BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00014038
         (2964 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub...  1134   0.0  
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ...  1127   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...  1066   0.0  
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub...  1065   0.0  
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...  1062   0.0  
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub...  1061   0.0  
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...  1050   0.0  
ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub...  1040   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...  1038   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...  1038   0.0  
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub...  1035   0.0  
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r...  1035   0.0  
gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium r...  1035   0.0  
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub...  1035   0.0  
gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like pro...  1031   0.0  
ref|XP_010032299.1| PREDICTED: DNA-directed RNA polymerase V sub...  1025   0.0  
ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V sub...  1024   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...  1020   0.0  
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub...  1019   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...  1018   0.0  

>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] gi|743822629|ref|XP_010932323.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis] gi|743822631|ref|XP_010932324.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 559/821 (68%), Positives = 669/821 (81%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEE  PSPLI DG V  I FS AT+EEIR         SHPSQL NPFLGLP+E GKCES
Sbjct: 1    MEEHVPSPLISDGSVRGISFSAATIEEIRTCSINDCPVSHPSQLTNPFLGLPLEFGKCES 60

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGT+E GKCEGHFGYI LP+P+YHPSHV+EL++ILSLVCLKC+R+K GK+    G +   
Sbjct: 61   CGTAEPGKCEGHFGYIELPVPVYHPSHVSELRQILSLVCLKCMRMK-GKVKHGNGKEKVT 119

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
            +  CL C+D+P +S+ E +TTD A  LEL++ SR+RLRDGFW FL+R+GF YG D+ CR 
Sbjct: 120  TTSCLYCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYG-DTYCRP 178

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP EAL IL  IP+ETK++L+ KGYFPQ GFIL+ LPVPPNCL VP++SDG +IMSSDI
Sbjct: 179  LLPYEALNILKEIPQETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDI 238

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            S+S+L++VLNK+E+IKRSRSG PNF+SHE+E+NDLQS++SQYMHLRGTPKVPQD+T+KF 
Sbjct: 239  SISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFA 298

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
            +  E +  STK WLEKMRTLFIRKGSGFSSRSVITGDAY GVN IG+P EIA++ITFEE+
Sbjct: 299  IGTEANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEER 358

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            VT  N+  LQE+VD  LCVTY+DG +TYAI  GSKGHTYLKVGQVINRRIMDGDIVFINR
Sbjct: 359  VTVHNMKQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINR 418

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PPSTHKHSLQAF VYVHDDHTVKINPLIC PLGADFDGDCVHIFYPQSLAAKAEV+ELFS
Sbjct: 419  PPSTHKHSLQAFYVYVHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLAAKAEVLELFS 478

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            VEKQ++SSH+G+LNLQLVHD              +K TA+QL+M  SP++  PA+ KA+ 
Sbjct: 479  VEKQLLSSHTGNLNLQLVHDTLLALKLMSNAAFLRKTTAEQLAMFVSPILPPPAIFKAHK 538

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
            SGP WT  Q+L+  LP+ LD  GERHLIS  EI+K+D  RD VQS+FTE+IT IF +KGP
Sbjct: 539  SGPFWTVHQILQNALPTFLDCFGERHLISNGEIIKLDLRRDAVQSLFTEIITSIFIMKGP 598

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
            KEAL  FN+LQPLLMEVL  EG+SI L DF +P +VI + +Q+VQ+ S +L +LR  Y+E
Sbjct: 599  KEALNFFNMLQPLLMEVLVMEGFSISLQDFYVPSAVIEKAQQSVQENSFILDQLRSKYNE 658

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
            +VEL++ENHLKS+KLP+V +IL  +SLGNLIDSKSDS+I KVVQQ+GFLGLQLFD GK Y
Sbjct: 659  LVELQVENHLKSIKLPIVNFILNLTSLGNLIDSKSDSSIIKVVQQLGFLGLQLFDRGKLY 718

Query: 700  SKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSR 521
            S+ LVED   +F +K  T GAD   EA+GL+++ F  GLNPYE  VH+ISSREV++RSSR
Sbjct: 719  SRALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSR 778

Query: 520  GLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYG 398
            GLTEPG LFKNLMAILRDV+ICYDG++R+ C +SIIQFEYG
Sbjct: 779  GLTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSIIQFEYG 819



 Score =  167 bits (422), Expect = 6e-38
 Identities = 83/123 (67%), Positives = 98/123 (79%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVL+SSQSNNSSWELMKEILLCKV FKN V DR+VILYLNDC CGKK+CKENAA  VQ+
Sbjct: 850  KAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCLCGKKFCKENAAIAVQN 909

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
             L++  LKD A D +IEYQK+ +  + SE  +GLVGHIH+DK RLK  + +  EIL+ CQ
Sbjct: 910  CLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEILRKCQ 969

Query: 11   DVI 3
            DVI
Sbjct: 970  DVI 972


>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
          Length = 1673

 Score = 1127 bits (2916), Expect = 0.0
 Identities = 558/821 (67%), Positives = 666/821 (81%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEE+ PSPLI DG V  I FS AT EEIRK        SHPSQL NPFLGLP+E GKCES
Sbjct: 1    MEENIPSPLISDGSVRGISFSAATFEEIRKYAINDCPVSHPSQLTNPFLGLPLEFGKCES 60

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGT+E GKCEGHFGYI LP+P+YHPSHV+EL++ILSLVCLKC+R+K GK+    G +   
Sbjct: 61   CGTAEPGKCEGHFGYIELPVPVYHPSHVSELRQILSLVCLKCMRMK-GKVKHGSGKEKVS 119

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
            +  CL C+D+P +S+ E +TTD A  LEL++ SR+RLRDGFW FL+R+GF YG D+ CR 
Sbjct: 120  TTSCLYCRDLPPISVKEVKTTDNALCLELRVSSRTRLRDGFWKFLDRFGFCYG-DTYCRP 178

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP EAL IL  IPEETK++L+ KGYFPQ GFIL+ LPVPPNCL VP++SDG +IMSSDI
Sbjct: 179  LLPYEALNILKEIPEETKKRLAAKGYFPQIGFILQYLPVPPNCLCVPEVSDGKSIMSSDI 238

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            S+S+L++VLNK+E+IKRSRSG PNF+SHE+E+NDLQS++SQYMHLRGTPKVPQD+T+KF 
Sbjct: 239  SISLLKRVLNKIELIKRSRSGFPNFKSHEVESNDLQSSISQYMHLRGTPKVPQDITKKFA 298

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
            +  E +  STK WLEKMRTLFIRKGSGFSSRSVITGDAY GVN IG+P EIA++ITFEE+
Sbjct: 299  IGTEANECSTKLWLEKMRTLFIRKGSGFSSRSVITGDAYIGVNVIGLPSEIAKRITFEER 358

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            VT  N+  LQE+VD  LCVTY+DG +TYAI  GSKGHTYLKVGQVINRRIMDGDIVFINR
Sbjct: 359  VTVHNMKQLQEVVDKGLCVTYKDGFSTYAIAVGSKGHTYLKVGQVINRRIMDGDIVFINR 418

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PPSTHKHSLQAF VYVHDDHTVKINPLIC PLGADFDGDCVHIFYPQS AAKAEV+ELFS
Sbjct: 419  PPSTHKHSLQAFYVYVHDDHTVKINPLICAPLGADFDGDCVHIFYPQSFAAKAEVLELFS 478

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            VEKQ++SSH+G+LNLQLVHD              +K  A+QL+M  SP++  PA+ KA+ 
Sbjct: 479  VEKQLLSSHTGNLNLQLVHDTLLALKLMSNTAFLRKTMAEQLAMFVSPILPPPAIFKAHK 538

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
            SGP WT  Q+L+  LP++LD  GERHLIS SEI+K+D  RD VQ +FTE+IT IF  KGP
Sbjct: 539  SGPFWTVHQILQNALPALLDCFGERHLISDSEIIKLDLRRDAVQPLFTEIITSIFIKKGP 598

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
            KEAL  FN+LQPLLMEVL  EG+SI L DF +P +VI + ++NVQ+ S +L +LR  Y+E
Sbjct: 599  KEALNFFNMLQPLLMEVLVMEGFSISLKDFYVPSAVIKKAQRNVQENSFILDQLRSKYNE 658

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
            +VEL++ENHLKS+KLP+V +IL  +SLG LIDSKSDS+I KVVQQ+GFLGLQLFD GK Y
Sbjct: 659  LVELQVENHLKSIKLPIVNFILNLTSLGYLIDSKSDSSIIKVVQQLGFLGLQLFDRGKLY 718

Query: 700  SKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSR 521
            S  LVED   +F +K  T GAD   EA+GL+++ F  GLNPYE  VH+ISSREV++RSSR
Sbjct: 719  SGALVEDCFTNFVNKYSTSGADHSCEAYGLVKNCFFHGLNPYEELVHAISSREVIVRSSR 778

Query: 520  GLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYG 398
            GLTEPG LFKNLMAILRDV+ICYDG++R+ C +SIIQFEYG
Sbjct: 779  GLTEPGTLFKNLMAILRDVIICYDGSVRNVCSNSIIQFEYG 819



 Score =  163 bits (412), Expect = 9e-37
 Identities = 82/123 (66%), Positives = 97/123 (78%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVL+SSQSNNSSWELMKEILLCKV FKN V DR+VILYLNDC CGKK+CKENAA  VQ+
Sbjct: 850  KAVLESSQSNNSSWELMKEILLCKVMFKNVVTDRRVILYLNDCFCGKKFCKENAAIAVQN 909

