BLASTX nr result

ID: Cinnamomum24_contig00014405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00014405
         (664 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN16302.1| hypothetical protein AMTR_s00063p00208440 [Ambore...    99   8e-35
gb|KJB09741.1| hypothetical protein B456_001G161700 [Gossypium r...   122   1e-25
gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) ...    92   2e-20
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...   105   2e-20
ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    79   2e-20
gb|ERN04090.1| hypothetical protein AMTR_s05659p00002430 [Ambore...    74   3e-15
gb|ERN04089.1| hypothetical protein AMTR_s05659p00000220 [Ambore...    86   2e-14
emb|CDY45519.1| BnaCnng12780D [Brassica napus]                         84   9e-14
gb|AHY20296.1| cytochrome c oxidase subunit 2-1 (mitochondrion) ...    84   9e-14
gb|ERN16299.1| hypothetical protein AMTR_s00063p00206020 [Ambore...    73   3e-13
gb|KFK42008.1| hypothetical protein AALP_AA2G200300 [Arabis alpina]    73   1e-10
ref|YP_004927630.1| hypothetical protein AnruMp28 (mitochondrion...    44   6e-07

>gb|ERN16302.1| hypothetical protein AMTR_s00063p00208440 [Amborella trichopoda]
          Length = 107

 Score = 99.0 bits (245), Expect(2) = 8e-35
 Identities = 47/54 (87%), Positives = 48/54 (88%)
 Frame = +3

Query: 357 LALYGVPRGSSSASRREECHQLGRYWPLTTRSPAARAPRFKFVILTVSSAPPGA 518
           LALYGVP G SSAS R ECHQLGRYWPLTTRSPAARAPRF FV+L VSSAPPGA
Sbjct: 54  LALYGVPHGFSSASHRGECHQLGRYWPLTTRSPAARAPRFNFVMLIVSSAPPGA 107



 Score = 75.9 bits (185), Expect(2) = 8e-35
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = +2

Query: 245 DTVALPWGRGSPDFHRSLVRPPNEN*GPCAGVSSLRLA 358
           DT+ALPWGRGSPDFHRSLVRPPNEN GPC G+ SLRLA
Sbjct: 18  DTIALPWGRGSPDFHRSLVRPPNENLGPCTGLLSLRLA 55


>gb|KJB09741.1| hypothetical protein B456_001G161700 [Gossypium raimondii]
          Length = 407

 Score =  122 bits (307), Expect = 1e-25
 Identities = 65/103 (63%), Positives = 70/103 (67%)
 Frame = -2

Query: 378 GALHTEQASLRDETPAQGPQFSLGGRTKDLWKSGLPRPHGNATVS*GRSLEAL**HGPLF 199
           G+  ++Q    DETPAQGPQFSLGGRTKDLWKSGLP PHG                    
Sbjct: 271 GSQGSKQVLGMDETPAQGPQFSLGGRTKDLWKSGLPCPHGQRNS---------------V 315

Query: 198 LSRSCEGGQSKIVLFLYKDNRRSQRLGATLFLSYSSFFMISCR 70
           L     GGQSKIVLFLYKDNRRSQRLG TLFLSYSSFF++SCR
Sbjct: 316 LREEFRGGQSKIVLFLYKDNRRSQRLGVTLFLSYSSFFILSCR 358


>gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) [Raphanus sativus]
           gi|662020252|gb|AIE42541.1| hypothetical protein
           RadishMT_p010 (mitochondrion) [Raphanus sativus]
          Length = 92

 Score = 92.4 bits (228), Expect(2) = 2e-20
 Identities = 48/69 (69%), Positives = 48/69 (69%)
 Frame = +2

Query: 410 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPXXXXXXXXXXXXXXXXXXAVI 589
           MPSTRALLATNHSLA RSGSAFQVRYPNR LCSTG LAP                  AVI
Sbjct: 1   MPSTRALLATNHSLASRSGSAFQVRYPNRPLCSTGCLAPSSILSTALLLGSLQLQPLAVI 60

Query: 590 ACFSGGSHP 616
           ACFSGGSHP
Sbjct: 61  ACFSGGSHP 69



 Score = 34.3 bits (77), Expect(2) = 2e-20
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 613 PRVVRLSQSGLSSRPMY 663
           PRVVRLSQSGL+SRPM+
Sbjct: 69  PRVVRLSQSGLNSRPMF 85


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score =  105 bits (262), Expect = 2e-20
 Identities = 49/58 (84%), Positives = 53/58 (91%)
 Frame = -2

Query: 660 HRPTAEPTLAQPHHPGCEPPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 487
           HRPTAE TLAQPHHPGC+PP+KQ ITAS WS REPRSKAVDKI+EGARL VEQRR+LG
Sbjct: 82  HRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139


>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 78.6 bits (192), Expect(2) = 2e-20
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +2

Query: 410 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAP 526
           MPSTRALLATNHSLAGR GSAFQVRYPNRLLCSTGSLAP
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAP 39



