BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00012052
         (1079 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010267723.1| PREDICTED: mediator of RNA polymerase II tra...   270   1e-69
ref|XP_002273310.1| PREDICTED: mediator of RNA polymerase II tra...   264   7e-68
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   264   7e-68
ref|XP_007027217.1| Hydroxyproline-rich glycoprotein family prot...   263   1e-67
ref|XP_010100053.1| hypothetical protein L484_013165 [Morus nota...   260   1e-66
ref|XP_009598014.1| PREDICTED: mediator of RNA polymerase II tra...   259   3e-66
ref|XP_009762237.1| PREDICTED: mediator of RNA polymerase II tra...   258   5e-66
emb|CDP19144.1| unnamed protein product [Coffea canephora]            256   3e-65
ref|XP_010553019.1| PREDICTED: mediator of RNA polymerase II tra...   254   1e-64
ref|XP_010490754.1| PREDICTED: mediator of RNA polymerase II tra...   253   1e-64
emb|CDP21050.1| unnamed protein product [Coffea canephora]            253   2e-64
gb|AAP40461.1| unknown protein [Arabidopsis thaliana]                 253   2e-64
ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein...   253   2e-64
gb|KHG19994.1| Nucleolysin TIAR [Gossypium arboreum]                  252   4e-64
ref|XP_012470937.1| PREDICTED: mediator of RNA polymerase II tra...   251   5e-64
ref|XP_010452148.1| PREDICTED: mediator of RNA polymerase II tra...   251   5e-64
gb|KHN10595.1| Putative mediator of RNA polymerase II transcript...   251   6e-64
ref|XP_010316275.1| PREDICTED: mediator of RNA polymerase II tra...   251   6e-64
ref|XP_006338527.1| PREDICTED: mediator of RNA polymerase II tra...   251   6e-64
ref|XP_004232274.1| PREDICTED: mediator of RNA polymerase II tra...   251   6e-64

>ref|XP_010267723.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
            [Nelumbo nucifera] gi|720037602|ref|XP_010267724.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4 [Nelumbo nucifera]
            gi|720037605|ref|XP_010267726.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 4 [Nelumbo
            nucifera] gi|720037608|ref|XP_010267727.1| PREDICTED:
            mediator of RNA polymerase II transcription subunit 4
            [Nelumbo nucifera] gi|720037611|ref|XP_010267728.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4 [Nelumbo nucifera]
          Length = 427

 Score =  270 bits (690), Expect = 1e-69
 Identities = 155/258 (60%), Positives = 174/258 (67%), Gaps = 21/258 (8%)
 Frame = -2

Query: 1078 QTHTADSVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFT 899
            QT    S S+TKEILS FTSLQTQLFEAVA+LQEILDLQDAKQK++ DIR+ D  ILAF 
Sbjct: 120  QTPLDSSPSTTKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKISRDIRAKDAAILAFA 179

Query: 898  KKLKEAVQVLELLVDDYADYRQPKRLK---------------SGTTAPSTLNLSDILSYA 764
             KLKEA  VL++LVDDY+DY +PKR K               S TT  + LNLS+ILSYA
Sbjct: 180  NKLKEAEHVLDILVDDYSDYHRPKRSKPTTSEGNPENPPSYSSSTTITNPLNLSNILSYA 239

Query: 763  HRISYTTFAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXX 584
            HRISYTTFAPPEFGAG+APLRGALPPAPQ+EQMRASQLYNFADLDVGLP           
Sbjct: 240  HRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKTVETKEKTVV 299

Query: 583  TLIES----PITTENPLATMMQGMLVPP--PIPSGWRPGMPVELPTXXXXXXXXXXXXXX 422
            TLIE+    P+ T  P+       L+PP   IPSGWRPGMPVELP               
Sbjct: 300  TLIEAPSLKPVETNPPIDLAAIQGLIPPQLTIPSGWRPGMPVELPADLPVPPPGWKPGDP 359

Query: 421  XXXXPLEALVGPKKDEEQ 368
                PL+ALVGP K E+Q
Sbjct: 360  VTLPPLDALVGPNKGEDQ 377


>ref|XP_002273310.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
            [Vitis vinifera] gi|731398985|ref|XP_010653455.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4 [Vitis vinifera]
          Length = 414

