BLASTX nr result

ID: Cinnamomum24_contig00010266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00010266
         (400 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283542.1| PREDICTED: E3 ubiquitin-protein ligase Arkad...    57   4e-06
emb|CAN78695.1| hypothetical protein VITISV_037476 [Vitis vinifera]    57   4e-06
ref|XP_010251906.1| PREDICTED: uncharacterized protein LOC104593...    56   8e-06

>ref|XP_002283542.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Vitis vinifera]
           gi|297741707|emb|CBI32839.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/58 (53%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -3

Query: 173 MGKIEEEQSL-STSAAAEISEQGVGNRCRIRGFVGIRCXXXXXXXXXXXXXAIFWLPP 3
           MGK+EEEQ L S    +E S+Q VG+RCRIRG VG RC             AIFWLPP
Sbjct: 1   MGKVEEEQPLPSAIVVSEPSDQNVGSRCRIRGRVGFRCVLALLLGAAVMLSAIFWLPP 58


>emb|CAN78695.1| hypothetical protein VITISV_037476 [Vitis vinifera]
          Length = 514

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/58 (53%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -3

Query: 173 MGKIEEEQSL-STSAAAEISEQGVGNRCRIRGFVGIRCXXXXXXXXXXXXXAIFWLPP 3
           MGK+EEEQ L S    +E S+Q VG+RCRIRG VG RC             AIFWLPP
Sbjct: 1   MGKVEEEQPLPSAIVVSEPSDQNVGSRCRIRGRVGFRCVLALLLGAAVMLSAIFWLPP 58


>ref|XP_010251906.1| PREDICTED: uncharacterized protein LOC104593643 [Nelumbo nucifera]
          Length = 489

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/57 (42%), Positives = 34/57 (59%)
 Frame = -3

Query: 173 MGKIEEEQSLSTSAAAEISEQGVGNRCRIRGFVGIRCXXXXXXXXXXXXXAIFWLPP 3
           MGK+EEEQ+L ++    I E+ VG+RC I+ +VG+RC              +FWLPP
Sbjct: 1   MGKVEEEQALHSTVVEGIPEENVGSRCEIKKYVGLRCVVVVLFSIAVLLSGVFWLPP 57


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