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
             L++  LKD A D +IEYQK+ +  + SE  +GLVGHIH+DK  LK  + +  EIL+ CQ
Sbjct: 910  CLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMGLKLLNRSPDEILRKCQ 969

Query: 11   DVI 3
            DVI
Sbjct: 970  DVI 972


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1066 bits (2758), Expect(2) = 0.0
 Identities = 535/824 (64%), Positives = 648/824 (78%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEED  S  I+DG +  I+F +AT +EI          SH SQL NPFLGLP+E GKCES
Sbjct: 1    MEED--SSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCES 58

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGT+E G+CEGHFGYI LPIPIYHP HV+ELKR+LSL+CLKCL+I+K K+     N  + 
Sbjct: 59   CGTAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTN---NGITE 115

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
             +    CQD P +S+ E R T+GA FLELK+PSRSR +DGFW+FL RYG+ YG + S R 
Sbjct: 116  QLLAPCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLS-RI 174

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP+E ++IL  IPE+T++KL  KGYFPQ+G+IL+ LPVPPNCLSVPDISDG +IMSSD+
Sbjct: 175  LLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDL 234

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            SVSML+KVL ++E+IK SRSG PNFESH+IEAN+LQS++ QY+ +RGT K  + +  +FG
Sbjct: 235  SVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFG 294

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
              KE + SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAY+ VNEIG+P EIAQ+ITFEE+
Sbjct: 295  SSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEER 354

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            V   N+ HLQ LVD KLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINR
Sbjct: 355  VNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 414

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PP+THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDCVH+FYPQSL AKAEV+ELFS
Sbjct: 415  PPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFS 474

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            VEKQ++SSHSG+LNLQL  D               KA AQQL M  S  +  PAL+K+  
Sbjct: 475  VEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPC 534

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
            SGP WT LQ+L+T LPS  D  GERH IS+S I+K+D+NRD++QS+  E++T IF  KGP
Sbjct: 535  SGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGP 594

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
             E LK F+ LQPLLME LF EG+S+ L DF IP  V   +++NV+D+S LLY LR  Y+E
Sbjct: 595  NEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNE 654

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
            +++L+ ENHL+  K+P+  +IL SS+LGNLIDSKSDSAI KVVQQIGFLG QL + GKFY
Sbjct: 655  LLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFY 714

Query: 700  SKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSR 521
            S+ LVE M   F+SK    GAD PS  FGLIRS F  GL+PYE  VHSIS+RE+++RSSR
Sbjct: 715  SRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSR 774

Query: 520  GLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            GL+EPG LFKNLMAILRDVVICYDGT+R+ C +SIIQFEYG+KA
Sbjct: 775  GLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKA 818



 Score =  157 bits (398), Expect(2) = 0.0
 Identities = 76/123 (61%), Positives = 97/123 (78%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEILLC+VNFKND+ DR+VILYLNDC CG+KYC+ENAA LV++
Sbjct: 846  KAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENAAYLVKN 905

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
             L+KA LKD A +  IEY KQ      SE   GLVGHIH++K  L++ ++++QE+ Q C+
Sbjct: 906  QLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQEVCQKCE 965

Query: 11   DVI 3
            + I
Sbjct: 966  ETI 968


>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
            gi|720093477|ref|XP_010246064.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Nelumbo nucifera]
            gi|720093480|ref|XP_010246066.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Nelumbo nucifera]
          Length = 1908

 Score = 1065 bits (2755), Expect(2) = 0.0
 Identities = 531/822 (64%), Positives = 647/822 (78%), Gaps = 1/822 (0%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEED  S + +DG +  I+F++AT +EI          SHPSQL NPFLGLP+E G CES
Sbjct: 1    MEEDHLSTITLDGEITGIRFNLATSQEICTSSVNDCPISHPSQLTNPFLGLPLEYGNCES 60

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGTSE GKCEGHFGYI LP+PIYHP HV+ELK IL L+CLKCLR+K  K+  T G + S 
Sbjct: 61   CGTSEPGKCEGHFGYIQLPVPIYHPCHVSELKHILDLICLKCLRMKMRKVKETSGTERSS 120

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
            S  C  C D+P LSI E +TTDGA +LELK+ SRSR +DGFWNFL RYGF YG D S R+
Sbjct: 121  SAPCSYCPDLPQLSIKEVKTTDGACYLELKISSRSRSQDGFWNFLERYGFRYG-DGSQRT 179

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP+E+L+IL  IPEET+RKL GKG+FPQ G+IL+ LPVPPNCLSVPDISDG +IMSSD+
Sbjct: 180  LLPSESLEILKRIPEETRRKLIGKGHFPQYGYILQYLPVPPNCLSVPDISDGISIMSSDL 239

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            S++MLRKVL ++EII+ SRSG PNFES EIEAN+LQS V+ Y+H+RGT K  +D+  +F 
Sbjct: 240  SITMLRKVLKQIEIIRSSRSGAPNFESQEIEANELQSTVANYLHVRGTAKASRDVDTRFS 299

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
            V K  +++ TKAWLEKMRTLFI KGSGFSSRSVITGDAY+G+NEIG+P E+AQ+ITFEEK
Sbjct: 300  VSKGVNDTCTKAWLEKMRTLFISKGSGFSSRSVITGDAYKGINEIGLPSEVAQRITFEEK 359

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            V+  N++HLQ+LVDNKLC+TY DG +TY++R+GSKG+T L+VGQV+ RRIMDGDIVFINR
Sbjct: 360  VSIHNMDHLQKLVDNKLCLTYTDGLSTYSLRDGSKGYTSLRVGQVVRRRIMDGDIVFINR 419

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PPSTHKHSLQAFSVYVHDDHTVK+NPLICGPLGADFDGDCVH+FYPQSL AK+EV+ELF+
Sbjct: 420  PPSTHKHSLQAFSVYVHDDHTVKVNPLICGPLGADFDGDCVHLFYPQSLEAKSEVLELFA 479

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            V+ Q++SSHSG+LNLQL +D               KA++QQL M     +  PAL+KA+ 
Sbjct: 480  VQHQLLSSHSGNLNLQLANDSLLSLNILFKRFFFDKASSQQLGMFVPMGLPQPALLKAHH 539

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
              P WT LQ+L+T LPS  D S  R+LISQSEI+K DFN+D +Q+ F E+I  +   KG 
Sbjct: 540  DDPVWTALQILQTALPSCFDSSERRYLISQSEILKFDFNKDALQTSFNEIINSVLFQKGS 599

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
            KEAL V N LQPLLME +F  G+S+ L DF IP++V  +L + V+ + PLL+ LR  Y+E
Sbjct: 600  KEALNVVNSLQPLLMEHIFSVGFSVSLKDFSIPRAVTEELHKMVEVILPLLHHLRSEYNE 659

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
            +VEL++ENHL+ +K+P+V +ILKSS LGNLIDSKSDS+I KVVQQ+GFLGLQ  D GK Y
Sbjct: 660  MVELQVENHLRIVKVPVVKFILKSSILGNLIDSKSDSSINKVVQQVGFLGLQFSDRGKLY 719

Query: 700  SKGLVEDMNLHFQSK-CHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSS 524
            S+ LVE +   F+SK C     + P E+FGLI S F  GLNPYE  VHSISSREVL+RSS
Sbjct: 720  SRTLVEALTSFFRSKYCVNRDGESP-ESFGLISSCFFNGLNPYEELVHSISSREVLVRSS 778

Query: 523  RGLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYG 398
            RGLTEPG LFKNLMAILRDVVICYDGT+R+ C +S+IQFEYG
Sbjct: 779  RGLTEPGTLFKNLMAILRDVVICYDGTVRNVCNNSLIQFEYG 820



 Score =  157 bits (398), Expect(2) = 0.0
 Identities = 76/123 (61%), Positives = 95/123 (77%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS SNNSSWELMKEILLC+ +FKND+ DR+VILYLNDC CG  YCKE AA +VQ+
Sbjct: 851  KAVLDSSPSNNSSWELMKEILLCRASFKNDLIDRRVILYLNDCGCGGYYCKEKAAYIVQN 910

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL++  L D A D +I+YQKQ  FP  S  +AGLVGHIH+DK  LK  + ++ +IL+ CQ
Sbjct: 911  HLKRVSLMDIAVDFSIKYQKQCIFPGNSVTNAGLVGHIHLDKMSLKALNRSMADILKDCQ 970

Query: 11   DVI 3
            + +
Sbjct: 971  ETL 973


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score = 1062 bits (2747), Expect(2) = 0.0
 Identities = 523/815 (64%), Positives = 645/815 (79%)
 Frame = -3

Query: 2833 IVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCGTSEHGKC 2654
            I+DG V  I+F +AT +EI          +H SQL NP+LGLP+E GKC+SCGTSE GKC
Sbjct: 17   ILDGEVVGIRFGLATPKEISTASVSGCSINHSSQLTNPYLGLPLEFGKCQSCGTSEAGKC 76

Query: 2653 EGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSIQCLSCQD 2474
            EGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K  K          R   C  C++
Sbjct: 77   EGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKTNKFQAKSNGVAERLFSC--CEE 134