 Score =  264 bits (675), Expect = 7e-68
 Identities = 151/247 (61%), Positives = 172/247 (69%), Gaps = 16/247 (6%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SSTKEILS FTSLQTQLFEAVA+LQEILDLQDAKQK+  +IRS D+ ILAF  KLKEA
Sbjct: 120  SPSSTKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEA 179

Query: 880  VQVLELLVDDYADYRQPKRLKSG----------TTAPSTLNLSDILSYAHRISYTTFAPP 731
              VL++LVDDY+DYR+PKR  +           TT  S LNLSDILSYAHRISYTTFAPP
Sbjct: 180  EAVLDILVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPP 239

Query: 730  EFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP---IT 560
            EFGAG+APLRGALPPAPQ+EQMRASQLYNF+DLDVGLP           T IE P     
Sbjct: 240  EFGAGQAPLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPA 299

Query: 559  TENPLATM--MQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVG 389
              NPLA +  +QG+L P   +PSGW+PGMPVELP+                  PLE++  
Sbjct: 300  DSNPLANLPSIQGLLPPNITVPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPI 359

Query: 388  PKKDEEQ 368
            P + EEQ
Sbjct: 360  PSRAEEQ 366


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  264 bits (675), Expect = 7e-68
 Identities = 151/247 (61%), Positives = 172/247 (69%), Gaps = 16/247 (6%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SSTKEILS FTSLQTQLFEAVA+LQEILDLQDAKQK+  +IRS D+ ILAF  KLKEA
Sbjct: 1154 SPSSTKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEA 1213

Query: 880  VQVLELLVDDYADYRQPKRLKSG----------TTAPSTLNLSDILSYAHRISYTTFAPP 731
              VL++LVDDY+DYR+PKR  +           TT  S LNLSDILSYAHRISYTTFAPP
Sbjct: 1214 EAVLDILVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPP 1273

Query: 730  EFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP---IT 560
            EFGAG+APLRGALPPAPQ+EQMRASQLYNF+DLDVGLP           T IE P     
Sbjct: 1274 EFGAGQAPLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPA 1333

Query: 559  TENPLATM--MQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVG 389
              NPLA +  +QG+L P   +PSGW+PGMPVELP+                  PLE++  
Sbjct: 1334 DSNPLANLPSIQGLLPPNITVPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPI 1393

Query: 388  PKKDEEQ 368
            P + EEQ
Sbjct: 1394 PSRAEEQ 1400


>ref|XP_007027217.1| Hydroxyproline-rich glycoprotein family protein [Theobroma cacao]
            gi|508715822|gb|EOY07719.1| Hydroxyproline-rich
            glycoprotein family protein [Theobroma cacao]
          Length = 417

 Score =  263 bits (673), Expect = 1e-67
 Identities = 150/245 (61%), Positives = 171/245 (69%), Gaps = 18/245 (7%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            +STKE+LS FTSLQTQLFEAVAQLQEILDLQD KQK+A +IRS D  ILAF  KLKEA +
Sbjct: 125  TSTKEVLSLFTSLQTQLFEAVAQLQEILDLQDFKQKIAREIRSNDGAILAFANKLKEAER 184

Query: 874  VLELLVDDYADYRQPKRLK------------SGTTAPSTLNLSDILSYAHRISYTTFAPP 731
            VL++LVDDY+DYR+PKRLK            S TT  S LNLSDILSYAHRISYTTFAPP
Sbjct: 185  VLDMLVDDYSDYRRPKRLKLEEDGGGGDDDSSTTTVASQLNLSDILSYAHRISYTTFAPP 244

Query: 730  EFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP---IT 560
            EFGAG+APLRGALPPAPQ+EQMRASQLY FADLDVGLP            +IE P     
Sbjct: 245  EFGAGQAPLRGALPPAPQEEQMRASQLYAFADLDVGLPKAVEAKEKAVEAIIEPPPAQPV 304

Query: 559  TENPLATM--MQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVG 389
              NPLA +  +QG+L P   +PSGW+PGMPVELPT                  PL++L  
Sbjct: 305  DTNPLANLAALQGLLPPNFTVPSGWKPGMPVELPTNLPVPPPGWKPGDPVPLPPLDSLPI 364

