BLASTX nr result
ID: Cinnamomum24_contig00011940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00011940
(522 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010246108.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
ref|XP_011020996.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi... 72 2e-10
ref|XP_002319950.1| hypothetical protein POPTR_0013s14820g [Popu... 71 2e-10
gb|KEH21904.1| editing factor 22 [Medicago truncatula] 69 9e-10
ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phas... 69 9e-10
ref|XP_003621820.1| Pentatricopeptide repeat-containing protein,... 69 9e-10
gb|KHN27212.1| Pentatricopeptide repeat-containing protein [Glyc... 69 1e-09
ref|XP_011100283.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_010542851.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c... 67 5e-09
ref|XP_012568887.1| PREDICTED: pentatricopeptide repeat-containi... 67 5e-09
ref|XP_012852438.1| PREDICTED: pentatricopeptide repeat-containi... 67 6e-09
emb|CDP11859.1| unnamed protein product [Coffea canephora] 66 8e-09
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th... 66 1e-08
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana] 66 1e-08
ref|XP_009353362.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp.... 65 2e-08
ref|XP_008379591.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 64 4e-08
>ref|XP_010246108.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Nelumbo nucifera]
Length = 738
Score = 94.4 bits (233), Expect = 3e-17
Identities = 55/117 (47%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = -1
Query: 351 LSSTILQSRPLDLVPGLEFPAPTFKFLIIHXXXXXXXXXXPLLDFHEEDD-ANPVDLDIF 175
+S LQ+ L V E A TFKFL + LD+ +E++ + + D F
Sbjct: 15 MSPAKLQALALATVVPFELVASTFKFLKEYCSLMMP------LDYPDENNNLSSISSDSF 68
Query: 174 YTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
Y L D+ TH+KHL QIH LI +G SNYL TKFVH SSN GEIHYAR LF+EIP
Sbjct: 69 YAFLLDNLTHKKHLVQIHAQLIVAGFQNSNYLATKFVHASSNAGEIHYARSLFEEIP 125
>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
protein product [Vitis vinifera]
Length = 742
Score = 85.5 bits (210), Expect = 1e-14
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = -1
Query: 327 RPLDL--VPGLEFPAPTFKFLIIHXXXXXXXXXXPLLDFHEEDDANPVDLDIFYTSLFDD 154
RPL L EFPA FKFL + LD + + D D F++SL D
Sbjct: 27 RPLGLPTATASEFPATLFKFLNFYSSLPLP------LDHSDYIPYSGFDFDSFFSSLLDH 80
Query: 153 CTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
H++HL QIH L+ SG +ES +LVTKFV+ S N+GEI YAR++FDE P
Sbjct: 81 SVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFP 130
>ref|XP_011020996.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Populus euphratica]
Length = 746
Score = 72.0 bits (175), Expect = 1e-10
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = -1
Query: 327 RPLDLVPGLEFPAPTFKFLIIHXXXXXXXXXXPLLDFHEEDDANPVDL--DIFYTSLFDD 154
RPLD P FPA T KFL H +++DD+N D FY SL DD
Sbjct: 29 RPLD-PPRFRFPASTLKFLETHYSSSLNLTTHFN---NKKDDSNENSFKPDKFYASLIDD 84
Query: 153 CTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
H+ HL QI+ L+ +G +L+ K V+ +SN+GE+ AR+LFD+ P
Sbjct: 85 SIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP 134
>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1
Query: 183 DIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
D FY SL D+ TH++HL QIH L+ SG + +L+TK V+ SSNLG+I YAR+LFDE
Sbjct: 56 DSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC 115
Query: 3 Y 1
Y
Sbjct: 116 Y 116
>ref|XP_002319950.1| hypothetical protein POPTR_0013s14820g [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| hypothetical protein
POPTR_0013s14820g [Populus trichocarpa]