Query: 2473 VPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLLPAEALKI 2294
               +S+ E +TTDGA FL+LKLPSR RL DGFW+FL+RYGF YGGD + RSLLP E +++
Sbjct: 135  ASQISVKEIKTTDGALFLQLKLPSRMRLNDGFWSFLDRYGFHYGGDDTIRSLLPCEVMEM 194

Query: 2293 LSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISVSMLRKVL 2114
            L  IP++T++KL+ KGYFPQ G+I+  LPVPPNCLSVPDISDG +IMSSD+S+SML+KVL
Sbjct: 195  LKRIPQDTRKKLARKGYFPQEGYIMRYLPVPPNCLSVPDISDGVSIMSSDLSISMLKKVL 254

Query: 2113 NKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVVKEGDNSS 1934
             +VEIIK SRSG PNFESHE+EA DLQSAV QY+ +RGT K  +D+  +FG+ KE ++SS
Sbjct: 255  KQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDVESRFGIHKESNDSS 314

Query: 1933 TKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVTPLNLNHL 1754
            TKAWLEKMRTLFIRKGSGFSSRSVITGDAY+ VNEIGIP EIAQ+ITFEE+V+  N+ +L
Sbjct: 315  TKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEERVSVHNVKYL 374

Query: 1753 QELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHKHSL 1574
            QELVDNKLC+TYRDGS+TY++R+GSKGHT+L+ GQV++RRIMDGD VFINRPP+THKHSL
Sbjct: 375  QELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDTVFINRPPTTHKHSL 434

Query: 1573 QAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVEKQMISSH 1394
            QA SVYVHDDHTVKINPLICGPL ADFDGDCVH+FYPQSLAAKAEV+ELFSVEKQ++SSH
Sbjct: 435  QALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSVEKQLLSSH 494

Query: 1393 SGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSGPSWTYLQ 1214
            SG+LNLQL  D               +A AQQL+M  S  +  P L K   S P WT LQ
Sbjct: 495  SGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPYSDPIWTVLQ 554

Query: 1213 LLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKEALKVFNL 1034
            +L+T LPS  D +GER+ IS+ +I+KIDF+RD+VQS+  E++  IF  KGP    K FN 
Sbjct: 555  ILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIFFEKGPDAVFKFFNS 614

Query: 1033 LQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVVELEIENH 854
            LQPLLME LF EG+S+ L D  I ++VI  + ++ + +SPLL +LR TY+E+VEL++ENH
Sbjct: 615  LQPLLMENLFSEGFSVCLEDLYISRAVIESIHKDFKVISPLLSQLRSTYNELVELQLENH 674

Query: 853  LKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSKGLVEDMN 674
            ++ +KL +  +I++SSS+G+LID KSDSA+TKVVQQIGFLGLQ+ D GKFYSK LVEDM 
Sbjct: 675  IRQVKLRVAEFIVRSSSIGDLIDYKSDSAMTKVVQQIGFLGLQISDRGKFYSKTLVEDMV 734

Query: 673  LHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGLTEPGVLF 494
             HF+ K  +   + PS  +GLI+S F  GL+PYE  VHSIS+REV++RSSRGL+EPG LF
Sbjct: 735  SHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVIVRSSRGLSEPGTLF 794

Query: 493  KNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            KNLMAILRDVVICYDGT+R+ C +SIIQFEYG+KA
Sbjct: 795  KNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKA 829



 Score =  146 bits (368), Expect(2) = 0.0
 Identities = 69/123 (56%), Positives = 90/123 (73%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+NSSWELMKEILLC+VNFKND+ DR++ILYLNDC CG+ YC+E AA  V++
Sbjct: 857  KAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRIILYLNDCGCGRNYCQEKAAYKVKN 916

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HLQK  LKD A    IEY++Q T       D GL GHIH+DK +L+   ++++ I Q C 
Sbjct: 917  HLQKVILKDIANHFMIEYKRQHTI-----ADVGLAGHIHLDKMKLENLKVSMEVIHQKCT 971

Query: 11   DVI 3
            + +
Sbjct: 972  ETV 974


>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Musa acuminata
            subsp. malaccensis] gi|695009141|ref|XP_009391190.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Musa
            acuminata subsp. malaccensis]
            gi|695009143|ref|XP_009391191.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Musa acuminata subsp.
            malaccensis]
          Length = 1738

 Score = 1061 bits (2743), Expect(2) = 0.0
 Identities = 520/820 (63%), Positives = 655/820 (79%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            ME+   SPL++DG +CSIKFSIAT EEIR         SHPSQL NPFLGLP+ESG CE+
Sbjct: 1    MEDQVSSPLVLDGSICSIKFSIATAEEIRTYSISDCPISHPSQLANPFLGLPLESGGCET 60

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGT+E G CEGHFGYI LPIP+YHPSHV+EL+ +LSLVCLKCLR+KK K   + G     
Sbjct: 61   CGTAEIGNCEGHFGYIELPIPVYHPSHVSELRDLLSLVCLKCLRMKKVKY--SVGKGKIS 118

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
            S+ CL C D+PS+SI E +T DGA  LEL++ SRSRL+DGFW+FL+R+G+ Y G    R 
Sbjct: 119  SMPCLYCLDLPSISIKEVKTADGATCLELRVSSRSRLQDGFWSFLDRFGYHYAGTFR-RP 177

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP+EALKIL  +PEET++KL+GKGYF QNGFI+E LPVPPNCL VP+ISDG  +MSSDI
Sbjct: 178  LLPSEALKILEKLPEETQKKLAGKGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSSDI 237

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            S S+L+K+L K+E+IKRSRSG P+FES+E+E NDLQS+++ YM+LRGT K P+D+T++F 
Sbjct: 238  SKSLLKKILGKIELIKRSRSGSPSFESYEVETNDLQSSIALYMNLRGTTKAPRDITRRFA 297

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
               E +   TK WL+K+RTLFIRKGSGFSSRSVI+GD Y G+N +G+P EIA++ITFEE+
Sbjct: 298  FGNETNEYLTKQWLDKIRTLFIRKGSGFSSRSVISGDPYIGINVVGLPSEIAKRITFEER 357

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            VT  N+  LQ +VD++LC+TY+DGS+TYAI  GSKGHT LK+GQVINR+I+DGDIVFINR
Sbjct: 358  VTEHNITRLQNVVDSRLCITYKDGSSTYAISVGSKGHTNLKIGQVINRQILDGDIVFINR 417

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PPSTHKHSLQAF VY+HDDHTVKINPLIC PLGADFDGDCVHIFYPQSL+AKAEV+ELFS
Sbjct: 418  PPSTHKHSLQAFYVYIHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLSAKAEVLELFS 477

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            VEKQ++SSHSGSLNLQLV D              KK  AQQL M+ S ++  PA+VKA  
Sbjct: 478  VEKQLLSSHSGSLNLQLVQDASLALKLIFKSGFIKKEVAQQLGMYVSSMLPPPAIVKATK 537

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
             GP WT LQ+L+ V P+ LD SGER+ I +SEI+++D ++D+VQS+ T+++T I+ +KGP
Sbjct: 538  CGPCWTILQVLQNVFPAFLDCSGERYFIRESEILELDTDQDVVQSLLTDIMTHIYHMKGP 597

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
             E L  FN +QPLLME+LF EG+SI L DF + K+V+ +++ ++Q  S +L +LR   DE
Sbjct: 598  MEVLNFFNYIQPLLMEMLFMEGFSICLKDFILSKAVVSEIQGSIQKNSCILNQLRSRRDE 657

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
              EL+++NHL+S+K P+V +IL SS+LGNLIDSKSDS++ KVV+Q+GFLGLQLFD GK+Y
Sbjct: 658  RAELQVQNHLRSMKDPIVKFILNSSALGNLIDSKSDSSMVKVVEQLGFLGLQLFDQGKYY 717

Query: 700  SKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSR 521
            S+ LV+D  L+F SK   G  D PSEA+GL+++SF  GLNPYE  VH+ISSREV++RSSR
Sbjct: 718  SRALVDDCFLNFVSKHSAGEVDHPSEAYGLVKNSFFHGLNPYEMLVHAISSREVIVRSSR 777

Query: 520  GLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEY 401
            GLTEPG LFKNLMAILRDVVICYDG++R+ C  S++Q EY
Sbjct: 778  GLTEPGTLFKNLMAILRDVVICYDGSVRNVCTGSLVQLEY 817



 Score =  157 bits (396), Expect(2) = 0.0
 Identities = 78/123 (63%), Positives = 95/123 (77%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSSQSNNSSWELMKEILLCKV++KNDV+DR+VILYLNDCCC K++CKENAA  V +
Sbjct: 849  KAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAAFTVLN 908

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
             L++  LKD A +  IEYQKQ    + S   +GLVGHIH+DK +LK  ++   +IL  CQ
Sbjct: 909  CLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDILHKCQ 968

Query: 11   DVI 3
             VI
Sbjct: 969  AVI 971


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 991

 Score = 1050 bits (2715), Expect(2) = 0.0
 Identities = 523/815 (64%), Positives = 650/815 (79%), Gaps = 1/815 (0%)
 Frame = -3

Query: 2830 VDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCGTSEHGKCE 2651
            ++G V  IKF +AT +EI          SH SQL NPFLGLP+E GKCESCGTSE GKCE
Sbjct: 12   LEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCESCGTSEPGKCE 71

Query: 2650 GHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSIQCLSCQDV 2471
            GHFGYI LPIPIYHPSHV+ELKR+LSL+CLKCL++K  K+         R   C  C++ 
Sbjct: 72   GHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKI--KSSGVAERLFSC--CEEA 127