Query: 388  PKKDE 374
            P+ +E
Sbjct: 365  PRMEE 369


>ref|XP_010100053.1| hypothetical protein L484_013165 [Morus notabilis]
            gi|587892649|gb|EXB81224.1| hypothetical protein
            L484_013165 [Morus notabilis]
          Length = 416

 Score =  260 bits (665), Expect = 1e-66
 Identities = 149/250 (59%), Positives = 171/250 (68%), Gaps = 19/250 (7%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SSTKEILS FT+LQTQLFE+VAQLQEILDLQDAK KV  +IRS D+ +LAF  K+KEA
Sbjct: 128  SPSSTKEILSLFTALQTQLFESVAQLQEILDLQDAKNKVVREIRSKDSALLAFGHKVKEA 187

Query: 880  VQVLELLVDDYADYRQPKRLK-------------SGTTAPSTLNLSDILSYAHRISYTTF 740
             +VL++LVDDY+DYR PKR K             S TT  S LNLSDILSYAHRISYTTF
Sbjct: 188  ERVLDILVDDYSDYRHPKRSKLDDDAMDDDGGTSSSTTVASQLNLSDILSYAHRISYTTF 247

Query: 739  APPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPI- 563
            APPEFGAG+APLRGALPPAPQ+EQ+RASQLYNFA LDVGLP            +IE P  
Sbjct: 248  APPEFGAGQAPLRGALPPAPQEEQLRASQLYNFASLDVGLPKIVESDEKTVEPMIEPPAP 307

Query: 562  --TTENPLATM--MQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEA 398
              T  NPLA +  +QG+L P   +PSGW+PGMPVELPT                  PL +
Sbjct: 308  APTESNPLANLATIQGLLHPNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLAS 367

Query: 397  LVGPKKDEEQ 368
            L  P+  E+Q
Sbjct: 368  LPVPRVGEQQ 377


>ref|XP_009598014.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Nicotiana tomentosiformis]
          Length = 398

 Score =  259 bits (661), Expect = 3e-66
 Identities = 139/205 (67%), Positives = 158/205 (77%), Gaps = 8/205 (3%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SS+KEILS FTSLQTQLFEAVA+LQEILDLQD KQKV  +IRS D+ ILAF  KLKEA +
Sbjct: 120  SSSKEILSVFTSLQTQLFEAVAELQEILDLQDEKQKVIREIRSKDSSILAFANKLKEAER 179

Query: 874  VLELLVDDYADYRQPKRLK-------SGTTAPSTLNLSDILSYAHRISYTTFAPPEFGAG 716
            VL++LVDDY+DYR+PKR K       S  T  + L LSDILSYAHRISYTTFAPPEFG G
Sbjct: 180  VLDMLVDDYSDYRRPKRAKLENDTEESSVTVATQLKLSDILSYAHRISYTTFAPPEFGTG 239

Query: 715  EAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPITTENPLATM 536
            +APLRGALPPAPQDEQMRASQLYNF+DLDVGLP            L+E P  T NPLA  
Sbjct: 240  QAPLRGALPPAPQDEQMRASQLYNFSDLDVGLPKTDDDKETIIEPLLEPPAET-NPLAN- 297

Query: 535  MQGMLVPP-PIPSGWRPGMPVELPT 464
            +QG++ P   +P GW+PGMP+ELPT
Sbjct: 298  IQGLITPNIVVPFGWKPGMPIELPT 322


>ref|XP_009762237.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
            [Nicotiana sylvestris]
          Length = 399

 Score =  258 bits (659), Expect = 5e-66
 Identities = 142/206 (68%), Positives = 159/206 (77%), Gaps = 9/206 (4%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SS+KE LS FTSLQTQLFEAVA+LQEILDLQD KQKV  +IRS D+ ILAF  KLK A +
Sbjct: 120  SSSKETLSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAER 179

Query: 874  VLELLVDDYADYRQPKRLK--------SGTTAPSTLNLSDILSYAHRISYTTFAPPEFGA 719
            VL+ LVDDY+DYR+PKR+K        S TT  + L LSDILSYAHRISYTTFAPPEFGA
Sbjct: 180  VLDNLVDDYSDYRRPKRVKLENDIEESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGA 239

