BLASTX nr result

ID: Cinnamomum24_contig00014849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00014849
         (385 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009775127.1| PREDICTED: RING-H2 finger protein ATL80-like...    58   2e-06
ref|XP_009604464.1| PREDICTED: RING-H2 finger protein ATL80-like...    58   2e-06
gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]                 57   6e-06

>ref|XP_009775127.1| PREDICTED: RING-H2 finger protein ATL80-like [Nicotiana sylvestris]
          Length = 184

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -3

Query: 383 TWLGSHSSCPSCRQALVVGPCRKCGE 306
           TWLGSHSSCPSCRQ LVVG CRKCGE
Sbjct: 139 TWLGSHSSCPSCRQILVVGRCRKCGE 164


>ref|XP_009604464.1| PREDICTED: RING-H2 finger protein ATL80-like [Nicotiana
           tomentosiformis]
          Length = 184

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -3

Query: 383 TWLGSHSSCPSCRQALVVGPCRKCGE 306
           TWLGSHSSCPSCRQ LVVG CRKCGE
Sbjct: 139 TWLGSHSSCPSCRQILVVGRCRKCGE 164


>gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]
          Length = 170

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -3

Query: 383 TWLGSHSSCPSCRQALVVGPCRKCGEL 303
           TWLGSHSSCPSCRQ LVV  CRKCGEL
Sbjct: 112 TWLGSHSSCPSCRQILVVTRCRKCGEL 138


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