Query: 2470 PSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLLPAEALKIL 2291
              +SI E +TTDGA+ L+LKLPSR RLRDGFWNFL RYGF YG D + R+LLP E L++L
Sbjct: 128  AQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDIT-RTLLPCEVLEML 186

Query: 2290 SSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISVSMLRKVLN 2111
              IP++T++KL+ KGYFPQ+G+I+  +PVPPNCLSVPDISDG ++MSSD+S+SML+KVL 
Sbjct: 187  RRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSISMLKKVLK 246

Query: 2110 KVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVVKEGDNSST 1931
            +VEIIK SRSG PNFESHE+EA DLQSAV QY+ +RGT K  +D+ ++FGV KE ++SST
Sbjct: 247  QVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVHKESNDSST 306

Query: 1930 KAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVTPLNLNHLQ 1751
            KAWLEKMRTLFIRKGSGFSSRSVITGDAY+ VNEIGIP EIAQ+ITFEE+V   N+ +LQ
Sbjct: 307  KAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEERVNAHNMQYLQ 366

Query: 1750 ELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPPSTHKHSLQ 1571
            ELVDNKLC+TYRDGS+TY++REGSKGHT+L++GQ+++RRIMDGD+VFINRPP+THKHSLQ
Sbjct: 367  ELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMVFINRPPTTHKHSLQ 426

Query: 1570 AFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVEKQMISSHS 1391
            A SVYVHD HTVKINPLICGPL ADFDGDC+H+FYPQSLAAKAEV+ELFSVEKQ++SSHS
Sbjct: 427  ALSVYVHDGHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQLLSSHS 486

Query: 1390 GSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMH-TSPLVQLPALVKAYPSGPSWTYLQ 1214
            G+LNLQL  D               +A AQQL+M  +S  +  PAL KA+ S P WT LQ
Sbjct: 487  GNLNLQLTSDSLLSLKTMFNTYFLDRAAAQQLAMFVSSSSLPQPALWKAHCSVPIWTALQ 546

Query: 1213 LLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKEALKVFNL 1034
            +L+T LPS  D SGER+LIS ++I+K+DF+RD+VQ++  +++  +F  KGP    K FN 
Sbjct: 547  ILQTALPSQFDCSGERYLISNTDIVKVDFSRDVVQAVINDIVISMFFEKGPDAVFKFFNS 606

Query: 1033 LQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVVELEIENH 854
            LQPLLME LF EG+S+GL DF I ++ I   +++ + +S LL +LR TY+E++ L++ENH
Sbjct: 607  LQPLLMESLFSEGFSVGLEDFYISRAAIGGTRRDFKVISSLLSQLRSTYNELMALQLENH 666

Query: 853  LKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSKGLVEDMN 674
            ++  KLP+  +I++ SS+G+LID KSDSA+TKVVQQIGFLGLQ+ D GKFY+K LVEDM 
Sbjct: 667  IRRAKLPVADFIVRLSSIGDLIDYKSDSAMTKVVQQIGFLGLQISDRGKFYTKTLVEDMA 726

Query: 673  LHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGLTEPGVLF 494
            LHF+SK +    D PS   GLI+S F  GL+PYE  VHSIS+REV++RS+RGL+EPG LF
Sbjct: 727  LHFESK-YPSDIDYPSAKHGLIQSCFFHGLDPYEEMVHSISAREVMVRSTRGLSEPGTLF 785

Query: 493  KNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            KNLMAILRDVVICYDGT+R+ C +SIIQFEYG+KA
Sbjct: 786  KNLMAILRDVVICYDGTVRNVCSNSIIQFEYGMKA 820



 Score =  134 bits (336), Expect(2) = 0.0
 Identities = 66/123 (53%), Positives = 87/123 (70%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+NSSWELMKEIL C+VNFKND+ DR+VILY N C CGK YC+E  A  V++
Sbjct: 848  KAVLDSTPSSNSSWELMKEILQCRVNFKNDITDRRVILYFNYCGCGKFYCQERLAYSVKN 907

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K  LKD A     EY+ Q T       DAGLVGH+H+ K +L+E +++++ I + C 
Sbjct: 908  HLEKVILKDIALCFMCEYKSQPTI-----ADAGLVGHVHLKKTKLQELNVSMEVIHRKCS 962

Query: 11   DVI 3
            + I
Sbjct: 963  ETI 965


>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
          Length = 2096

 Score = 1040 bits (2689), Expect(2) = 0.0
 Identities = 508/822 (61%), Positives = 647/822 (78%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            ED  +P   + ++  I+F +AT +EI K        SH SQL NPFLGLP+E+GKCESCG
Sbjct: 2    EDSSAPTTFEAKIKGIRFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESCG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            T E G+CEGHFGYI LP PIYHP HV ELKR+LSL+CLKCL+ K            +R  
Sbjct: 62   TGEAGQCEGHFGYIELPTPIYHPDHVGELKRMLSLLCLKCLKFK------------NRKF 109

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
            QC  C++   +SI+E +T+DGA++LELK+PSRSRL++GFW FL +YGF YG D   R LL
Sbjct: 110  QC--CEETSQISINEAKTSDGAYYLELKVPSRSRLQEGFWYFLEKYGFRYG-DMYSRPLL 166

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P+E + IL  IP+ETKRKLS KGYFPQ+G+IL+ LPVPPNCLSVPDISDG + MS+D S+
Sbjct: 167  PSEVMAILRKIPQETKRKLSAKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSI 226

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            ++L+KVL +VEIIK SRSG PNFESHEIEANDLQ+AV+QY+  RGT K  +D+  +FGV 
Sbjct: 227  TLLKKVLRQVEIIKNSRSGKPNFESHEIEANDLQAAVAQYLQFRGTGKASRDVDTRFGVN 286

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            KE + SSTKAWLEKM+TLFIRKGSGFSSRSVITGD ++GV+EIG+P EIAQKITFEE+V 
Sbjct: 287  KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 346

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+  LQ+LVD KLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 347  QHNMQFLQKLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 406

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSL AKAEVVELFSVE
Sbjct: 407  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 466

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSH+G+ NLQL  D               +A AQQL+M    ++  PA+VK+  SG
Sbjct: 467  KQLLSSHTGNFNLQLATDSLLSLKILLRNYFLNRAAAQQLAMFVPSVLPKPAVVKS-DSG 525

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT  Q+L+T LPS  D SGERH+IS+SEI+ ++FNRD++ SI  +++T +F +KGPKE
Sbjct: 526  PLWTASQILQTTLPSSFDCSGERHIISKSEILSLEFNRDVMASILNDIVTSLFFLKGPKE 585

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L+ FN +QPLLME L+ EG+S+ L DF +P+ V+  +++N+Q +SPLLY LR +Y E +
Sbjct: 586  VLRFFNSIQPLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRASYSESI 645

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            +L+++ +L+S+K+P+  ++LKSS++G+LIDSKS+SA++KVVQQIGFLG+Q+ D GKFYS+
Sbjct: 646  DLQLDTYLRSMKIPVTNFVLKSSAIGHLIDSKSESALSKVVQQIGFLGVQISDKGKFYSE 705

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LV+DM+  FQ K +    D P+E FGL+      GL+PY+  VHSISSREV++RS+RGL
Sbjct: 706  MLVKDMSSLFQKK-YPSCDDYPTEEFGLVGRPLFRGLDPYQEMVHSISSREVIVRSTRGL 764

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            TEPG LFKNLMAILRDVVICYDGT+R+ C +SIIQFEYG+ +
Sbjct: 765  TEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYGVSS 806



 Score =  146 bits (369), Expect(2) = 0.0
 Identities = 69/123 (56%), Positives = 97/123 (78%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWE+MKEILLC V+FKND++DR+VILYLN C CG+K+C+E AA +V++
Sbjct: 833  KAVLDSSPSSNSSWEMMKEILLCGVSFKNDISDRRVILYLNSCDCGRKHCQETAALIVKN 892

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
             L+K  LKD A +  IEY+ Q    + +E+D GLVGHIH++K +L +S++++  IL+ CQ
Sbjct: 893  QLKKVSLKDTAIEFLIEYRSQMAH-DSTEIDPGLVGHIHLNKTQLIQSNISMHGILEQCQ 951

Query: 11   DVI 3
            + I
Sbjct: 952  ETI 954


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score = 1038 bits (2685), Expect(2) = 0.0
 Identities = 517/822 (62%), Positives = 634/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S   VDG +  I F +AT  EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE GKCEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCLR+K    +++    +    
Sbjct: 62   TSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLLA 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA  LELK PSR       W FL +YGF YG   + R+LL
Sbjct: 122  SC--CENAPQVSIKEVKTTDGACSLELKQPSRQARTS--WEFLEKYGFRYGDHHNTRTLL 177

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP ET+RKLSGKG+FPQ G+IL  LPVPPNCLSVPDISDG +IMSSD+S 
Sbjct: 178  PCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLST 237

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            +ML+KVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  +++  ++G+ 
Sbjct: 238  AMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGIS 297

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSR VITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 298  KDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVN 357

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDGS+TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 358  MHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 417

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSLAAKAEV ELFSVE
Sbjct: 418  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVE 477

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSH+G+LNLQL  D              KKA AQQLSM  S  +  PA +K    G
Sbjct: 478  KQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFG 537