Query: 718  GEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPITTENPLAT 539
            G+APLRGALPPAPQDEQMRASQLYNFADLDVGLP            LIE  + T NPLA 
Sbjct: 240  GQAPLRGALPPAPQDEQMRASQLYNFADLDVGLPKLDEGKEKIIEPLIEPAVET-NPLAN 298

Query: 538  MMQGMLVPP-PIPSGWRPGMPVELPT 464
             +QG++ P   +PSGW+PGMPVELPT
Sbjct: 299  -IQGLITPNIVVPSGWKPGMPVELPT 323


>emb|CDP19144.1| unnamed protein product [Coffea canephora]
          Length = 364

 Score =  256 bits (653), Expect = 3e-65
 Identities = 141/211 (66%), Positives = 160/211 (75%), Gaps = 14/211 (6%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SS+KEIL+ FT+LQTQLFEAVA+LQEILDLQD KQK++H+IRS D  ILA   KLKEA Q
Sbjct: 77   SSSKEILALFTNLQTQLFEAVAELQEILDLQDGKQKLSHEIRSKDAAILALASKLKEAEQ 136

Query: 874  VLELLVDDYADYRQPKRLKSG--------TTAPSTLNLSDILSYAHRISYTTFAPPEFGA 719
            VL+ LVDDY+DYR+ KR KS         TT  S L LSDILSYAHRISYTTFAPPEFGA
Sbjct: 137  VLDNLVDDYSDYRRSKRSKSEDVAEDSSTTTVASQLKLSDILSYAHRISYTTFAPPEFGA 196

Query: 718  GEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPI---TTENP 548
            G+APLRGALPPAPQ+EQMRASQLY FADLDVGLP            LIE+P+      NP
Sbjct: 197  GQAPLRGALPPAPQEEQMRASQLYAFADLDVGLPKTDEHKKKIIEPLIETPVGQPAEPNP 256

Query: 547  LATM--MQGMLVPP-PIPSGWRPGMPVELPT 464
            LA +  MQG+L P   +PSGW+PGMPVELP+
Sbjct: 257  LANLAGMQGLLPPNIAVPSGWKPGMPVELPS 287


>ref|XP_010553019.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Tarenaya hassleriana]
          Length = 426

 Score =  254 bits (648), Expect = 1e-64
 Identities = 141/247 (57%), Positives = 166/247 (67%), Gaps = 18/247 (7%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SSTKEILS F SLQTQLFEAV +LQEILDLQDAKQKVA +I+S D  +LAF  KLKEA +
Sbjct: 134  SSTKEILSLFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDASLLAFANKLKEAER 193

Query: 874  VLELLVDDYADYRQPKRLKSG-----------------TTAPSTLNLSDILSYAHRISYT 746
            VL++LVDDY+DYR+PK+ ++G                 TT  S L L DILSYAHRISYT
Sbjct: 194  VLDMLVDDYSDYRRPKQARTGDESREEEDDDESSSSVNTTVASQLKLKDILSYAHRISYT 253

Query: 745  TFAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP 566
            TFAPPEFGAG+APLRGALPPAPQDEQMRASQLYNFADLDVG+P            L+E P
Sbjct: 254  TFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFADLDVGIPKSTESDEKKVEALMEPP 313

Query: 565  ITTENPLATMMQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVG 389
              +     + +QG+L P   +PSGW+PGMPVELP                   PLE++  
Sbjct: 314  RPSGPVDISAIQGLLPPNIAVPSGWKPGMPVELPKDLPMPPPGWKPGDPVVLPPLESIPA 373

Query: 388  PKKDEEQ 368
             + DE+Q
Sbjct: 374  ARGDEQQ 380


>ref|XP_010490754.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
            [Camelina sativa]
          Length = 424

 Score =  253 bits (647), Expect = 1e-64
 Identities = 138/240 (57%), Positives = 165/240 (68%), Gaps = 11/240 (4%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SSTKEILS F SLQTQLFEAV +LQEILDLQDAKQKVA +I+S D+ +LAF  KLK+A +
Sbjct: 141  SSTKEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAER 200

Query: 874  VLELLVDDYADYRQPKRLKS----------GTTAPSTLNLSDILSYAHRISYTTFAPPEF 725
            VL++LVDDY+DYR+PKR K+           TT  S L L DIL+YAH+ISYTTFAPPEF
Sbjct: 201  VLDMLVDDYSDYRKPKRSKTLTDDEEEEDASTTVSSQLKLKDILAYAHKISYTTFAPPEF 260