Length = 746
Score = 71.2 bits (173), Expect = 2e-10
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = -1
Query: 327 RPLDLVPGLEFPAPTFKFLIIHXXXXXXXXXXPLLDFHEEDDANPVDL--DIFYTSLFDD 154
RPLD P FPA T KFL H + +DD N D FY SL DD
Sbjct: 29 RPLD-PPPFRFPASTLKFLETHYSSSLNLTTHFN---NNKDDCNESTFKPDKFYASLIDD 84
Query: 153 CTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
H+ HL QI+ L+ +G +L+ K V+ +SN+GE+ AR+LFD+ P
Sbjct: 85 SIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP 134
>gb|KEH21904.1| editing factor 22 [Medicago truncatula]
Length = 719
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -1
Query: 177 FYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
FY SL D+ TH HL Q+H L+ SG + +L+TK V+ SSNLG+I YAR+LFDE P
Sbjct: 49 FYASLIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFP 106
>ref|XP_007139254.1| hypothetical protein PHAVU_008G014200g [Phaseolus vulgaris]
gi|593331658|ref|XP_007139255.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
gi|561012387|gb|ESW11248.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
gi|561012388|gb|ESW11249.1| hypothetical protein
PHAVU_008G014200g [Phaseolus vulgaris]
Length = 727
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = -1
Query: 219 FHEEDDAN---PVDLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSN 49
FH + N V+ D FY SL D+ TH++HL QIH L+ SG + +L+TK V+ SSN
Sbjct: 41 FHPQHSVNHDRSVNSDSFYASLIDNSTHKRHLDQIHNQLVVSGLQHNGFLMTKLVNGSSN 100
Query: 48 LGEIHYARQLFD 13
L +I YAR+LFD
Sbjct: 101 LAQICYARKLFD 112
>ref|XP_003621820.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 114
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -1
Query: 177 FYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
FY SL D+ TH HL Q+H L+ SG + +L+TK V+ SSNLG+I YAR+LFDE P
Sbjct: 49 FYASLIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFP 106
>gb|KHN27212.1| Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 433
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = -1
Query: 183 DIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
D FY SL D+ TH++H QIH L+ SG + +L+TK V+ SSNLG+I YAR+LFDE
Sbjct: 31 DSFYASLIDNSTHKRHRDQIHNQLVISGLQHNGFLMTKVVNGSSNLGQICYARKLFDEFC 90
Query: 3 Y 1
Y
Sbjct: 91 Y 91
>ref|XP_011100283.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Sesamum indicum]
Length = 715
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = -1
Query: 192 VDLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFD 13
+ + FYTSL + TH HL QIH L G + ++VTK +H +SNL EIHYAR LF+
Sbjct: 41 ISAESFYTSLLEKSTHIIHLRQIHCQLYTHGLQNNGFIVTKLIHVTSNLKEIHYARHLFE 100
Query: 12 EIP 4
E P
Sbjct: 101 EFP 103
>ref|XP_010542851.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
isoform X1 [Tarenaya hassleriana]
Length = 694
Score = 67.0 bits (162), Expect = 5e-09
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -1
Query: 204 DANPVDLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYAR 25
D + D FY SL D T + HL Q+H L+ G S +L+TK +H SS LG++ YAR
Sbjct: 16 DKRGIHSDSFYASLIDSSTRKGHLRQVHARLLLLGFQFSGFLITKLIHASSELGDMCYAR 75
Query: 24 QLFDEIPY 1
Q+FD+ P+
Sbjct: 76 QVFDDFPH 83
>ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao]
gi|508712276|gb|EOY04173.1| Mitochondrial editing factor
22 [Theobroma cacao]
Length = 735
Score = 67.0 bits (162), Expect = 5e-09
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = -1
Query: 312 VPGLEFPAPTFKFLIIHXXXXXXXXXXPLLDFHEEDDA---NPVDLDIFYTSLFDDCTHQ 142
V EFPA F FL F D++ + + D FY +L D T
Sbjct: 33 VKAFEFPATPFNFL---------------KPFSSHDNSTIFHTFNFDSFYANLLDSSTRN 77
Query: 141 KHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
