPMH HLNHLSSDLCRGIL
Sbjct: 438  KANNEMHAQRCDTELKLSVARKMRDEEGFYYPHNLDFRGRAYPMHSHLNHLSSDLCRGIL 497

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANLY GGV KLSYDGRLAFVENHL D+FDSA  P++G+RW
Sbjct: 498  EFAEGRPLGKSGLRWLKIHLANLYGGGVGKLSYDGRLAFVENHLHDIFDSAANPIEGDRW 557

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WLNAEDPFQCLAAC+NLSDALK             HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 558  WLNAEDPFQCLAACINLSDALKSSSPTEAISHIPIHQDGSCNGLQHYAALGRDSLEAAAV 617

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKP DVYSGIA RV DIMR+D   DP T+P ALLA  L+DQVDRKLVKQTVMTSV
Sbjct: 618  NLVAGEKPGDVYSGIAARVMDIMRKDSARDPTTNPTALLAKALVDQVDRKLVKQTVMTSV 677

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKG ITD++LLF ASCYAA VTL A+GEMFQ+ARSIM WL++C
Sbjct: 678  YGVTFVGAREQIKRRLEEKGLITDDRLLFTASCYAAKVTLDALGEMFQAARSIMKWLADC 737

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SE+QPVRWTTPLGLPV+QPY   ERHL+RTSLQVL+LQR+G  V V+RQ++AFPP
Sbjct: 738  AKVIASEDQPVRWTTPLGLPVVQPYKNCERHLIRTSLQVLALQREGHSVSVKRQKSAFPP 797

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTAI+C +AGLHFAGVHDS+WTHACDVDRMN ILR++FVELY +PILE
Sbjct: 798  NFVHSLDGSHMMMTAISCKNAGLHFAGVHDSFWTHACDVDRMNQILREQFVELYNIPILE 857

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLE F+TSFP LSFPPLPD G+F+L+ VL SPYFFN
Sbjct: 858  NLLEDFQTSFPTLSFPPLPDRGNFDLKKVLGSPYFFN 894


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  829 bits (2142), Expect = 0.0
 Identities = 394/517 (76%), Positives = 450/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VLSVV++IWA GG +AGLV+RED+P+P K  SED  EI++W+WSVRKAK
Sbjct: 460  LGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAK 519

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARKM+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 520  KINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 579

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANLYAGGVEKLSY+GRLAFV+NH+DD+FDSA  PV+G RW
Sbjct: 580  EFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRW 639

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDP QCLAAC+NLS+AL              HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 640  WLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAV 699

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL+  +KPADVYS IA RV +IM+RD   DP T PNALLA IL++Q+DRKLVKQTVMTSV
Sbjct: 700  NLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSV 759

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKG ITD++LLF A+CYAA VTL A+GE+FQ+AR IM+WL +C
Sbjct: 760  YGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDC 819

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K+ERHL+RTSLQVL+LQR+   VD+++QRTAFPP
Sbjct: 820  AKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPP 879

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTH CDVD+MN ILR+KFVELY MPILE
Sbjct: 880  NFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILE 939

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            +LLESF+ S+P L+FPPLP+ GDF+L  VLESPYFFN
Sbjct: 940  SLLESFQASYPALTFPPLPERGDFDLLQVLESPYFFN 976


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
            gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  828 bits (2140), Expect = 0.0
 Identities = 394/518 (76%), Positives = 454/518 (87%), Gaps = 1/518 (0%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VL+VV++IWASGG +AGLVDR DIPIP KP SED+ E ++W+WSVRKA 
Sbjct: 340  LGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKAN 399

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARKM +EEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 400  KINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 459

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLGRSGL WLKIHLANL+AGGVEKLS+DGRLAFV+NHLDD+FDSAE P++G RW
Sbjct: 460  EFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRW 519

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS++LK             HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 520  WLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAV 579

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP T+PNA LA +LIDQVDRKLVKQTVMTSV
Sbjct: 580  NLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSV 639

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD+++LF A+CY A VTL A+GE+FQ+AR+IM WL +C
Sbjct: 640  YGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDC 699

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQG-KLVDVQRQRTAFP 367
            AKVI SENQPV+WTTPLGLPV+QPY K+ERHL+RTSLQVL+LQR+G  +V+V++QRTAFP
Sbjct: 700  AKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVVEVRKQRTAFP 759