Query: 724  GAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPITTENPL 545
            GAG+APLRGALPPAPQDEQMRASQLY FADLD+GLP           TLIE P   E   
Sbjct: 261  GAGQAPLRGALPPAPQDEQMRASQLYTFADLDIGLPKTVENLEKKVDTLIEPPPPPEAMD 320

Query: 544  ATMMQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVGPKKDEEQ 368
             + +  +L P   +PSGW+PGMPVELP                   PLE++  P+ +++Q
Sbjct: 321  ISAIHNLLPPNIAVPSGWKPGMPVELPRDLLLPPPGWKPGDPVVIPPLESITAPRAEDQQ 380


>emb|CDP21050.1| unnamed protein product [Coffea canephora]
          Length = 410

 Score =  253 bits (646), Expect = 2e-64
 Identities = 140/211 (66%), Positives = 160/211 (75%), Gaps = 14/211 (6%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SS+KEIL+ FT+LQTQLFEAVA+LQEILDLQD KQK++H+IRS D  ILA   KLKEA Q
Sbjct: 123  SSSKEILALFTNLQTQLFEAVAELQEILDLQDGKQKLSHEIRSKDAAILALASKLKEAEQ 182

Query: 874  VLELLVDDYADYRQPKRLKSG--------TTAPSTLNLSDILSYAHRISYTTFAPPEFGA 719
            VL+ LVDDY+DYR+ KR KS         TT  S L LSDILSYAHRISYTTFAPPEFGA
Sbjct: 183  VLDNLVDDYSDYRRSKRSKSEDVAEDSSTTTVASQLKLSDILSYAHRISYTTFAPPEFGA 242

Query: 718  GEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPI---TTENP 548
            G+APLRGALPPAPQ+EQMRASQLY FADL+VGLP            +IE+P+      NP
Sbjct: 243  GQAPLRGALPPAPQEEQMRASQLYAFADLNVGLPKTDEDKKKTIEPMIETPVGQPAEPNP 302

Query: 547  LA--TMMQGMLVPP-PIPSGWRPGMPVELPT 464
            LA  T MQG+L P   +PSGW+PGMPVELP+
Sbjct: 303  LANLTGMQGLLPPNISVPSGWKPGMPVELPS 333


>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
          Length = 426

 Score =  253 bits (646), Expect = 2e-64
 Identities = 139/246 (56%), Positives = 164/246 (66%), Gaps = 15/246 (6%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SSTKEILS F SLQTQLFEAV +LQEILDLQDAKQKVA +I+S D+ +LAF  KLK+A
Sbjct: 137  SPSSTKEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDA 196

Query: 880  VQVLELLVDDYADYRQPKRLK--------------SGTTAPSTLNLSDILSYAHRISYTT 743
             +VL++LVDDY+DYR+PKR K              S TT  S L L DIL+YAH+ISYTT
Sbjct: 197  ERVLDMLVDDYSDYRKPKRSKIEEDDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTT 256

Query: 742  FAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPI 563
            FAPPEFGAG+APLRGALPPAPQDEQMRASQLY FADLD+GLP            LIE P 
Sbjct: 257  FAPPEFGAGQAPLRGALPPAPQDEQMRASQLYTFADLDIGLPKTVENMEKKVEALIEPPP 316

Query: 562  TTENPLATMMQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVGP 386
              E    + +  +L P   +PSGW+PGMPVELP                   PLE++  P
Sbjct: 317  PPEAMDISAIHNLLPPNIAVPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAP 376

Query: 385  KKDEEQ 368
            + ++ Q
Sbjct: 377  RAEDHQ 382


>ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
            thaliana] gi|75181168|sp|Q9LZ00.1|MED4_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            4 gi|7413560|emb|CAB86039.1| putative protein
            [Arabidopsis thaliana] gi|332003144|gb|AED90527.1|
            hydroxyproline-rich glycoprotein family protein
            [Arabidopsis thaliana]
          Length = 426