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT LQ+L+T  P+ LD SG+R+LIS+S+I+ +DF+RDL+QS+  E++T IF  KGPKE
Sbjct: 538  PCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKE 597

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+S+ L DF + + VI  +++++QD+SPLLY+LR TY+E+V
Sbjct: 598  VLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELV 657

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
             L++ENH++  K P+  +IL SS+LG+LIDSKSDS + KVVQQIGFLGLQL + GKFYSK
Sbjct: 658  GLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSK 717

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   + G D PS  FGLI+S F  GL+PYE  VHSIS+REV++RSSRGL
Sbjct: 718  TLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGL 777

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 778  SEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNA 819



 Score =  153 bits (387), Expect(2) = 0.0
 Identities = 74/123 (60%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+NSSWELMKEILLCKV+ KND+ DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 845  KAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQENAAYLVKN 904

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K +LKD A ++  EY++Q+T   +SE +AGLVGHI ++K  LKE ++++QE+   CQ
Sbjct: 905  HLRKVKLKDTAVELIFEYKQQQT---VSESEAGLVGHILLNKAVLKELNISMQEVHMKCQ 961

Query: 11   DVI 3
            + I
Sbjct: 962  ETI 964


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score = 1038 bits (2685), Expect(2) = 0.0
 Identities = 517/822 (62%), Positives = 634/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S   VDG +  I F +AT  EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE GKCEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCLR+K    +++    +    
Sbjct: 62   TSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLLA 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA  LELK PSR       W FL +YGF YG   + R+LL
Sbjct: 122  SC--CENAPQVSIKEVKTTDGACSLELKQPSRQARTS--WEFLEKYGFRYGDHHNTRTLL 177

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP ET+RKLSGKG+FPQ G+IL  LPVPPNCLSVPDISDG +IMSSD+S 
Sbjct: 178  PCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLST 237

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            +ML+KVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  +++  ++G+ 
Sbjct: 238  AMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGIS 297

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSR VITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 298  KDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVN 357

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDGS+TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 358  MHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 417

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSLAAKAEV ELFSVE
Sbjct: 418  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVE 477

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSH+G+LNLQL  D              KKA AQQLSM  S  +  PA +K    G
Sbjct: 478  KQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFG 537

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT LQ+L+T  P+ LD SG+R+LIS+S+I+ +DF+RDL+QS+  E++T IF  KGPKE
Sbjct: 538  PCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKE 597

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+S+ L DF + + VI  +++++QD+SPLLY+LR TY+E+V
Sbjct: 598  VLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELV 657

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
             L++ENH++  K P+  +IL SS+LG+LIDSKSDS + KVVQQIGFLGLQL + GKFYSK
Sbjct: 658  GLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSK 717

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   + G D PS  FGLI+S F  GL+PYE  VHSIS+REV++RSSRGL
Sbjct: 718  TLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGL 777

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 778  SEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNA 819



 Score =  153 bits (387), Expect(2) = 0.0
 Identities = 74/123 (60%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+NSSWELMKEILLCKV+ KND+ DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 845  KAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQENAAYLVKN 904

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K +LKD A ++  EY++Q+T   +SE +AGLVGHI ++K  LKE ++++QE+   CQ
Sbjct: 905  HLRKVKLKDTAVELIFEYKQQQT---VSESEAGLVGHILLNKAVLKELNISMQEVHMKCQ 961

Query: 11   DVI 3
            + I
Sbjct: 962  ETI 964


>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Gossypium raimondii]
          Length = 1921

 Score = 1035 bits (2676), Expect(2) = 0.0
 Identities = 514/822 (62%), Positives = 637/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S +I+DG +  IKF +AT +EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSSVILDGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE G+CEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K    +++         
Sbjct: 62   TSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLLS 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA +LELK PSR    +  WNFL RYGF YG D   R+LL
Sbjct: 122  SC--CENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYG-DHHTRTLL 176

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP +T+RKLSGKG+FPQ G+IL+ LPVPPNCLSVPD+SDG ++MSSD+S 
Sbjct: 177  PCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLST 236

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            SMLRKVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  + +  ++GV 
Sbjct: 237  SMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVN 296

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSRSVITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 297  KDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVN 356

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 357  MHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 416

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSL+AKAEV ELFSVE
Sbjct: 417  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVE 476

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSHSG+LNLQL  D              KKA AQQLSM  S  +  PA +K     
Sbjct: 477  KQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVA 536

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT  Q+L+T  P+ LD S +R+LI +S+I+K+DFN+DL+QS+  E++  IF  KGPKE
Sbjct: 537  PCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKE 596

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+++ L DF + + VI  +++++Q +SPLLY+LR TY+E+V
Sbjct: 597  VLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELV 656

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            EL++ENH++  K P+  +ILK+SSLGNLIDS+SDSA+ KVVQQIGFLG+QL D GKFYSK
Sbjct: 657  ELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSK 716

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   +   D PS  FGLI+S F  GL+PYE  VHSIS+REV++RS+RGL
Sbjct: 717  TLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGL 776

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 777  SEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA 818



 Score =  161 bits (407), Expect(2) = 0.0
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEILLCKV+FKND  DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 844  KAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQENAAYLVKN 903

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL++ +LKD A D  IEYQ+Q+    +SE++AGLVGHI ++K  LKE S++VQEI   CQ
Sbjct: 904  HLRRVKLKDIAVDFIIEYQQQQI---VSEIEAGLVGHILLNKDLLKELSVSVQEIHMKCQ 960

Query: 11   DVI 3
            + I
Sbjct: 961  ETI 963


>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score = 1035 bits (2676), Expect(2) = 0.0
 Identities = 514/822 (62%), Positives = 637/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S +I+DG +  IKF +AT +EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSSVILDGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE G+CEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K    +++         
Sbjct: 62   TSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLLS 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA +LELK PSR    +  WNFL RYGF YG D   R+LL
Sbjct: 122  SC--CENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYG-DHHTRTLL 176

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP +T+RKLSGKG+FPQ G+IL+ LPVPPNCLSVPD+SDG ++MSSD+S 
Sbjct: 177  PCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLST 236

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            SMLRKVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  + +  ++GV 
Sbjct: 237  SMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVN 296

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSRSVITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 297  KDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVN 356

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 357  MHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 416

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSL+AKAEV ELFSVE
Sbjct: 417  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVE 476

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSHSG+LNLQL  D              KKA AQQLSM  S  +  PA +K     
Sbjct: 477  KQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVA 536

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT  Q+L+T  P+ LD S +R+LI +S+I+K+DFN+DL+QS+  E++  IF  KGPKE
Sbjct: 537  PCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKE 596

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+++ L DF + + VI  +++++Q +SPLLY+LR TY+E+V
Sbjct: 597  VLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELV 656

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            EL++ENH++  K P+  +ILK+SSLGNLIDS+SDSA+ KVVQQIGFLG+QL D GKFYSK
Sbjct: 657  ELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSK 716

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   +   D PS  FGLI+S F  GL+PYE  VHSIS+REV++RS+RGL
Sbjct: 717  TLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGL 776

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 777  SEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA 818



 Score =  161 bits (407), Expect(2) = 0.0
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEILLCKV+FKND  DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 844  KAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQENAAYLVKN 903

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL++ +LKD A D  IEYQ+Q+    +SE++AGLVGHI ++K  LKE S++VQEI   CQ
Sbjct: 904  HLRRVKLKDIAVDFIIEYQQQQI---VSEIEAGLVGHILLNKDLLKELSVSVQEIHMKCQ 960

Query: 11   DVI 3
            + I
Sbjct: 961  ETI 963


>gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1406

 Score = 1035 bits (2676), Expect(2) = 0.0
 Identities = 514/822 (62%), Positives = 637/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S +I+DG +  IKF +AT +EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSSVILDGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE G+CEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K    +++         
Sbjct: 62   TSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLLS 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA +LELK PSR    +  WNFL RYGF YG D   R+LL
Sbjct: 122  SC--CENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYG-DHHTRTLL 176

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP +T+RKLSGKG+FPQ G+IL+ LPVPPNCLSVPD+SDG ++MSSD+S 
Sbjct: 177  PCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLST 236

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            SMLRKVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  + +  ++GV 
Sbjct: 237  SMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVN 296

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSRSVITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 297  KDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVN 356

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 357  MHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 416

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSL+AKAEV ELFSVE
Sbjct: 417  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVE 476

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSHSG+LNLQL  D              KKA AQQLSM  S  +  PA +K     
Sbjct: 477  KQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVA 536

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT  Q+L+T  P+ LD S +R+LI +S+I+K+DFN+DL+QS+  E++  IF  KGPKE
Sbjct: 537  PCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKE 596

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+++ L DF + + VI  +++++Q +SPLLY+LR TY+E+V
Sbjct: 597  VLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELV 656

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            EL++ENH++  K P+  +ILK+SSLGNLIDS+SDSA+ KVVQQIGFLG+QL D GKFYSK
Sbjct: 657  ELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSK 716

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   +   D PS  FGLI+S F  GL+PYE  VHSIS+REV++RS+RGL
Sbjct: 717  TLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGL 776

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 777  SEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA 818



 Score =  161 bits (407), Expect(2) = 0.0
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEILLCKV+FKND  DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 844  KAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQENAAYLVKN 903