Query: 366  PNFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPIL 187
            PNF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDV++MN ILR+KFVELY MP+L
Sbjct: 760  PNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVL 819

Query: 186  ENLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            ENL ES +TS+P L FPPLP+ G+F+L  VL+SPYFFN
Sbjct: 820  ENLFESVQTSYPSLVFPPLPERGNFDLREVLKSPYFFN 857


>ref|XP_009366215.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Pyrus x
            bretschneideri]
          Length = 972

 Score =  828 bits (2138), Expect = 0.0
 Identities = 392/517 (75%), Positives = 448/517 (86%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VL+VV++IWA GG +AGLVDRED+P+P KP  E   EI++W+WSVRKAK
Sbjct: 456  LGSTKWRVNKKVLNVVESIWARGGNIAGLVDREDVPVPDKPPLEGLTEIQEWKWSVRKAK 515

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+LRCD ELKLSVARKM+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 516  KINQERHSLRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 575

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANLYAGGVEKLSY+ R AFV++H+DD+FDSA  PV+G RW
Sbjct: 576  EFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEERHAFVDHHIDDIFDSATNPVNGNRW 635

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDP QCLAAC+NLS+AL              HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 636  WLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAV 695

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM RD   DP T PNALLA +L++Q+DRKLVKQTVMTSV
Sbjct: 696  NLVAGEKPADVYSEIAARVHEIMERDSNKDPTTSPNALLARVLVNQIDRKLVKQTVMTSV 755

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKG ITD++LLF A+CYAA VTL A+GE+FQ+AR IM WL +C
Sbjct: 756  YGVTYVGAREQIKRRLEEKGFITDDRLLFTAACYAAKVTLAALGEIFQAARGIMGWLGDC 815

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K ERHL+RTSLQVL+LQR+   +DV++QRTAFPP
Sbjct: 816  AKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQRESNSIDVRKQRTAFPP 875

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTHACDVD+MN ILR+KF+ELY MPILE
Sbjct: 876  NFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHACDVDQMNEILREKFIELYSMPILE 935

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+ S+P L+FPPLP+ GDF+L+ VLESPYFFN
Sbjct: 936  NLLESFQASYPALTFPPLPERGDFDLQEVLESPYFFN 972


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  827 bits (2137), Expect = 0.0
 Identities = 393/517 (76%), Positives = 449/517 (86%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWR+N+RVLSVV++IWA GG + GLVDRE++P+P KP +ED  EI+ W+W+ RKAK
Sbjct: 292  LGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAK 351

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+LRCD E+KLSVARKM+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 352  KINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 411

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKI LANLYAGGVEKLSYDGRLAFV+NHLDDVFDSA+ P++G RW
Sbjct: 412  EFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRW 471

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+AL+             HQDGSCNGLQHYAALGR+SL A+ V
Sbjct: 472  WLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAV 531

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP TDP ALLA +LI QVDRKLVKQTVMTSV
Sbjct: 532  NLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSV 591

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT +GAREQIKRRL EKG ITD +LLF A+CYAA VTL A+GE+FQ+AR IM WL  C
Sbjct: 592  YGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGEC 651

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPV+WTTPLGLPVIQPY K+ERHL+RTSLQVL+LQR+G +V +++QRTAFPP
Sbjct: 652  AKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPP 711

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTHACDVD+MN ILR+KFVELY MPILE
Sbjct: 712  NFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILE 771

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+TS P L+FPPLPD G+F+L  VLESPYFFN
Sbjct: 772  NLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  827 bits (2137), Expect = 0.0
 Identities = 393/517 (76%), Positives = 449/517 (86%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWR+N+RVLSVV++IWA GG + GLVDRE++P+P KP +ED  EI+ W+W+ RKAK
Sbjct: 463  LGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAK 522

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+LRCD E+KLSVARKM+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 523  KINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 582

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKI LANLYAGGVEKLSYDGRLAFV+NHLDDVFDSA+ P++G RW
Sbjct: 583  EFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRW 642

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+AL+             HQDGSCNGLQHYAALGR+SL A+ V
Sbjct: 643  WLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAV 702

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP TDP ALLA +LI QVDRKLVKQTVMTSV
Sbjct: 703  NLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSV 762

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT +GAREQIKRRL EKG ITD +LLF A+CYAA VTL A+GE+FQ+AR IM WL  C
Sbjct: 763  YGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGEC 822