 Score =  253 bits (646), Expect = 2e-64
 Identities = 139/246 (56%), Positives = 164/246 (66%), Gaps = 15/246 (6%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SSTKEILS F SLQTQLFEAV +LQEILDLQDAKQKVA +I+S D+ +LAF  KLK+A
Sbjct: 137  SPSSTKEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDA 196

Query: 880  VQVLELLVDDYADYRQPKRLK--------------SGTTAPSTLNLSDILSYAHRISYTT 743
             +VL++LVDDY+DYR+PKR K              S TT  S L L DIL+YAH+ISYTT
Sbjct: 197  ERVLDMLVDDYSDYRKPKRSKIEEDDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTT 256

Query: 742  FAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPI 563
            FAPPEFGAG+APLRGALPPAPQDEQMRASQLY FADLD+GLP            LIE P 
Sbjct: 257  FAPPEFGAGQAPLRGALPPAPQDEQMRASQLYTFADLDIGLPKTVENMEKKVEALIEPPP 316

Query: 562  TTENPLATMMQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALVGP 386
              E    + +  +L P   +PSGW+PGMPVELP                   PLE++  P
Sbjct: 317  PPEAMDISAIHNLLPPNIAVPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAP 376

Query: 385  KKDEEQ 368
            + ++ Q
Sbjct: 377  RAEDHQ 382


>gb|KHG19994.1| Nucleolysin TIAR [Gossypium arboreum]
          Length = 491

 Score =  252 bits (643), Expect = 4e-64
 Identities = 138/218 (63%), Positives = 157/218 (72%), Gaps = 22/218 (10%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            +STKE++S F SLQTQLFEAV QLQEILDLQDAKQK+A +IR  D  +LAF  KLKEA Q
Sbjct: 195  TSTKEVISLFASLQTQLFEAVGQLQEILDLQDAKQKIAREIRFKDGAVLAFANKLKEAEQ 254

Query: 874  VLELLVDDYADYRQPKRLK----------------SGTTAPSTLNLSDILSYAHRISYTT 743
            VL++LVDDY+ YR+PKRLK                  TT  S LNLSDILSYAHRISYTT
Sbjct: 255  VLDVLVDDYSSYRKPKRLKLEDNGVKDAAAADGDSCTTTVASRLNLSDILSYAHRISYTT 314

Query: 742  FAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP- 566
            FAPPEFGAG+APLRGALPPAPQ+EQMRASQLYNFADLDVGLP            +IE P 
Sbjct: 315  FAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKTAETREKTVEAIIEPPP 374

Query: 565  --ITTENPLATM--MQGMLVPP-PIPSGWRPGMPVELP 467
                  NPLA +  +QG+L P   +P+GW+P MPVELP
Sbjct: 375  AQPADTNPLANLAALQGLLPPNFTVPAGWKPNMPVELP 412


>ref|XP_012470937.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
            [Gossypium raimondii] gi|823142272|ref|XP_012470938.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4 [Gossypium raimondii]
            gi|763752147|gb|KJB19535.1| hypothetical protein
            B456_003G108400 [Gossypium raimondii]
            gi|763752148|gb|KJB19536.1| hypothetical protein
            B456_003G108400 [Gossypium raimondii]
            gi|763752149|gb|KJB19537.1| hypothetical protein
            B456_003G108400 [Gossypium raimondii]
          Length = 491

 Score =  251 bits (642), Expect = 5e-64
 Identities = 138/218 (63%), Positives = 157/218 (72%), Gaps = 22/218 (10%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            +STKE++S F SLQTQLFEAV QLQEILDLQDAKQK+A +IR  D  +LAF  KLKEA Q
Sbjct: 195  TSTKEVISLFASLQTQLFEAVGQLQEILDLQDAKQKIAREIRFKDGAVLAFANKLKEAEQ 254

Query: 874  VLELLVDDYADYRQPKRLK----------------SGTTAPSTLNLSDILSYAHRISYTT 743
            VL++LVDDY+ YR+PKRLK                  TT  S LNLSDILSYAHRISYTT
Sbjct: 255  VLDVLVDDYSSYRKPKRLKLEDNGVKDAAAADGDSCTTTVVSRLNLSDILSYAHRISYTT 314

Query: 742  FAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP- 566
            FAPPEFGAG+APLRGALPPAPQ+EQMRASQLYNFADLDVGLP            +IE P 
Sbjct: 315  FAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKTAETKEKTVEAIIEPPP 374

