BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00012134
         (413 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010276684.1| PREDICTED: sigma factor binding protein 1, c...    72   1e-10
ref|XP_010245501.1| PREDICTED: sigma factor binding protein 1, c...    60   4e-07

>ref|XP_010276684.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 142

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
 Frame = -2

Query: 412 SVVQGLTGRDSDPTHMEKILGINGVDEPQRVPDQEIEGEDDKSDCARLVPGAVDHEGELS 233
           ++VQ LTGRDSD T  + +   +  D  QRVPDQ I+  ++       VP  VD   E  
Sbjct: 42  ALVQELTGRDSDLT--DTVARFSDTDSVQRVPDQPIKITNEG---VAEVP-RVDAYQESP 95

Query: 232 SVSADSSIEPFDDVFTAEMIENFTG-LPARSSLFFE-PQGDLFRSLDVV 92
           + S+DS +EPFDDVFT +M+ENF G LP    LF E PQ D FRSLD +
Sbjct: 96  AASSDSLLEPFDDVFTPQMLENFVGFLP--PCLFTEFPQVDFFRSLDAM 142


>ref|XP_010245501.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 145

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = -2

Query: 412 SVVQGLTGRDSDPTHMEKILGINGVDEPQRVPDQEIEGE-DDKSDCARLVPGAVDHEGEL 236
           ++VQ LTGRDSD T   +    + VD  Q VPDQ  +   DD  +  R     VD   E 
Sbjct: 42  ALVQELTGRDSDETDATRFSDFDSVDGVQVVPDQVAKVTYDDSPEIPR-----VDTYQES 96

Query: 235 SSVSADSSIEPFDDVFTAEMIENFTGLPARSSLFFEPQGDLFRSLDVVL 89
            + S  +  EPF+DVFT +M+E+F G    S      Q D+FR+ D V+
Sbjct: 97  PASSDSNLFEPFNDVFTPQMLESFAGFFPSSLTTESLQVDIFRNPDEVV 145