BLASTX nr result

ID: Cinnamomum24_contig00010389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00010389
         (770 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    80   1e-12

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
 Frame = +3

Query: 63  SMISSRTKHESFDSFGSHTQLLNGSFHLF--*CNEPTLSSLFVFQ-DIKTDTRPEYSEDS 233
           S+I SRTKHESFDSFGSH QLL  + H+F   CNEP  SSLF+FQ DI+T+  P+YSEDS
Sbjct: 13  SIIPSRTKHESFDSFGSHAQLLKVNSHIFFYECNEPIFSSLFIFQKDIETNVIPKYSEDS 72

Query: 234 SD 239
           SD
Sbjct: 73  SD 74


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