Query: 565  --ITTENPLATM--MQGMLVPP-PIPSGWRPGMPVELP 467
                  NPLA +  +QG+L P   +P+GW+P MPVELP
Sbjct: 375  AQPADTNPLANLAALQGLLPPNFTVPAGWKPNMPVELP 412


>ref|XP_010452148.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Camelina sativa]
          Length = 432

 Score =  251 bits (642), Expect = 5e-64
 Identities = 138/248 (55%), Positives = 164/248 (66%), Gaps = 19/248 (7%)
 Frame = -2

Query: 1054 SSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEAVQ 875
            SSTKEILS F SLQTQLFEAV +LQEILDLQDAKQKVA +I+S D+ +LAF  KLK+A +
Sbjct: 141  SSTKEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAER 200

Query: 874  VLELLVDDYADYRQPKRLK------------------SGTTAPSTLNLSDILSYAHRISY 749
            VL++LVDDY+DYR+PKR K                  S TT  S L L DIL+YAH+ISY
Sbjct: 201  VLDMLVDDYSDYRKPKRSKTLTESEKEEEEDDDNVTSSSTTVSSQLKLKDILAYAHKISY 260

Query: 748  TTFAPPEFGAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIES 569
            TTFAPPEFGAG+APLRGALPPAPQDEQMRASQLY FADLD+GLP            LIE 
Sbjct: 261  TTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYTFADLDIGLPKNVENMEKKVEALIEP 320

Query: 568  PITTENPLATMMQGMLVPP-PIPSGWRPGMPVELPTXXXXXXXXXXXXXXXXXXPLEALV 392
            P   E    + +  +L P   +PSGW+PGMPVELP                   PLE++ 
Sbjct: 321  PPPPEAMDISAIHNLLPPNIAVPSGWKPGMPVELPRDLLLPPPGWKPGDRVVLPPLESIA 380

Query: 391  GPKKDEEQ 368
             P+ +++Q
Sbjct: 381  APRAEDQQ 388


>gb|KHN10595.1| Putative mediator of RNA polymerase II transcription subunit 4
            [Glycine soja]
          Length = 388

 Score =  251 bits (641), Expect = 6e-64
 Identities = 134/208 (64%), Positives = 155/208 (74%), Gaps = 10/208 (4%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S S+ KEI+S FT LQTQ+FEAVA+LQEILDLQDAKQK+  +IRS D+ +LAF  KLKEA
Sbjct: 108  SPSNAKEIISLFTVLQTQIFEAVAELQEILDLQDAKQKIDREIRSQDSTLLAFANKLKEA 167

Query: 880  VQVLELLVDDYADYRQPKRLKSG-------TTAPSTLNLSDILSYAHRISYTTFAPPEFG 722
               L++LVDDY+DYR+ KR KSG       +T  S L LSDILSYAHRISYTTFAPPEFG
Sbjct: 168  ESCLDILVDDYSDYRRSKRSKSGVDDSMTSSTVSSQLKLSDILSYAHRISYTTFAPPEFG 227

Query: 721  AGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESP---ITTEN 551
            AG+APLRGALPPAPQ+EQMRASQLYNFADLDVGLP            ++E P    T   
Sbjct: 228  AGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQVDTNAV 287

Query: 550  PLATMMQGMLVPPPIPSGWRPGMPVELP 467
            P  +  QGML  PP+P GW+PGMPV+LP
Sbjct: 288  PNLSAFQGML--PPMPPGWKPGMPVQLP 313


>ref|XP_010316275.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            isoform X1 [Solanum lycopersicum]
            gi|723671629|ref|XP_010316276.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 4-like isoform X1
            [Solanum lycopersicum] gi|723671640|ref|XP_010316277.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 4-like isoform X1 [Solanum lycopersicum]
          Length = 398

 Score =  251 bits (641), Expect = 6e-64
 Identities = 143/211 (67%), Positives = 158/211 (74%), Gaps = 12/211 (5%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SS+KEILS+FTSLQTQLFEAVA+LQEILDLQD KQKV  +IR  D+ ILAF  KLK A
Sbjct: 115  SPSSSKEILSAFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRLNDSAILAFANKLKGA 174

