BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00010114
         (2282 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   639   e-180
ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein...   634   e-178
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   631   e-178
ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein...   630   e-177
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   625   e-176
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   625   e-176
ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein...   622   e-175
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   619   e-174
gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glyc...   616   e-173
ref|XP_004505022.1| PREDICTED: protein RTF1 homolog [Cicer ariet...   616   e-173
gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glyc...   616   e-173
gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glyc...   616   e-173
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   615   e-173
ref|XP_011027887.1| PREDICTED: RNA polymerase-associated protein...   615   e-173
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   615   e-173
gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sin...   615   e-173
ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein...   607   e-170
ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein...   597   e-167
gb|KEH31113.1| RNA polymerase-associated RTF1-like protein [Medi...   596   e-167
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   595   e-167

>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  639 bits (1647), Expect = e-180
 Identities = 370/667 (55%), Positives = 436/667 (65%), Gaps = 5/667 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTG-SGRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG SGR +++ P S+R+RE                    +++RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGED-LYKNEDDRRKLA 119

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVNK 1570
             M+ELEREMILSERADKK D+ L ++ R  S    ++TTRSRKE  P   +RG R+S   
Sbjct: 120  QMSELEREMILSERADKKGDKNLTERIR--SKRESERTTRSRKETPPLPSSRGVRTSARS 177

Query: 1569 SNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXX 1396
            +++   + DALNEL+A+R KQQD E   R                   RK          
Sbjct: 178  ADRAAAKDDALNELKARRLKQQDPEA-HRKLRDASRRGSGSRGFSPIKRKRFTSASLSSS 236

Query: 1395 XXXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFE 1216
                                           S  P +++IR+ITIRRSKLAKWFMEP+FE
Sbjct: 237  SSESESRSHSEDEGSTGDGGMADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFE 296

Query: 1215 ELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAA 1036
            ELIVGCFVRVGIG      IYRLC+VR+VDA+DP++PYKLEN+TT+KYLNV WGNES+AA
Sbjct: 297  ELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAA 356

Query: 1035 NWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQM 856
             WQMA +SDS P E+E+ +W REVERSGGRMP+ Q++ +K+EAI K+NTFVYSAATVKQM
Sbjct: 357  RWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQM 416

Query: 855  LQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKA 676
            LQEKKSASS+P NVAAEKDRLRRE+EVAQS++DDAEVERIRAR+QELEASRQ + KD+KA
Sbjct: 417  LQEKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKA 476

Query: 675  VRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXX 496
            +RLAEMNRKNRAENF+NASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP       
Sbjct: 477  IRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP-AGGDAA 535

Query: 495  XXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTEL 316
                     TVA+     +   AG  +E               AGKLVDT+AP+D GTE 
Sbjct: 536  AATNNEASGTVAVANKTES--AAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTES 593

Query: 315  NSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDY 136
            N+ H+FELPISL  LQK+GG QGA +GFMARKQ+IEATIG RV END +RH LTLTVSDY
Sbjct: 594  NTLHNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDY 653

Query: 135  KRRRGLL 115
            KRRRGLL
Sbjct: 654  KRRRGLL 660


>ref|XP_012091565.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
            curcas] gi|643703874|gb|KDP20938.1| hypothetical protein
            JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  634 bits (1634), Expect = e-178
 Identities = 365/667 (54%), Positives = 434/667 (65%), Gaps = 5/667 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTGS GR +++ P S+R+RE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR +  ER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDD-LYKDEDDRRKLA 119

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVNK 1570
             M+ELEREMILSERADKK D+ L ++ R  S    ++ TRSRKE  P   +RG R+S   
Sbjct: 120  QMSELEREMILSERADKKGDKNLTERIR--SKRDSERATRSRKETPPLPSSRGVRTSARS 177

Query: 1569 SNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXX 1396
            +++   + DALNELRAK + +Q      R                   RK          
Sbjct: 178  ADRAAAKDDALNELRAK-RLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSS 236

Query: 1395 XXXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFE 1216
                                           S    Y++IR++TIRRSKLAKW MEP+FE
Sbjct: 237  SSESDSRSHSEDEASTGDGGMADSDEDREPGSEGLTYDDIREVTIRRSKLAKWLMEPWFE 296

Query: 1215 ELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAA 1036
            ELIVGCFVRVGIG      IYRLC+VR+VDA+DP++PYKLEN+TT+KYLNV WGNES+AA
Sbjct: 297  ELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAA 356

Query: 1035 NWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQM 856
             WQMA VSDS P E+E+ +W REVERSGGRMP+ Q++ +K+EAI+K+NTFVYSAATVKQM
Sbjct: 357  RWQMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQM 416