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPV+WTTPLGLPVIQPY K+ERHL+RTSLQVL+LQR+G +V +++QRTAFPP
Sbjct: 823  AKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPP 882

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTHACDVD+MN ILR+KFVELY MPILE
Sbjct: 883  NFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILE 942

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+TS P L+FPPLPD G+F+L  VLESPYFFN
Sbjct: 943  NLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979


>gb|KJB53874.1| hypothetical protein B456_009G009300 [Gossypium raimondii]
          Length = 972

 Score =  827 bits (2136), Expect = 0.0
 Identities = 393/515 (76%), Positives = 452/515 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVN +VL+VV++IWASGG +AGLVDR DIPIP KP SED+ EI++W+WSVRKA 
Sbjct: 456  LGSTKWRVNNKVLAVVESIWASGGNIAGLVDRNDIPIPEKPYSEDSTEIQEWKWSVRKAN 515

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARKM +EEGFYYPH+LDFRGRAYPMHPHLNHLSSDLCRG+L
Sbjct: 516  KVNRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVL 575

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLGRSGL WLKIHLANLY+GGVEKLS+DGRLAFV+NHLD++FDSAE P++G RW
Sbjct: 576  EFAEGRPLGRSGLHWLKIHLANLYSGGVEKLSHDGRLAFVDNHLDEIFDSAENPINGNRW 635

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAACMNLS+ALK             HQDGSCNGLQHYAALGRD+L AA V
Sbjct: 636  WLTAEDPFQCLAACMNLSEALKSTSPHSMISYLPIHQDGSCNGLQHYAALGRDNLEAAAV 695

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   DP T+PNALLA +LIDQVDRKLVKQTVMTSV
Sbjct: 696  NLVAGEKPADVYSEIAVRVHNIMKRDSNKDPATNPNALLAKLLIDQVDRKLVKQTVMTSV 755

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++LLF A+CY A VTL A+GE+FQ+AR+IM WL +C
Sbjct: 756  YGVTFVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLAALGELFQAARNIMGWLGDC 815

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K+ERHL+RT+LQVL+LQR+G  V+V++QRTAFPP
Sbjct: 816  AKVIASENQPVRWTTPLGLPVVQPYYKSERHLIRTTLQVLALQREGNSVEVRKQRTAFPP 875

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL+FAGVHDS+WTHACDV++MN ILR+KFVELY MP+LE
Sbjct: 876  NFVHSLDGSHMMMTAVACRDAGLYFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLE 935

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYF 79
            NLLESFETS+P L FPPLP+ G+F+L+ VL   +F
Sbjct: 936  NLLESFETSYPTLVFPPLPERGNFDLQTVLACTFF 970


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  827 bits (2136), Expect = 0.0
 Identities = 394/517 (76%), Positives = 453/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNK+VLSV+++IW SGG +AGLVDR D+ IP KP SED  E+++W+WSVRKAK
Sbjct: 496  LGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAK 555

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVAR+M+DEEGFYYPH+LDFRGRAYPMHPHLNHLSSD+CRG+L
Sbjct: 556  KINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVL 615

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRWLKIHLANL++GGVEKLS+DGRLAFVENHL ++FDSAE P++G RW
Sbjct: 616  EFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRW 675

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NL++ALK             HQDGSCNGLQHYAALGR++L AA V
Sbjct: 676  WLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAV 735

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYS IA RV +IM+RD   D    P ALLA ILIDQVDRKLVKQTVMTSV
Sbjct: 736  NLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMTSV 795

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++ LF A+CYAA VTLTA+GE+F++ARSIM WL +C
Sbjct: 796  YGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDC 855

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SENQPVRWTTPLGLPV+QPY K ERHL+RTSLQVL+LQR+G LV++++QRTAFPP
Sbjct: 856  AKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPP 915

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGLHFAGVHDS+WTHACDVD MN ILR+KFVELY MP+LE
Sbjct: 916  NFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLE 975

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+TS+P LSFP LP+ G+F+LE VLESPYFFN
Sbjct: 976  NLLESFQTSYPTLSFPSLPERGNFDLEEVLESPYFFN 1012


>ref|XP_006857036.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Amborella
            trichopoda] gi|548861119|gb|ERN18503.1| hypothetical
            protein AMTR_s00065p00022170 [Amborella trichopoda]
          Length = 987