Query: 880  VQVLELLVDDYADYRQPKRLK--------SGTTAPSTLNLSDILSYAHRISYTTFAPPEF 725
              VL+ LVDDYADYR+PKR K        S T+  + L LSD+LSYAHRISYTTFAPPEF
Sbjct: 175  EHVLDNLVDDYADYRRPKRAKLENDTEESSLTSVATQLKLSDVLSYAHRISYTTFAPPEF 234

Query: 724  GAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPITTENPL 545
            G G+APLRGALPPAPQDEQ+RASQLY FADLDVGLP            LIE P    NPL
Sbjct: 235  GGGQAPLRGALPPAPQDEQLRASQLYIFADLDVGLPKTDEGKENILEPLIEPP-AESNPL 293

Query: 544  A--TMMQGMLVPPPI--PSGWRPGMPVELPT 464
            A  + +QG LVPP I  PSGW+PGMPVELPT
Sbjct: 294  AYLSSIQG-LVPPNIVVPSGWKPGMPVELPT 323


>ref|XP_006338527.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            [Solanum tuberosum]
          Length = 398

 Score =  251 bits (641), Expect = 6e-64
 Identities = 144/211 (68%), Positives = 158/211 (74%), Gaps = 12/211 (5%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SS+KEILS FTSLQTQLFEAVA+LQEILDLQD KQKV  +IRS D+ ILAF  KLK A
Sbjct: 115  SPSSSKEILSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGA 174

Query: 880  VQVLELLVDDYADYRQPKRLK--------SGTTAPSTLNLSDILSYAHRISYTTFAPPEF 725
             +VL+ LVDDYADYR+PKR K        S T+  + L LSDILSYAHRISYTTFAPPEF
Sbjct: 175  ERVLDNLVDDYADYRRPKRAKLENDTEESSVTSVATQLKLSDILSYAHRISYTTFAPPEF 234

Query: 724  GAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPITTENPL 545
            G G+APLRGALPPAPQDEQ+RASQLY FADLDVGLP            LIE P    N L
Sbjct: 235  GGGQAPLRGALPPAPQDEQLRASQLYIFADLDVGLPKTDEGKENILEPLIEPP-AESNAL 293

Query: 544  ATM--MQGMLVPPPI--PSGWRPGMPVELPT 464
            A +  +QG LVPP I  PSGW+PGMPVELPT
Sbjct: 294  ANLSSIQG-LVPPNIVVPSGWKPGMPVELPT 323


>ref|XP_004232274.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
            isoform X2 [Solanum lycopersicum]
          Length = 324

 Score =  251 bits (641), Expect = 6e-64
 Identities = 143/211 (67%), Positives = 158/211 (74%), Gaps = 12/211 (5%)
 Frame = -2

Query: 1060 SVSSTKEILSSFTSLQTQLFEAVAQLQEILDLQDAKQKVAHDIRSMDNYILAFTKKLKEA 881
            S SS+KEILS+FTSLQTQLFEAVA+LQEILDLQD KQKV  +IR  D+ ILAF  KLK A
Sbjct: 41   SPSSSKEILSAFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRLNDSAILAFANKLKGA 100

Query: 880  VQVLELLVDDYADYRQPKRLK--------SGTTAPSTLNLSDILSYAHRISYTTFAPPEF 725
              VL+ LVDDYADYR+PKR K        S T+  + L LSD+LSYAHRISYTTFAPPEF
Sbjct: 101  EHVLDNLVDDYADYRRPKRAKLENDTEESSLTSVATQLKLSDVLSYAHRISYTTFAPPEF 160

Query: 724  GAGEAPLRGALPPAPQDEQMRASQLYNFADLDVGLPXXXXXXXXXXXTLIESPITTENPL 545
            G G+APLRGALPPAPQDEQ+RASQLY FADLDVGLP            LIE P    NPL
Sbjct: 161  GGGQAPLRGALPPAPQDEQLRASQLYIFADLDVGLPKTDEGKENILEPLIEPP-AESNPL 219

Query: 544  A--TMMQGMLVPPPI--PSGWRPGMPVELPT 464
            A  + +QG LVPP I  PSGW+PGMPVELPT
Sbjct: 220  AYLSSIQG-LVPPNIVVPSGWKPGMPVELPT 249