Query: 855  LQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKA 676
            LQEKKSAS++P NVAAEKDRLRRE+EVAQ ++DDAEVERIRAR+QELEASRQA++KD+KA
Sbjct: 417  LQEKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKA 476

Query: 675  VRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXX 496
            +RLAEMNRKNRAENF+NASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP       
Sbjct: 477  IRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP---GGAD 533

Query: 495  XXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTEL 316
                     T A+    +NG   G L+E               AGKLVDT+AP+D GTE 
Sbjct: 534  VAAEANNNGTAAV--AHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTES 591

Query: 315  NSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDY 136
            N+ HDF+LPISL  L+K+GG +GA +GFMARKQ+IEAT+G RVPENDGRRHALTLTVSDY
Sbjct: 592  NTLHDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDY 651

Query: 135  KRRRGLL 115
            KRRRGLL
Sbjct: 652  KRRRGLL 658


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  631 bits (1628), Expect = e-178
 Identities = 361/665 (54%), Positives = 425/665 (63%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+ +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKVAVPRKQSPPMSSSRMRASARSA 176

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S  P ++++++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEEL 296

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA VSDS PLEEEF +W +EV+RSGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RL ELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALK 476

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASE+KPVNT LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNN 536

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                      +    +NG GA   +E               AGKLVDTSAP+D GTE N 
Sbjct: 537  SVNGN-----VAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNM 591

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELPISLA LQK+GG QGA +GFMARKQKIEAT+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 592  LHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKR 651

Query: 129  RRGLL 115
            RRGLL
Sbjct: 652  RRGLL 656


>ref|XP_010646904.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Vitis
            vinifera]
          Length = 658

 Score =  630 bits (1626), Expect = e-177
 Identities = 369/668 (55%), Positives = 429/668 (64%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+RE                    +++RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       +L 
Sbjct: 61   GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSD---LYKNEDDRQQLA 117

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVNK 1570
             +TELEREMIL++RA KK D++L +K R   S   K+ T+SRKE  P  L+RG RSS   
Sbjct: 118  QLTELEREMILTDRATKKTDKKLHEKLR---SKRGKEKTQSRKESPPLQLSRGVRSSARS 174

Query: 1569 SNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXX 1396
            +++   + DALNELRAKR K QD E  R+                   R           
Sbjct: 175  ADRAAAKDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAASLSSSS 234

Query: 1395 XXXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFE 1216
                                         + S VP +E+I+ ITIRRSKLAKWFMEPFFE
Sbjct: 235  QSESDGGSRSEDEGSTGDGAMVDSDDDRGIGSDVPTFEDIKSITIRRSKLAKWFMEPFFE 294

Query: 1215 ELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAA 1036
            ELIVGCFVRVGIG      IYRLC+VR+VDASDP++ Y+LEN+TT+KYLN  WGNE+++A
Sbjct: 295  ELIVGCFVRVGIGKSRSGPIYRLCMVRNVDASDPDRHYQLENKTTYKYLNCVWGNENSSA 354

Query: 1035 NWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQM 856
             WQMA VSDS PL EEF++W +EVERSG RM + Q++ +KREAI+KTN FVYSAAT KQM
Sbjct: 355  RWQMAMVSDSGPLMEEFNQWVKEVERSGSRMLTKQDILEKREAIQKTNMFVYSAATGKQM 414

Query: 855  LQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKA 676
            LQEKKS SS+P N+ AEKDRLRREMEVA S+ D AEVERI  RLQ+LEASR++K+KD+KA
Sbjct: 415  LQEKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEASRRSKEKDAKA 474

Query: 675  VRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXX 496
            +RLAEMNRKNRAENFKNASE K VNTSLKAGEAGYDPFSRRWTRSRNYYVSKP       
Sbjct: 475  IRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGGDEAA 534

Query: 495  XXXXXXXXAT-VAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 319
                    A  V  G   T G GA    E               AGKLVDTSAP+D GTE
Sbjct: 535  AVANGEAPAAFVGAGSNGTGGKGA----EVGVAATAAALEAAADAGKLVDTSAPVDQGTE 590

Query: 318  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSD 139
             N+ HDFELPISLAGLQK+GGPQGA +GFMARKQ+IEAT+G RVPENDGRRHALTLTV D
Sbjct: 591  SNTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHALTLTVGD 650

Query: 138  YKRRRGLL 115
            YKRRRGLL
Sbjct: 651  YKRRRGLL 658


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  625 bits (1613), Expect = e-176
 Identities = 359/665 (53%), Positives = 427/665 (64%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTG-SGRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG SGR +HS P S+R+ +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + +ER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDD-LYKDEDDRRKLS 119