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL++ +LKD A D  IEYQ+Q+    +SE++AGLVGHI ++K  LKE S++VQEI   CQ
Sbjct: 904  HLRRVKLKDIAVDFIIEYQQQQI---VSEIEAGLVGHILLNKDLLKELSVSVQEIHMKCQ 960

Query: 11   DVI 3
            + I
Sbjct: 961  ETI 963


>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Gossypium raimondii] gi|763800932|gb|KJB67887.1|
            hypothetical protein B456_010G216600 [Gossypium
            raimondii]
          Length = 1966

 Score = 1035 bits (2676), Expect(2) = 0.0
 Identities = 514/822 (62%), Positives = 637/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S +I+DG +  IKF +AT +EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSSVILDGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE G+CEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K    +++         
Sbjct: 62   TSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLLS 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA +LELK PSR    +  WNFL RYGF YG D   R+LL
Sbjct: 122  SC--CENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYG-DHHTRTLL 176

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP +T+RKLSGKG+FPQ G+IL+ LPVPPNCLSVPD+SDG ++MSSD+S 
Sbjct: 177  PCEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLST 236

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            SMLRKVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  + +  ++GV 
Sbjct: 237  SMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVN 296

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSRSVITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 297  KDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVN 356

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 357  MHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 416

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSL+AKAEV ELFSVE
Sbjct: 417  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVE 476

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSHSG+LNLQL  D              KKA AQQLSM  S  +  PA +K     
Sbjct: 477  KQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVA 536

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT  Q+L+T  P+ LD S +R+LI +S+I+K+DFN+DL+QS+  E++  IF  KGPKE
Sbjct: 537  PCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKE 596

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+++ L DF + + VI  +++++Q +SPLLY+LR TY+E+V
Sbjct: 597  VLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELV 656

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            EL++ENH++  K P+  +ILK+SSLGNLIDS+SDSA+ KVVQQIGFLG+QL D GKFYSK
Sbjct: 657  ELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSK 716

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   +   D PS  FGLI+S F  GL+PYE  VHSIS+REV++RS+RGL
Sbjct: 717  TLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGL 776

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 777  SEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA 818



 Score =  161 bits (407), Expect(2) = 0.0
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEILLCKV+FKND  DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 844  KAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQENAAYLVKN 903

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL++ +LKD A D  IEYQ+Q+    +SE++AGLVGHI ++K  LKE S++VQEI   CQ
Sbjct: 904  HLRRVKLKDIAVDFIIEYQQQQI---VSEIEAGLVGHILLNKDLLKELSVSVQEIHMKCQ 960

Query: 11   DVI 3
            + I
Sbjct: 961  ETI 963


>gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
            arboreum]
          Length = 1996

 Score = 1031 bits (2667), Expect(2) = 0.0
 Identities = 513/822 (62%), Positives = 637/822 (77%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S +I+DG +  IKF +A+ +EI          +H SQL N +LGLP+E GKC +CG
Sbjct: 2    EENSSSVILDGEIVGIKFCLASPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSACG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE G+CEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K    +++         
Sbjct: 62   TSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLLS 121

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
             C  C++ P +SI E +TTDGA +LELK PSR    +  WNFL RYGF YG D   R+LL
Sbjct: 122  SC--CENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYG-DHHTRTLL 176

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
            P E ++IL  IP +T+RKLSGKG+FPQ G+IL+ LPVPPNCLSVPD+SDG ++MSSD+S 
Sbjct: 177  PCEVVEILKRIPAQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGISVMSSDLST 236

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            SMLRKVL +VEIIK SRSG PNFESHE+EANDLQSAV QY+ +RGT K  + +  ++GV 
Sbjct: 237  SMLRKVLKQVEIIKSSRSGNPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVN 296

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            K+  +SSTKAWLEKMRTLFIRKGSGFSSRSVITGD Y+ VNEIGIP EIAQ+ITFEE+V 
Sbjct: 297  KDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVN 356

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+ +LQ LVDNKLC+TYRDG +TY++REGSKGHT+L+ GQV++RRIMDGDIVFINRPP
Sbjct: 357  MHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPP 416

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSL+AKAEV ELFSVE
Sbjct: 417  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVE 476

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSHSG+LNLQL  D              KKA AQQLSM  S  +  PA +K     
Sbjct: 477  KQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKGNHVA 536

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT  Q+L+T  P+ LD S +R+LI +S+I+K+DFN+DL+QS+  E++  IF  KGPKE
Sbjct: 537  PCWTAFQILQTAFPACLDCSCDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKE 596

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L  F+ LQPLLME +F EG+++ L DF + + VI  +++++Q +SPLLY+LR TY+E+V
Sbjct: 597  VLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELV 656

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            EL++ENH++  K P+  +ILK+SSLGNLIDS+SDSA+ KVVQQIGFLG+QL D GKFYSK
Sbjct: 657  ELQMENHIRVAKAPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSK 716

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+   FQS   +   D PS  FGLI+S F  GL+PYE  VHSIS+REV++RS+RGL
Sbjct: 717  TLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGL 776

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMAILRDVVICYDGT+R+   +SIIQF+YGL A
Sbjct: 777  SEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSA 818



 Score =  161 bits (407), Expect(2) = 0.0
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEILLCKV+FKND  DR+VILYL DC CG+KYC+ENAA LV++
Sbjct: 844  KAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQENAAYLVKN 903

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL++ +LKD A D  IEYQ+Q+    +SE++AGLVGHI ++K  LKE S++VQEI   CQ
Sbjct: 904  HLRRVKLKDIAVDFIIEYQQQQI---VSEIEAGLVGHILLNKDLLKELSVSVQEIHMKCQ 960

Query: 11   DVI 3
            + I
Sbjct: 961  ETI 963


>ref|XP_010032299.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Eucalyptus
            grandis] gi|702477429|ref|XP_010032300.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1 [Eucalyptus
            grandis] gi|629085358|gb|KCW51715.1| hypothetical protein
            EUGRSUZ_J01182 [Eucalyptus grandis]
          Length = 1814

 Score = 1025 bits (2649), Expect(2) = 0.0
 Identities = 507/822 (61%), Positives = 647/822 (78%), Gaps = 1/822 (0%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEE   + L  D  + +I F +A+ +EI          +H SQL NPFLGLP+E G+CES
Sbjct: 1    MEETSTAAL--DAEITAISFGLASRQEICAASVSDCSITHSSQLSNPFLGLPLEFGRCES 58

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKM-LRTQGNKNS 2504
            CGTS+ GKCEGHFGYI LPIPIYHPSHV+ELKR+LSL+CLKCL+++  K  ++  G    
Sbjct: 59   CGTSDPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKMRNNKFPIKNAGVGER 118

Query: 2503 RSIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCR 2324
                C  C+D   +S+ E +T++G   L+LK+ SRSRLRDGFWNFL RYGF YG D+  R
Sbjct: 119  LLASC--CEDAAQVSMREVKTSEGVHCLQLKVSSRSRLRDGFWNFLERYGFRYG-DNISR 175

Query: 2323 SLLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSD 2144
             LLP E +++L  IPEETKRKL+GKGYFPQ G+I++ LPVPPNCLSVP++SDG ++MSSD
Sbjct: 176  PLLPCEVVEMLKRIPEETKRKLAGKGYFPQEGYIIQYLPVPPNCLSVPEVSDGVSVMSSD 235

Query: 2143 ISVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKF 1964
            +SV+ML+KVL +VEIIK SRSG PNFESH++EA DLQ+ V++Y+ +RGT K  +D+  ++
Sbjct: 236  LSVTMLKKVLKQVEIIKGSRSGAPNFESHDVEAQDLQNVVNEYLLVRGTAKASRDIDTRY 295

Query: 1963 GVVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEE 1784
            G+ KE  +++TKAWLEKMRTLFIRKGSGFSSRSVITGDA++ VNEIGIP EIAQ+ITFEE
Sbjct: 296  GIGKEPSDTATKAWLEKMRTLFIRKGSGFSSRSVITGDAFKKVNEIGIPAEIAQRITFEE 355

Query: 1783 KVTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFIN 1604
            KV+  N+++LQ LVD KLC+ YRDGSA Y++REGSKGHT L+ GQV++RRIMDGDIVFIN
Sbjct: 356  KVSMYNMDYLQGLVDKKLCLAYRDGSAMYSLREGSKGHTSLRPGQVVHRRIMDGDIVFIN 415

Query: 1603 RPPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELF 1424
            RPP+THKHSLQA SVYVHDDHTVKINPLICGPLGADFDGDCVH+FYPQS +AKAEVVELF
Sbjct: 416  RPPTTHKHSLQALSVYVHDDHTVKINPLICGPLGADFDGDCVHLFYPQSASAKAEVVELF 475

Query: 1423 SVEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAY 1244
            SVEKQ++SSHSG+LNLQL  D               K  AQQL+M  S  +  PAL+KA+
Sbjct: 476  SVEKQLLSSHSGNLNLQLATDSLLSLKMMFRKYFFDKLAAQQLAMFVSSDLPHPALLKAH 535

Query: 1243 PSGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKG 1064
               P+WT LQ+L+T LP+  +  G+++LIS+S+++ +D++R+ +  + +E++T IF  K 
Sbjct: 536  QFCPTWTALQMLQTALPAGFNCCGDKYLISKSDLLDVDYSREFIVPMISEIVTSIFFEKS 595

