BLASTX nr result
ID: Cinnamomum24_contig00014819
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00014819
(400 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010255451.1| PREDICTED: DNA mismatch repair protein MSH3 ... 103 3e-20
ref|XP_010240638.1| PREDICTED: DNA mismatch repair protein MSH3 ... 95 2e-17
ref|XP_009385995.1| PREDICTED: DNA mismatch repair protein MSH3 ... 95 2e-17
ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 93 6e-17
ref|XP_010934727.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 91 4e-16
ref|XP_006827711.1| PREDICTED: DNA mismatch repair protein MSH3 ... 89 1e-15
ref|XP_002448795.1| hypothetical protein SORBIDRAFT_06g033320 [S... 87 3e-15
ref|XP_008663741.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 86 1e-14
gb|AFW59948.1| hypothetical protein ZEAMMB73_053204 [Zea mays] 86 1e-14
gb|ADT92190.1| DNA mismatch repair protein [Zea mays] 86 1e-14
ref|XP_008806883.1| PREDICTED: DNA mismatch repair protein MSH3 ... 85 2e-14
ref|XP_006653893.1| PREDICTED: DNA mismatch repair protein MSH3-... 85 2e-14
gb|EMT16743.1| DNA mismatch repair protein Msh3 [Aegilops tauschii] 85 2e-14
gb|EEE61928.1| hypothetical protein OsJ_16670 [Oryza sativa Japo... 83 6e-14
gb|EEC78276.1| hypothetical protein OsI_17972 [Oryza sativa Indi... 83 6e-14
gb|EAY96093.1| hypothetical protein OsI_17969 [Oryza sativa Indi... 83 6e-14
emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group] 83 6e-14
emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa Japonica Group] 83 6e-14
ref|XP_010662492.1| PREDICTED: DNA mismatch repair protein MSH3 ... 82 2e-13
ref|XP_010662491.1| PREDICTED: DNA mismatch repair protein MSH3 ... 82 2e-13
>ref|XP_010255451.1| PREDICTED: DNA mismatch repair protein MSH3 [Nelumbo nucifera]
Length = 1119
Score = 103 bits (258), Expect = 3e-20
Identities = 54/116 (46%), Positives = 72/116 (62%)
Frame = +2
Query: 35 SSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDRAAVM 214
+S ++D + + N+DHGDITFLYK++PG+SDKSFGLNVA+LAQLPP+CI RAAVM
Sbjct: 956 ASQKTSVSDFKSDQSVGNVDHGDITFLYKVIPGLSDKSFGLNVAQLAQLPPSCISRAAVM 1015
Query: 215 AAKLETEVSARAGNQLGQRLWGKTDFFEENLSLEKHFDPSEFSPRKELVTLSVDQG 382
AAKLE VS R +L Q+L T E+ P + S + + +G
Sbjct: 1016 AAKLEAVVSVRVETRLAQKLSPGTKSVHAENEAEEMLKPRDGSGFADFSLMDATKG 1071
>ref|XP_010240638.1| PREDICTED: DNA mismatch repair protein MSH3 [Brachypodium distachyon]
Length = 946
Score = 94.7 bits (234), Expect = 2e-17
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +2
Query: 44 LLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDRAAVMAAK 223
LLEITD ++E G E D G+ITFLYK+V G SD+SFGLNVA LAQLP +CI RA+VMAAK
Sbjct: 810 LLEITDEKMEIGTETEDLGEITFLYKLVAGASDRSFGLNVALLAQLPLSCIRRASVMAAK 869
Query: 224 LETEVSARAGNQLGQ 268
L+ E+S R N++G+
Sbjct: 870 LQEELSEREENKVGR 884
>ref|XP_009385995.1| PREDICTED: DNA mismatch repair protein MSH3 [Musa acuminata subsp.