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             MTEL+REMILS+RA KK+D+ L  K   AS   + K +  RK+  P   +R R+S   +
Sbjct: 120  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKVSVPRKQSPPMSSSRMRASARSA 177

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K DALNELRAKR KQQD E  R+                                 
Sbjct: 178  DRSAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSE 237

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 238  SESRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 297

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 298  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 357

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA VSDS PLEEEF +W +EV+RSGGRMP+ Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 358  QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQ 417

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEV+RI+ARLQELEASR AK KD+KA++
Sbjct: 418  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALK 477

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYY  +          
Sbjct: 478  LAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVN 537

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                    +  GPG TN  GA   +E               AGKLVDTSAP+D GTE N 
Sbjct: 538  G-------IVAGPG-TNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNM 589

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELPISLA LQKYGG QGA +GFMARKQ+IE+T+GFRV ENDGRRH+LTL+VSDYKR
Sbjct: 590  LHNFELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKR 649

Query: 129  RRGLL 115
            RRGLL
Sbjct: 650  RRGLL 654


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  625 bits (1611), Expect = e-176
 Identities = 358/665 (53%), Positives = 422/665 (63%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+ +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSE 236

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNN 536

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                      +    +N  GA   +E               AGKLVDTSAP+D GTE N 
Sbjct: 537  IVNGN-----VAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNM 591

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELPISLA LQKYGG  GA +GFMARKQ+IE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 592  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 651

Query: 129  RRGLL 115
            RRGLL
Sbjct: 652  RRGLL 656


>ref|XP_010057458.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Eucalyptus
            grandis] gi|629109481|gb|KCW74627.1| hypothetical protein
            EUGRSUZ_E03353 [Eucalyptus grandis]
          Length = 653

 Score =  622 bits (1605), Expect = e-175
 Identities = 359/667 (53%), Positives = 433/667 (64%), Gaps = 5/667 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRT-GSGRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRT G GR + S P S+R+RE                    +++RKPS
Sbjct: 1    MADLENLLLEAAGRTNGRGRNKQSLPPSRRRREGSYSDHGSDSRDDESDDNRGYSSRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR+E  +                                 DLY       +L 
Sbjct: 61   GSQVPLKKRYERDD----DQGSLEEGDDDYGGSDRRGDSSDESDVGSDLYKNEDDRQRLA 116

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             ++ELEREMIL+ERA+K  D+ + K  R      ++KT++SRKE +PPL +RGRSS   +
Sbjct: 117  KLSELEREMILAERAEKMTDKSMAKNLR-----KDRKTSQSRKE-TPPLASRGRSSSRSA 170

Query: 1566 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            ++   + +ALNELRAKR KQQD E  R+                   +            
Sbjct: 171  DRAAAKDEALNELRAKRLKQQDPEAHRKLRDGSRGGSGNRDLSSAKRKAFPASSLSSSSR 230

Query: 1392 XXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1213
                                        + S   K+E++++IT+RRSKL KWFMEPFFEE
Sbjct: 231  SESESRSDSDDDASTGDGLVDSDDDRALLGSETLKFEDVKEITVRRSKLGKWFMEPFFEE 290

Query: 1212 LIVGCFVRVGIGMRSGRS-IYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAA 1036
            LIVGCFVRVGIGM   R  IYRLCI+R+VDASDP++ YKLEN+ T+KYLNV WGNES+AA
Sbjct: 291  LIVGCFVRVGIGMSKSRQPIYRLCIIRNVDASDPDRQYKLENKMTYKYLNVVWGNESSAA 350

Query: 1035 NWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQM 856
             WQMA VSDSPPLEEEF++W REVERSGGRMPS Q+V +K+EAI+K NTFVYSAATVKQM
Sbjct: 351  RWQMAMVSDSPPLEEEFNQWVREVERSGGRMPSKQDVLEKKEAIKKINTFVYSAATVKQM 410

Query: 855  LQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKA 676
            LQEKKSASS+P N+AAEKDRLRRE+E+AQ + D+AEV+RI+ +LQ+LEA+RQA+  D+KA
Sbjct: 411  LQEKKSASSRPMNIAAEKDRLRRELEIAQYKEDEAEVKRIKEKLQQLEATRQAQKTDAKA 470

Query: 675  VRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXX 496
            ++LAEMNRKNR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYVSKP       
Sbjct: 471  IKLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKP---NGGS 527

Query: 495  XXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTEL 316
                      VA     +NG     +SE               AGKLVDT+AP+D GTE 
Sbjct: 528  EAGGANDNVNVASMVAESNG-SVPVVSESGVVATVEALEAAADAGKLVDTNAPVDQGTES 586