Query: 1063 PKEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYD 884
            P E LK F+ LQPLLME LF EG+S+ L DF IP+S+I  +++N+Q +SPLLY LR T++
Sbjct: 596  PVEVLKFFDALQPLLMENLFTEGFSVCLEDFYIPQSMIQDIQKNIQVISPLLYHLRTTHN 655

Query: 883  EVVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKF 704
            E+V+L++ENHL+  KLPL  +ILKSS+LG+L+DSKSDSAI K++QQIGFLG+Q+ D GKF
Sbjct: 656  ELVQLQLENHLRLAKLPLSRFILKSSALGDLVDSKSDSAINKIIQQIGFLGVQISDKGKF 715

Query: 703  YSKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSS 524
            YS  L ++M   F+SK    GAD PS  +GLI+SSFI GL+PYE  VHSI +REV++RS+
Sbjct: 716  YSTSLFDEMASLFRSKYFFEGADYPSGEYGLIKSSFICGLDPYEMMVHSICTREVIVRST 775

Query: 523  RGLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYG 398
            RGL+EPG LFKNLMAILRDVVICYDGT+R+ C +SIIQFEYG
Sbjct: 776  RGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYG 817



 Score =  155 bits (392), Expect(2) = 0.0
 Identities = 73/123 (59%), Positives = 96/123 (78%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+NSSWELMKEIL C+VNF+N+  DR+VILYLN C CG+K+C ENAACLV++
Sbjct: 848  KAVLDSSPSSNSSWELMKEILQCRVNFRNEPIDRRVILYLNRCGCGRKHCSENAACLVKT 907

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K  LKD      IEY++ +T  E SE  AGLVGHIH+D+  LKE ++++ ++L+ CQ
Sbjct: 908  HLKKVSLKDLTVGFMIEYKELQTVLESSEAHAGLVGHIHLDEVHLKELNISMVDVLKQCQ 967

Query: 11   DVI 3
            + I
Sbjct: 968  ETI 970


>ref|XP_011655250.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
            gi|778702723|ref|XP_011655251.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis sativus]
            gi|700195913|gb|KGN51090.1| hypothetical protein
            Csa_5G435050 [Cucumis sativus]
          Length = 1963

 Score = 1024 bits (2647), Expect(2) = 0.0
 Identities = 504/833 (60%), Positives = 636/833 (76%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEE P    I+D  +  I+FS+A  +EI          +H SQL NPFLGLP+E GKCES
Sbjct: 1    MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGTSE GKCEGHFGYI LPIPIYHP+H+ ELK++LSL+CLKCL++KK K          R
Sbjct: 61   CGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTKFPSKNIGFAER 120

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
             +    C+D   ++I E +  DGA +L+LK+PSR+ L++ FW+FL RYGF YG D+  R+
Sbjct: 121  LLSSC-CEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYG-DNFTRT 178

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP E  ++L  IP ET++KL+G+GY+PQ+G+IL+ LPVPPNCLSVP+ISDG  +MSSD 
Sbjct: 179  LLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDP 238

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            +VSML+K+L +VEIIK SRSG PNFESHE+EANDLQ AV QY+ +RGT K  + +  +FG
Sbjct: 239  AVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFG 298

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
            V KE ++ STKAWLEKMRTLFIRKGSGFSSRSVITGDAY+ VNEIG+P E+AQ+ITFEE+
Sbjct: 299  VNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEER 358

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            V+  N+ +LQELVD KLC+TYRDGS+ Y++REGS GHTYLK GQ+++RRIMDGDIVFINR
Sbjct: 359  VSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINR 418

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PP+THKHSLQA  VY+HDDH VKINPLICGPL ADFDGDC+H+FYPQS+AAKAEV+ LFS
Sbjct: 419  PPTTHKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFS 478

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            VEKQ++SSHSG+LNLQL +D               KA AQQL+M  S  +  PAL+    
Sbjct: 479  VEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRS 538

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
                WT LQ+L+TVLP+  D  G+ +LI  S  +K DF+RD + S+  E++T IF  KGP
Sbjct: 539  GSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSIFFQKGP 598

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
            +E LK F+ LQPLLME +F EG+S+GL+D+ +P + +  L++N+Q +SPLLY+LR T++E
Sbjct: 599  EEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNE 658

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
            +VEL++ENHL+S+K+P   +ILK SSLG L DSKS+SAI KVVQQIGFLGLQL D G+FY
Sbjct: 659  LVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFY 718

Query: 700  SKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSR 521
            SK L+ED+   F ++  +   D PS  FGL++  F  GL+PYE  VHSIS+REV++RSSR
Sbjct: 719  SKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSR 778

Query: 520  GLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKAXXXXXXRLF 362
            GLTEPG LFKNLMAILRDVVICYDGT+R+ C +SIIQ EYG+KA       LF
Sbjct: 779  GLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLF 831



 Score =  149 bits (376), Expect(2) = 0.0
 Identities = 71/123 (57%), Positives = 95/123 (77%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+NSSW++MKEILLCKV+FKN+  DR+VILYLN+C CG+KYC ENAA +V+S
Sbjct: 851  KAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKS 910

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K  LKD A D  IEY +Q   P  S L  GLVGH+H+++  LKE ++ + E+L+ CQ
Sbjct: 911  HLKKVTLKDAAMDFMIEYNRQ---PTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQ 967

Query: 11   DVI 3
            + +
Sbjct: 968  ETM 970


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score = 1020 bits (2638), Expect(2) = 0.0
 Identities = 510/825 (61%), Positives = 634/825 (76%), Gaps = 2/825 (0%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            M+E+  S  I DG +  I+F +AT +EI          SH SQL NPFLGLP+E GKCES
Sbjct: 1    MDENSQSS-IFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCES 59

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGTSE GKCEGHFG+I+LPIPIYHPSH++ELKR+LSL+CLKCL++K+ K+         R
Sbjct: 60   CGTSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAER 119

Query: 2500 SIQC--LSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSC 2327
             + C  +S ++   +SI E + TDGA FLELKLPSRSRLRDG WNFL RYGF YG D + 
Sbjct: 120  LLSCCEVSIKECAQISIREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFT- 178

Query: 2326 RSLLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSS 2147
            R LLP E ++IL  IP ET++KLSGKGYFPQ+G+IL+ LPVPPNCLSVP +SDG  +MSS
Sbjct: 179  RPLLPCEVMQILKRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSS 238

Query: 2146 DISVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQK 1967
            D+S+SML+KVL + E+I+ SRSG PNF++H+ EA  LQS V QY+ +RGT K  +D+  +
Sbjct: 239  DLSISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTR 298

Query: 1966 FGVVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFE 1787
            +GV KE   S+TKAWLEKMRTLFIRKGSGFSSRSVITGDAY  VN++GIP EIAQ+ITFE
Sbjct: 299  YGVKKESSESTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFE 358

Query: 1786 EKVTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFI 1607
            E+V+  N+ +LQELVDNKLC+TY+DGS+TY++REGSKGHT+L+ GQV++RRIMDGDIVFI
Sbjct: 359  ERVSVHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFI 418

Query: 1606 NRPPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVEL 1427
            NRPP+THKHSLQA SVYVHDDH VKINPLICGPL ADFDGDCVH+FYPQSLAAKAEV+EL
Sbjct: 419  NRPPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLEL 478

Query: 1426 FSVEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKA 1247
            FSVEKQ++SSHSG+LNLQL  D               K+ AQQL+M  SP +  PAL+K 
Sbjct: 479  FSVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPALLKV 538

Query: 1246 YPSGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVK 1067
                P WT  Q+L+  LP+  + SGER LI  S  +K+DFNRD+V S+  E++  +F  K
Sbjct: 539  NCFFPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISMFFEK 598

Query: 1066 GPKEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTY 887
            G    LK FN LQP+LME LF EG+S+ L DF I ++V  ++ ++ + +SPLL  LR T+
Sbjct: 599  GSGAVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPLLCNLRSTF 658

Query: 886  DEVVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGK 707
            +E+VEL++ENH++ +K P+  +IL SS+LG LIDSKSD+A+TKVVQQIGFLGLQ+ D GK
Sbjct: 659  NELVELQVENHIRDVKQPVREFILTSSALGYLIDSKSDAAVTKVVQQIGFLGLQVSDRGK 718

Query: 706  FYSKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRS 527
             YSK LVED+  HF SK      D PS  +GLI++SF  GL+ YE   HSIS+REV++RS
Sbjct: 719  LYSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVIVRS 778

Query: 526  SRGLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLK 392
            SRGL+EPG LFKNLMAILRDVVICYDGT+R+   +SIIQFEYG+K
Sbjct: 779  SRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVK 823



 Score =  154 bits (389), Expect(2) = 0.0
 Identities = 72/123 (58%), Positives = 96/123 (78%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+N SW++MKEILLCKV FKND+ DR+VILYLNDC CG+ YC+E AA LV++
Sbjct: 852  KAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCGCGRNYCQERAAYLVKN 911

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K  LKD A    IEY+ Q+  PE    DAGLVGH+H+DK++L++ ++T Q IL+ CQ
Sbjct: 912  HLEKVSLKDIAKCFMIEYKSQQ-IPESFGSDAGLVGHVHLDKRKLQDLNITAQVILEKCQ 970

Query: 11   DVI 3
            + +
Sbjct: 971  ETV 973


>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
          Length = 1964

 Score = 1019 bits (2634), Expect(2) = 0.0
 Identities = 501/833 (60%), Positives = 635/833 (76%)
 Frame = -3