malaccensis]
Length = 1077
Score = 94.7 bits (234), Expect = 2e-17
Identities = 55/111 (49%), Positives = 73/111 (65%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + S LEIT+S S + L H ++TFLYK+V G SDKSFGLNVA+LAQLP +CI R
Sbjct: 910 SYLTSQKPLEITESESISSADKLCHKEVTFLYKLVTGASDKSFGLNVAKLAQLPASCIAR 969
Query: 203 AAVMAAKLETEVSARAGNQLGQRLWGKTDFFEENLSLEKHFDPSEFSPRKE 355
AAVMAAKLE+EVS G++ G+ + +N +L+ + SEF +E
Sbjct: 970 AAVMAAKLESEVSEHLGSKEGRLI----KVSSQNENLDHSSELSEFCKEQE 1016
>ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
[Setaria italica]
Length = 1104
Score = 93.2 bits (230), Expect = 6e-17
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + + L+E+TD LES E+ D G+ITFLYK+V G SD+SFGLNVA LAQLP CI+R
Sbjct: 952 SYLATRKLVEVTDKPLESSPESKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSRCIER 1011
Query: 203 AAVMAAKLETEVSARAGNQL 262
A++MAAKL+ E+S R N+L
Sbjct: 1012 ASIMAAKLQEELSMREENKL 1031
>ref|XP_010934727.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
[Elaeis guineensis]
Length = 1115
Score = 90.5 bits (223), Expect = 4e-16
Identities = 47/78 (60%), Positives = 57/78 (73%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + S +ITDS+ E D G++TFLYK+V G SDKSFGLNVARLAQLP +CI R
Sbjct: 952 SYLTSQKPFKITDSKSEFSVGEPDQGEVTFLYKVVCGASDKSFGLNVARLAQLPSSCIAR 1011
Query: 203 AAVMAAKLETEVSARAGN 256
AA++AAKLE E+S R GN
Sbjct: 1012 AAIVAAKLEAELSERVGN 1029
>ref|XP_006827711.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Amborella
trichopoda] gi|548832331|gb|ERM95127.1| hypothetical
protein AMTR_s00009p00259730 [Amborella trichopoda]
Length = 1092
Score = 88.6 bits (218), Expect = 1e-15
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = +2
Query: 53 ITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDRAAVMAAKLET 232
+T E+G EN HG++TFLYK+VPG +DKSFGLNVA LAQLP +CI RAAVMAAKLE+
Sbjct: 959 LTTKTTENG-ENTGHGNVTFLYKVVPGGTDKSFGLNVAGLAQLPASCIARAAVMAAKLES 1017
Query: 233 EVSARAGNQL 262
+V +R N+L
Sbjct: 1018 DVCSRLKNRL 1027
>ref|XP_002448795.1| hypothetical protein SORBIDRAFT_06g033320 [Sorghum bicolor]
gi|241939978|gb|EES13123.1| hypothetical protein
SORBIDRAFT_06g033320 [Sorghum bicolor]
Length = 280
Score = 87.4 bits (215), Expect = 3e-15
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + + LLE+TD +E+ E + G+I FLYK+V G SD+SFGLNVA LAQLP CI R
Sbjct: 133 SYLATMKLLEVTDKPVETSPEANNLGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKR 192
Query: 203 AAVMAAKLETEVSARAGNQL 262
A+VMAAKL+ E+SAR N+L
Sbjct: 193 ASVMAAKLQEELSAREENKL 212
>ref|XP_008663741.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3 [Zea
mays]
Length = 1097
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + + LLE+TD ++E+ E D G+I FLYK+V G SD+SFGLNVA LAQLP CI R
Sbjct: 950 SYLATRKLLEVTDKQVETSPEANDLGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKR 1009
Query: 203 AAVMAAKLETEVSAR 247
A+VMAAKL+ E+S R
Sbjct: 1010 ASVMAAKLQEELSPR 1024
>gb|AFW59948.1| hypothetical protein ZEAMMB73_053204 [Zea mays]
Length = 223
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + + LLE+TD ++E+ E D G+I FLYK+V G SD+SFGLNVA LAQLP CI R
Sbjct: 76 SYLATRKLLEVTDKQVETSPEANDLGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKR 135
Query: 203 AAVMAAKLETEVSAR 247
A+VMAAKL+ E+S R
Sbjct: 136 ASVMAAKLQEELSPR 150
>gb|ADT92190.1| DNA mismatch repair protein [Zea mays]
Length = 981
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + + LLE+TD ++E+ E D G+I FLYK+V G SD+SFGLNVA LAQLP CI R
Sbjct: 834 SYLATRKLLEVTDKQVETSPEANDLGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKR 893
Query: 203 AAVMAAKLETEVSAR 247
A+VMAAKL+ E+S R
Sbjct: 894 ASVMAAKLQEELSPR 908
>ref|XP_008806883.1| PREDICTED: DNA mismatch repair protein MSH3 [Phoenix dactylifera]
Length = 1033
Score = 85.1 bits (209), Expect = 2e-14
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDR 202
S + S ++TDS+ + D ++TFLYK+V G SDKSFGLNVARLAQLP +CI R
Sbjct: 881 SYLTSQKPFKLTDSKSKFSVGESDQREVTFLYKVVLGASDKSFGLNVARLAQLPSSCIAR 940
Query: 203 AAVMAAKLETEVSARAGN 256
AA+MAAKLE EVS GN
Sbjct: 941 AAIMAAKLEAEVSEWVGN 958
>ref|XP_006653893.1| PREDICTED: DNA mismatch repair protein MSH3-like, partial [Oryza
brachyantha]