 Score =  827 bits (2135), Expect = 0.0
 Identities = 396/517 (76%), Positives = 449/517 (86%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNKR+L VV+ +WA GG +AGLVDRED+ +P KPD+ED MEI++WRWSV+KAK
Sbjct: 471  LGSTKWRVNKRILDVVNRVWARGGGIAGLVDREDVLLPEKPDTEDEMEIRKWRWSVKKAK 530

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K NSERH+ RCD+ELKLSVARKMR+EEGFYYPH+LDFRGRAYPMHPHLNHL SDLCRGIL
Sbjct: 531  KVNSERHSQRCDLELKLSVARKMREEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 590

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGLRW KIHLANLYA GV+KLSYDGRLAFVENHLDD+FDSAERP++G+RW
Sbjct: 591  EFAEGRPLGKSGLRWSKIHLANLYACGVDKLSYDGRLAFVENHLDDIFDSAERPLEGKRW 650

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WLNAEDPFQCLAACMNL +ALK             HQDGSCNGLQHYAALGRD LGAA V
Sbjct: 651  WLNAEDPFQCLAACMNLFEALKSPTPENVISHMPVHQDGSCNGLQHYAALGRDRLGAAAV 710

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYSGIA RV +IM+RD +  P ++PNA LA  L+DQVDRKLVKQTVMTSV
Sbjct: 711  NLVAGEKPADVYSGIAARVLEIMKRDSEKGPASNPNAFLARALVDQVDRKLVKQTVMTSV 770

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT +GAR+QI RRL+E+GHITD+  LFRASCYAA VTLTA+GE FQ+AR+IM+WL +C
Sbjct: 771  YGVTYIGARDQICRRLKERGHITDDSQLFRASCYAAKVTLTALGETFQAARNIMSWLGDC 830

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AKVI SEN+PVRWTTPLGLPV+QPY K  RHLV+TSLQVL+LQR+   V V+RQRTAF P
Sbjct: 831  AKVIASENEPVRWTTPLGLPVVQPYRKFARHLVKTSLQVLALQRESNSVMVKRQRTAFAP 890

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTAIAC   GL+FAGVHDSYWTHACDVD MN ILR+KFVELY MPILE
Sbjct: 891  NFVHSLDGSHMMMTAIACKKIGLNFAGVHDSYWTHACDVDEMNWILREKFVELYSMPILE 950

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLE F+TSFP L FP +P+ GDF+L +VLESPYFFN
Sbjct: 951  NLLEGFQTSFPTLVFPAVPERGDFDLRDVLESPYFFN 987


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score =  825 bits (2131), Expect = 0.0
 Identities = 392/517 (75%), Positives = 451/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVNKRVLSVVD IWASGGR+A LVDRED+PIP +PD+ED  EIK+W+W V+ AK
Sbjct: 515  LGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAK 574

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K NSERH+ RCDIELKL+VAR+M+DE+GF+YPH+LDFRGRAYPMHP+LNHL SDLCRGIL
Sbjct: 575  KENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 634

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EFAEGRPLG+SGL+WLKIHLANLYAGGV+KLSY+GR+AF ENHLDD+FDSA+RP++G RW
Sbjct: 635  EFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRW 694

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WLNAEDPFQCLAAC+NLS+AL+             HQDGSCNGLQHYAALGRD LGAA V
Sbjct: 695  WLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAV 754

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKPADVYSGIA RV DIMRRD + DPET PNA+ A ILI+QVDRKLVKQTVMTSV
Sbjct: 755  NLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMTSV 814

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT +GAR+QIKRRL+E+  I D+  LF ASCYAA  TLTA+GEMF++ARSIM+WL +C
Sbjct: 815  YGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLGDC 874

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AK+I SENQPVRWTTPLGLPV+QPY K  RHL++TSLQVL+LQR+   V V+RQRTAFPP
Sbjct: 875  AKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 934

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC  AGL+FAGVHDSYWTHACD+D MN ILR+KFVELY  PILE
Sbjct: 935  NFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILREKFVELYEKPILE 994

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLESF+ SFP L+FPPLP+ GDF+L  VL+SPYFFN
Sbjct: 995  NLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score =  825 bits (2130), Expect = 0.0
 Identities = 389/517 (75%), Positives = 450/517 (87%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVN+R+L VV+ IW SGG +AGLVDREDIPIP KP S+D  EI++W+WSVRKAK
Sbjct: 366  LGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAK 425

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARK++DEEGFYYPH+LDFRGRAYPMHPHL HLSSDLCRG+L
Sbjct: 426  KINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVL 485