Query: 2860 MEEDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCES 2681
            MEE P    I+D  +  I+FS+A  +EI          +H SQL NPFLGLP+E GKCES
Sbjct: 1    MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 2680 CGTSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSR 2501
            CGTSE GKCEGHFGYI LPIPIYHP+H+ EL+++LSL+CLKCL++KK K          R
Sbjct: 61   CGTSEPGKCEGHFGYIELPIPIYHPNHITELRKMLSLLCLKCLKMKKTKFPSKNIGFAER 120

Query: 2500 SIQCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRS 2321
             +    C+D   ++I E +  DGA +L+LK+PSR+ L++ FW+FL RYGF YG D+  R+
Sbjct: 121  LLSSC-CEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYG-DNFTRT 178

Query: 2320 LLPAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDI 2141
            LLP E  ++L  IP ET++KL+G+GY+PQ+G+IL+ LPVPPNCLSVP+ISDG  +MSSD 
Sbjct: 179  LLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDP 238

Query: 2140 SVSMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFG 1961
            +VSML+K+L +VEIIK SRSG PNFESHE+EANDLQ AV QY+ +RGT K  + +  +FG
Sbjct: 239  AVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFG 298

Query: 1960 VVKEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEK 1781
            V KE ++ STKAWLEKMRTLFIRKGSGFSSRSVITGDAY+ VNEIG+P E+AQ+ITFEE+
Sbjct: 299  VNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEER 358

Query: 1780 VTPLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINR 1601
            V+  N+ +LQELVD KLC+TYRDGS+ Y++REGS GHTYLK GQ+++RRIMDGDIVFINR
Sbjct: 359  VSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINR 418

Query: 1600 PPSTHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFS 1421
            PP+THKHSLQA  VY+HDDH VKINPLICG L ADFDGDC+H+FYPQS+AAKAEV+ LFS
Sbjct: 419  PPTTHKHSLQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEVLGLFS 478

Query: 1420 VEKQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYP 1241
            VEKQ++SSHSG+LNLQL +D               KA AQQL+M  S  +  PAL+    
Sbjct: 479  VEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRS 538

Query: 1240 SGPSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGP 1061
                WT LQ+L+TVLP+  D  G+ +LI  S  +K DF++D + S+  E++T IF  KGP
Sbjct: 539  GSLHWTALQILQTVLPACFDCHGDSYLIKNSNFLKFDFDKDAMPSLINEILTSIFFQKGP 598

Query: 1060 KEALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDE 881
            +E LK F+ LQPLLME +F EG+S+GL+D+ +P + +  L++N+Q +SPLLY+LR T++E
Sbjct: 599  EEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRSTFNE 658

Query: 880  VVELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFY 701
            +VEL++ENHL+S+K+P   +ILK SSLG L DSKS+SAI KVVQQIGFLGLQL D G+FY
Sbjct: 659  LVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSDKGRFY 718

Query: 700  SKGLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSR 521
            SK L+ED+   F ++  +   D PS  FGL++  F  GL+PYE  VHSIS+REV++RSSR
Sbjct: 719  SKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSR 778

Query: 520  GLTEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKAXXXXXXRLF 362
            GLTEPG LFKNLMAILRDVVICYDGT+R+ C +SIIQ EYG+KA       LF
Sbjct: 779  GLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLF 831



 Score =  150 bits (379), Expect(2) = 0.0
 Identities = 71/123 (57%), Positives = 95/123 (77%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDS+ S+NSSW++MKEILLCKV+FKN+  DR+VILYLN+C CG+KYC ENAA +V+S
Sbjct: 851  KAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKS 910

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
            HL+K  LKD A D  IEY +Q   P  S L  GLVGH+H+++  LKE ++ + E+L+ CQ
Sbjct: 911  HLKKVTLKDVAVDFMIEYNRQ---PTPSGLGPGLVGHVHLNRMLLKELNINMTEVLRRCQ 967

Query: 11   DVI 3
            + +
Sbjct: 968  ETM 970


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score = 1018 bits (2632), Expect(2) = 0.0
 Identities = 505/822 (61%), Positives = 644/822 (78%)
 Frame = -3

Query: 2854 EDPPSPLIVDGRVCSIKFSIATLEEIRKXXXXXXXXSHPSQLMNPFLGLPVESGKCESCG 2675
            E+  S  I++G++  I+F +AT +EI          SH SQL NPFLGLP+E GKCESCG
Sbjct: 2    EENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESCG 61

Query: 2674 TSEHGKCEGHFGYINLPIPIYHPSHVNELKRILSLVCLKCLRIKKGKMLRTQGNKNSRSI 2495
            TSE GKCEGHFGYI LPIPIYHPSH++ELKR+LSL+CLKCL++K  K L+ + +  ++ +
Sbjct: 62   TSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTK-LQIKNDGVAQRL 120

Query: 2494 QCLSCQDVPSLSISEGRTTDGAFFLELKLPSRSRLRDGFWNFLNRYGFPYGGDSSCRSLL 2315
                C++   +SI + +TTDGAF+LELKLPS+ RL  GFWNFL RYGF YG DS  R+LL
Sbjct: 121  LSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYG-DSLTRTLL 179

Query: 2314 PAEALKILSSIPEETKRKLSGKGYFPQNGFILESLPVPPNCLSVPDISDGTNIMSSDISV 2135
             +E  ++L  IPEET++KL+GKGYFPQ+G+ILE LPVPPNCLSVPDISDG + MSSD+S+
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 2134 SMLRKVLNKVEIIKRSRSGIPNFESHEIEANDLQSAVSQYMHLRGTPKVPQDMTQKFGVV 1955
            +ML+KVL +VEII+ SRSG PNFES E+E+NDLQ AV QY+ +RGT K  +D+  +FGV 
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVS 299

Query: 1954 KEGDNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYRGVNEIGIPIEIAQKITFEEKVT 1775
            ++  NS+TKAWLEKMRTLFIRKGSGFSSRSVITGDAY+ VNEIG+P EIAQ+ITFEE+V 
Sbjct: 300  QD-PNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 1774 PLNLNHLQELVDNKLCVTYRDGSATYAIREGSKGHTYLKVGQVINRRIMDGDIVFINRPP 1595
              N+N+LQELVDNKLC+TY DGS++Y++REGSKGHT+L+ GQV++RRIMDGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 1594 STHKHSLQAFSVYVHDDHTVKINPLICGPLGADFDGDCVHIFYPQSLAAKAEVVELFSVE 1415
            +THKHSLQA SVYVHDDHTVKINPLICGPL ADFDGDC+H+FYPQSLAAKAEV+ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 1414 KQMISSHSGSLNLQLVHDXXXXXXXXXXXXXXKKATAQQLSMHTSPLVQLPALVKAYPSG 1235
            KQ++SSH+G+LNLQL  D               KA AQQL+M     +  PAL KA+ SG
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSG 538

Query: 1234 PSWTYLQLLETVLPSVLDFSGERHLISQSEIMKIDFNRDLVQSIFTELITFIFDVKGPKE 1055
            P WT LQ+L++VLP   D  G+R+LI +SE++  DF+RD + S+  E++T IF  KGP+E
Sbjct: 539  PRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEE 598

Query: 1054 ALKVFNLLQPLLMEVLFQEGYSIGLNDFDIPKSVIHQLKQNVQDMSPLLYRLRCTYDEVV 875
             L+ F+ LQPLLME LF +G+S+ L DF + K+ +  +++ +Q +  LLY    T +E+V
Sbjct: 599  VLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELV 658

Query: 874  ELEIENHLKSLKLPLVAYILKSSSLGNLIDSKSDSAITKVVQQIGFLGLQLFDHGKFYSK 695
            +L+IENH++ +K+ +  +ILKSS+LG LIDSKSDSA++KVVQQ GFLGLQL D GKFYSK
Sbjct: 659  DLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSK 718

Query: 694  GLVEDMNLHFQSKCHTGGADCPSEAFGLIRSSFIEGLNPYEAFVHSISSREVLIRSSRGL 515
             LVED+  HF+ + +    + P+  +GLI+  F  GL+PYE   HSIS+REV++RSSRGL
Sbjct: 719  TLVEDIASHFE-RIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGL 777

Query: 514  TEPGVLFKNLMAILRDVVICYDGTIRHSCGSSIIQFEYGLKA 389
            +EPG LFKNLMA+LRDVVICYDGT+R+ C +SIIQF+Y + A
Sbjct: 778  SEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA 819



 Score =  142 bits (357), Expect(2) = 0.0
 Identities = 69/123 (56%), Positives = 93/123 (75%)
 Frame = -2

Query: 371  KAVLDSSQSNNSSWELMKEILLCKVNFKNDVNDRKVILYLNDCCCGKKYCKENAACLVQS 192
            KAVLDSS S+N+SWELMKEILLC+V+F ND  DR+VILYLNDC CG+KYC+E AA +V++
Sbjct: 846  KAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERAAYMVKN 905

Query: 191  HLQKARLKDFATDIAIEYQKQRTFPEISELDAGLVGHIHIDKKRLKESSLTVQEILQACQ 12
             L++  LKD A +  IEY+K    PEI   D GLVGHIH++K  L++  +++ +IL  CQ
Sbjct: 906  QLKRVSLKDAAVEFLIEYKK----PEIISDDEGLVGHIHLNKILLEDLRISMHDILPKCQ 961

Query: 11   DVI 3
            + +
Sbjct: 962  ETL 964