Length = 894
Score = 85.1 bits (209), Expect = 2e-14
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLESGDENLDH-GDITFLYKIVPGMSDKSFGLNVARLAQLPPACID 199
S + + LLE+ D ++ + + H G+ITFLYK+V G SD+SFGLNVA LAQLP CI+
Sbjct: 748 SYLATRKLLELADRQVVINNTGMKHLGEITFLYKLVAGASDRSFGLNVALLAQLPSRCIE 807
Query: 200 RAAVMAAKLETEVSARAGNQLGQ 268
RA+VMAAKL+ E+S R N+ G+
Sbjct: 808 RASVMAAKLQEELSVREKNKFGR 830
>gb|EMT16743.1| DNA mismatch repair protein Msh3 [Aegilops tauschii]
Length = 858
Score = 84.7 bits (208), Expect = 2e-14
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +2
Query: 44 LLEITDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDRAAVMAAK 223
LL+I+D ++ E D G+ITFLYK+V G SD+SFGLNVA LAQLP CI RA+VMAAK
Sbjct: 716 LLQISDEKMGISTETEDLGEITFLYKLVAGASDRSFGLNVALLAQLPLRCIKRASVMAAK 775
Query: 224 LETEVSARAGNQL 262
L+ E+S R N+L
Sbjct: 776 LQEEMSKRDENKL 788
>gb|EEE61928.1| hypothetical protein OsJ_16670 [Oryza sativa Japonica Group]
Length = 2115
Score = 83.2 bits (204), Expect = 6e-14
Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLE-SGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACID 199
S + + LLE+ D ++ + E D G+ITFLYK+V G SD+SFGLNVA LAQLP +CI+
Sbjct: 793 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 852
Query: 200 RAAVMAAKLETEVSARAGNQ 259
RA+VMAAKL+ E+S R N+
Sbjct: 853 RASVMAAKLQQELSEREKNK 872
>gb|EEC78276.1| hypothetical protein OsI_17972 [Oryza sativa Indica Group]
Length = 2246
Score = 83.2 bits (204), Expect = 6e-14
Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLE-SGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACID 199
S + + LLE+ D ++ + E D G+ITFLYK+V G SD+SFGLNVA LAQLP +CI+
Sbjct: 944 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 1003
Query: 200 RAAVMAAKLETEVSARAGNQ 259
RA+VMAAKL+ E+S R N+
Sbjct: 1004 RASVMAAKLQQELSEREKNK 1023
>gb|EAY96093.1| hypothetical protein OsI_17969 [Oryza sativa Indica Group]
Length = 237
Score = 83.2 bits (204), Expect = 6e-14
Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLE-SGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACID 199
S + + LLE+ D ++ + E D G+ITFLYK+V G SD+SFGLNVA LAQLP +CI+
Sbjct: 93 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 152
Query: 200 RAAVMAAKLETEVSARAGNQ 259
RA+VMAAKL+ E+S R N+
Sbjct: 153 RASVMAAKLQQELSEREKNK 172
>emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 83.2 bits (204), Expect = 6e-14
Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLE-SGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACID 199
S + + LLE+ D ++ + E D G+ITFLYK+V G SD+SFGLNVA LAQLP +CI+
Sbjct: 1178 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 1237
Query: 200 RAAVMAAKLETEVSARAGNQ 259
RA+VMAAKL+ E+S R N+
Sbjct: 1238 RASVMAAKLQQELSEREKNK 1257
>emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa Japonica Group]
Length = 1085
Score = 83.2 bits (204), Expect = 6e-14
Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 23 SDVCSSDLLEITDSRLE-SGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACID 199
S + + LLE+ D ++ + E D G+ITFLYK+V G SD+SFGLNVA LAQLP +CI+
Sbjct: 941 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 1000
Query: 200 RAAVMAAKLETEVSARAGNQ 259
RA+VMAAKL+ E+S R N+
Sbjct: 1001 RASVMAAKLQQELSEREKNK 1020
>ref|XP_010662492.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X2 [Vitis
vinifera]
Length = 1078
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +2
Query: 56 TDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDRAAVMAAKLETE 235
TDS+ + + +DH D+T+LYK+VPG+S++SFG VA+LAQLP +CI RA VMAA+LE
Sbjct: 943 TDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAELEAM 1002
Query: 236 VSARAGNQLGQR 271
+ +R N Q+
Sbjct: 1003 IVSRVKNSSAQK 1014
>ref|XP_010662491.1| PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Vitis
vinifera]
Length = 1111
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +2
Query: 56 TDSRLESGDENLDHGDITFLYKIVPGMSDKSFGLNVARLAQLPPACIDRAAVMAAKLETE 235
TDS+ + + +DH D+T+LYK+VPG+S++SFG VA+LAQLP +CI RA VMAA+LE
Sbjct: 976 TDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAELEAM 1035
Query: 236 VSARAGNQLGQR 271
+ +R N Q+
Sbjct: 1036 IVSRVKNSSAQK 1047