HLTQIH L+ ++ +L+TK ++++ NLGEI YAR++FDE P
Sbjct: 78 AHLTQIHAKLVLLDIHQNGFLITKLINSAVNLGEISYARKVFDEFP 123
>ref|XP_012568887.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Cicer arietinum] gi|828297705|ref|XP_012568888.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g12770 [Cicer arietinum]
gi|828297708|ref|XP_012568889.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g12770
[Cicer arietinum] gi|828297710|ref|XP_012568890.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g12770 [Cicer arietinum]
Length = 724
Score = 67.0 bits (162), Expect = 5e-09
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = -1
Query: 177 FYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
FY SL D+ TH +HL QIH LI SG +++TK V SSNLG I YAR+LFD+ P
Sbjct: 55 FYASLIDNSTHIRHLNQIHNQLIVSGLQHDRFVMTKLVTESSNLGHIFYARKLFDKFP 112
>ref|XP_012852438.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Erythranthe guttatus]
Length = 710
Score = 66.6 bits (161), Expect = 6e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -1
Query: 189 DLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDE 10
D + F+TSL + H HL QIH L G E+ +++TKF++TSSNL EI YAR +FDE
Sbjct: 37 DDESFFTSLLEKSAHTAHLNQIHNQLYIHGLHENGFIITKFINTSSNLREIDYARHVFDE 96
Query: 9 IP 4
P
Sbjct: 97 FP 98
>emb|CDP11859.1| unnamed protein product [Coffea canephora]
Length = 747
Score = 66.2 bits (160), Expect = 8e-09
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Frame = -1
Query: 390 SHRFLLGTPSSHLLS-STILQSRPLDLVPG----LEFPAPTFKFLIIHXXXXXXXXXXPL 226
S L P+ LS S+ L S L P EFPA F + +
Sbjct: 4 SQSLLRAIPTCSFLSLSSSLPSTLQRLYPSPFKLFEFPASKFSCIGYYYSSLPLP----- 58
Query: 225 LDFHEEDDAN---PVDLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTS 55
LD + +++ N + + +YTSL TH+ L QIH L G + Y++TKF+H
Sbjct: 59 LDHNFDNNNNLYYTFEPEAYYTSLLSKSTHKSFLNQIHAQLFTFGLQNNGYIITKFIHVG 118
Query: 54 SNLGEIHYARQLFDEI--PY 1
SN+GEI YAR++FDE PY
Sbjct: 119 SNIGEIIYARKIFDEFSDPY 138
>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor
22 [Arabidopsis thaliana]
Length = 694
Score = 65.9 bits (159), Expect = 1e-08
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -1
Query: 183 DIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
D FY SL D TH+ L QIH L+ G S +L+TK +H SS+ G+I +ARQ+FD++P
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 65.9 bits (159), Expect = 1e-08
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -1
Query: 183 DIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
D FY SL D TH+ L QIH L+ G S +L+TK +H SS+ G+I +ARQ+FD++P
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
>ref|XP_009353362.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Pyrus x bretschneideri]
Length = 753
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = -1
Query: 189 DLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDE 10
D D F+ SL D T + L QIH L+ G ++S +L+TK V+ SSNLG I YARQ+FDE
Sbjct: 80 DPDSFFASLIDSSTRESQLGQIHAQLVVLGLIDSGFLITKLVNASSNLGYIWYARQVFDE 139
>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -1
Query: 183 DIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDEIP 4
D FY SL D TH+ L QIH L+ G S +L+TK +H SS+ G+I +ARQ+FD++P
Sbjct: 21 DSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLP 80
>ref|XP_008379591.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g12770-like [Malus domestica]
Length = 758
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = -1
Query: 189 DLDIFYTSLFDDCTHQKHLTQIHPHLIKSGSLESNYLVTKFVHTSSNLGEIHYARQLFDE 10
D D F+ SL D T + L QIH L+ G ++S +L+TK V+ SSNLG I YARQ+FDE
Sbjct: 65 DPDSFFGSLIDGSTRKSQLGQIHAQLVVLGLIDSGFLITKLVNASSNLGYISYARQVFDE 124