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EF EGRPLG+SGLRWLKIHLANLY+GGVEKLS+DGRLAFVENHL ++FDSA+ PV+G+RW
Sbjct: 486  EFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRW 545

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+AL              HQDGSCNGLQHYAALGRD+L AA V
Sbjct: 546  WLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAV 605

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKP+DVYS IA RV +I+RRD   DP T+P+ALLA IL+DQVDRKLVKQTVMTSV
Sbjct: 606  NLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSV 665

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++LLF A+CY A VTLTA+GE+FQ+AR IM+WL +C
Sbjct: 666  YGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDC 725

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AK+I SE+QPV+WTTPLGLPV+QPY KTERHL++TSLQ+L+LQR+G  V V++QRTAFPP
Sbjct: 726  AKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRTAFPP 785

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTHA DVD MN ILR+KFVELY MPILE
Sbjct: 786  NFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNMPILE 845

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLE F+TS+P L FPPLP+ G+F+L+ VL SPYFFN
Sbjct: 846  NLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882


>ref|XP_011018068.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Populus
            euphratica]
          Length = 983

 Score =  823 bits (2125), Expect = 0.0
 Identities = 389/517 (75%), Positives = 449/517 (86%)
 Frame = -3

Query: 1623 LGRAKWRVNKRVLSVVDNIWASGGRVAGLVDREDIPIPVKPDSEDAMEIKQWRWSVRKAK 1444
            LG  KWRVN+R+L VV+ IW SGG +AGLVDREDIPIP KP S+D  EI++W+WSVRKAK
Sbjct: 467  LGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAK 526

Query: 1443 KCNSERHALRCDIELKLSVARKMRDEEGFYYPHSLDFRGRAYPMHPHLNHLSSDLCRGIL 1264
            K N ERH+ RCD ELKLSVARK++DEEGFYYPH+LDFRGRAYPMHPHL HLSSDLCRG+L
Sbjct: 527  KINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVL 586

Query: 1263 EFAEGRPLGRSGLRWLKIHLANLYAGGVEKLSYDGRLAFVENHLDDVFDSAERPVDGERW 1084
            EF EGRPLG+SGLRWLKIHLANLY+GGVEKLS+DGRLAFVENHL ++FDSA+ PV+G+RW
Sbjct: 587  EFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRW 646

Query: 1083 WLNAEDPFQCLAACMNLSDALKXXXXXXXXXXXXXHQDGSCNGLQHYAALGRDSLGAAQV 904
            WL AEDPFQCLAAC+NLS+AL              HQDGSCNGLQHYAALGRDSL AA V
Sbjct: 647  WLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAV 706

Query: 903  NLISCEKPADVYSGIADRVRDIMRRDCKGDPETDPNALLAIILIDQVDRKLVKQTVMTSV 724
            NL++ EKP+DVYS IA RV +I+RRD   DP T+P+ALLA IL+DQVDRKLVKQTVMTSV
Sbjct: 707  NLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSV 766

Query: 723  YGVTQVGAREQIKRRLEEKGHITDNKLLFRASCYAANVTLTAIGEMFQSARSIMTWLSNC 544
            YGVT VGAREQIKRRLEEKGHITD++LLF A+CY A VTLTA+GE+FQ+AR IM+WL +C
Sbjct: 767  YGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDC 826

Query: 543  AKVIGSENQPVRWTTPLGLPVIQPYMKTERHLVRTSLQVLSLQRQGKLVDVQRQRTAFPP 364
            AK+I SE+QPV+WTTPLGLPV+QPY K ERHL++TSLQ+L+LQR+G  V V++QRTAFPP
Sbjct: 827  AKIIASEDQPVQWTTPLGLPVVQPYYKRERHLIKTSLQILALQREGSSVQVRKQRTAFPP 886

Query: 363  NFIHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDRMNLILRQKFVELYRMPILE 184
            NF+HSLDGSHMMMTA+AC DAGL FAGVHDS+WTHA DVD MN ILR+KFVELY MPILE
Sbjct: 887  NFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHARDVDLMNRILREKFVELYNMPILE 946

Query: 183  NLLESFETSFPGLSFPPLPDLGDFNLENVLESPYFFN 73
            NLLE F+TS+P L FPPLP+ G+F+L+ VL SPYFFN
Sbjct: 947  NLLEDFQTSYPTLKFPPLPERGNFDLQKVLRSPYFFN 983