 Score = 47.8 bits (112), Expect(2) = 2e-20
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +1

Query: 592 LLLGWLAPRVVRLSQSGLSSRPMY 663
           LLLGWLAP VVRLSQSGLSSRPM+
Sbjct: 60  LLLGWLAPEVVRLSQSGLSSRPMF 83


>gb|ERN04090.1| hypothetical protein AMTR_s05659p00002430 [Amborella trichopoda]
          Length = 115

 Score = 73.9 bits (180), Expect(2) = 3e-15
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -2

Query: 606 PPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 487
           P +++AITASGWSSREPRS+AVDKIEEGARLPVEQRRRLG
Sbjct: 76  PKKERAITASGWSSREPRSEAVDKIEEGARLPVEQRRRLG 115



 Score = 35.0 bits (79), Expect(2) = 3e-15
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 662 YIGRLLSPLWLSRTT 618
           YIGRLLSPLWLSRTT
Sbjct: 61  YIGRLLSPLWLSRTT 75


>gb|ERN04089.1| hypothetical protein AMTR_s05659p00000220 [Amborella trichopoda]
          Length = 102

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 47/74 (63%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = -1

Query: 289 MEVGATPSPWQRNSVLREEFRGLIVARTSFSF*VMRRGPVQDRTVPLQRQQTLS-TARRH 113
           MEVGATPSPWQRNSVLREEFRGLIVARTSF     +    +      ++    S   RRH
Sbjct: 1   MEVGATPSPWQRNSVLREEFRGLIVARTSFFLGHAKGASPRSYCSSTKKDNRRSQRRRRH 60

Query: 112 SLSELFQLLHDFVP 71
           SLSE FQLLHDFVP
Sbjct: 61  SLSEFFQLLHDFVP 74


>emb|CDY45519.1| BnaCnng12780D [Brassica napus]
          Length = 296

 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -2

Query: 615 GCEPPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 487
           GCEPPEKQAITASGWS REPRSKAVDKIEEGAR PVEQR RLG
Sbjct: 254 GCEPPEKQAITASGWSCREPRSKAVDKIEEGARHPVEQRGRLG 296


>gb|AHY20296.1| cytochrome c oxidase subunit 2-1 (mitochondrion) (mitochondrion)
           [Brassica juncea var. tumida]
          Length = 372

 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -2

Query: 615 GCEPPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 487
           GCEPPEKQAITASGWS REPRSKAVDKIEEGAR PVEQR RLG
Sbjct: 330 GCEPPEKQAITASGWSCREPRSKAVDKIEEGARHPVEQRGRLG 372


>gb|ERN16299.1| hypothetical protein AMTR_s00063p00206020 [Amborella trichopoda]
          Length = 113

 Score = 73.2 bits (178), Expect(2) = 3e-13
 Identities = 42/74 (56%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = +2

Query: 410 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPXXXXXXXXXXXXXXXXXXAVI 589
           MPSTRALLATNHSL GRS S FQ+RYPNRLLCSTGSL P                  A+I
Sbjct: 1   MPSTRALLATNHSLTGRSSSTFQLRYPNRLLCSTGSLTPSSTLSTTSLLSSLLLQLPALI 60

Query: 590 A-CFSGGS--HPGW 622
           A  F GG    P W
Sbjct: 61  ARSFLGGGAIEPQW 74



 Score = 29.3 bits (64), Expect(2) = 3e-13
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +3

Query: 618 GGAAEPEWAQQSAYV 662
           GGA EP+WAQ SA+V
Sbjct: 67  GGAIEPQWAQHSAFV 81


>gb|KFK42008.1| hypothetical protein AALP_AA2G200300 [Arabis alpina]
          Length = 35

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -3

Query: 416 MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH 312
           MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH
Sbjct: 1   MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH 35


>ref|YP_004927630.1| hypothetical protein AnruMp28 (mitochondrion) [Anomodon rugelii]
           gi|336089487|gb|AEH99677.1| hypothetical protein
           AnruMp28 [Anomodon rugelii]
          Length = 101

 Score = 44.3 bits (103), Expect(2) = 6e-07
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
 Frame = -1

Query: 514 PGGAEETVRITNLKRGARA----------AGERVVSGQ*RPS*WHSSL----RLALEEPR 377
           PG AE+ VRIT+LKRGAR           +GERVV+   +P   +  L      ALE+P+
Sbjct: 20  PGEAEDMVRITSLKRGARPKLDRPSQAGYSGERVVN---KPIVLNPQLMALASAALEKPQ 76

Query: 376 GTPYRAS 356
           GTPYR S
Sbjct: 77  GTPYRVS 83



 Score = 36.6 bits (83), Expect(2) = 6e-07
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 360 QASLRDETPAQGPQFSLGGRT 298
           + S RD+TPAQGP+FSLGG+T
Sbjct: 81  RVSPRDQTPAQGPKFSLGGKT 101


Top