Query: 315  NSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDY 136
            N  H+FELPISL  L+K+GG QGA +GFM+RKQ+IEAT+G RVPENDGRRH LTLTVSDY
Sbjct: 587  NLLHNFELPISLNVLRKFGGAQGALTGFMSRKQRIEATVGCRVPENDGRRHILTLTVSDY 646

Query: 135  KRRRGLL 115
            KRRRGLL
Sbjct: 647  KRRRGLL 653


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  619 bits (1595), Expect = e-174
 Identities = 363/666 (54%), Positives = 415/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPVFTNRKPSA 1924
            MADLENLLLEAAGRT S GR +HS   SKR+RE                   + +RKPS 
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG-YGSRKPSG 59

Query: 1923 SQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLES 1744
            SQVPLKKR +  ER                                              
Sbjct: 60   SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHG------------Q 107

Query: 1743 MTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSP-PLLARGRSSVNKS 1567
            MTELEREM++ ER DKK D+ L+ K R   S  E+++TRS KE  P P     R +   +
Sbjct: 108  MTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLAARSA 164

Query: 1566 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            ++   + DALNELRAKR KQQD E  RR                   +            
Sbjct: 165  DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224

Query: 1392 XXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1213
                                          S  P Y++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 225  SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284

Query: 1212 LIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1033
            LIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLENRTT KYLNV WGNES+AA 
Sbjct: 285  LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344

Query: 1032 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 853
            WQMA VSDSPPLEEEF +W REVER+GGRMPS Q+V +K+E+I+K NTFVYSAATVKQML
Sbjct: 345  WQMAMVSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQML 404

Query: 852  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 673
            QEKKSASS+P NVAAEKDRLRRE+EVAQSR DD ++ERI+ RLQELEASR +K KD+KA+
Sbjct: 405  QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAI 464

Query: 672  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 493
            RLAEMNRKNR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP        
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 492  XXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 313
                         PG  NG   G   E               AGKLVDT+APLD GTE N
Sbjct: 525  NGDKNGV------PGGANG-EEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577

Query: 312  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYK 133
              HDFEL ISL  L+K+GGPQG  +GFMARKQ+IEAT+G +VPENDGRRHALTLTV DYK
Sbjct: 578  MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637

Query: 132  RRRGLL 115
            RRRGLL
Sbjct: 638  RRRGLL 643


>gb|KHN07280.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  616 bits (1589), Expect = e-173
 Identities = 357/665 (53%), Positives = 418/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+ +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP--------- 527

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                     A G    NG  AG  S                    VDTSAP+D GTE N 
Sbjct: 528  -----GEKAAAGNNIVNGNVAGAGSN-GTGAPVTVEAGMVAIAAAVDTSAPVDQGTESNM 581

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELPISLA LQKYGG  GA +GFMARKQ+IE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 582  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 641

Query: 129  RRGLL 115
            RRGLL
Sbjct: 642  RRGLL 646


>ref|XP_004505022.1| PREDICTED: protein RTF1 homolog [Cicer arietinum]
            gi|502142571|ref|XP_004505023.1| PREDICTED: protein RTF1
            homolog [Cicer arietinum]
          Length = 658

 Score =  616 bits (1589), Expect = e-173
 Identities = 355/666 (53%), Positives = 421/666 (63%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTG--SGRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKP 1930
            MADLENLLLEAAGRTG  +GR +HS P S+R+R+                  + + +RKP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 1929 SASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKL 1750
            S SQVPLKKR + TER                                 LY       KL
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDD-LYKDEDDRRKL 119

Query: 1749 ESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNK 1570
              M+EL+REMILS+RA KK+D+ L  K   AS   + K   + K+  P   +R R+S   
Sbjct: 120  SEMSELQREMILSDRASKKDDKSLLGKI--ASKREKGKAIMTGKQSPPLSSSRMRASARS 177

Query: 1569 SNKPQKD-ALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            +++  K+ ALNELRAKR KQQD E  RR                                
Sbjct: 178  ADRSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHS 237

Query: 1392 XXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1213
                      +                   S  P +++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 238  DSDSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEE 297

Query: 1212 LIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1033
            LIVGCFVRVGIG      IYRLC+V++VD+SDP++ YKLENRTTHKYLNV WGNES+AA 
Sbjct: 298  LIVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAAR 357

Query: 1032 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 853
            WQMA VSDS PLEEEF +W +EVERSGGRMP+ Q+V +K++AI+K  TFVYSA TVKQML
Sbjct: 358  WQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQML 417

Query: 852  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 673
            QEKKS+SS+P NVAAEKDRLRREME+AQS+ D+AEVERI+ R+QELEASR AK KD+KA+
Sbjct: 418  QEKKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKAL 477

Query: 672  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 493
            +LAEMNRKNR ENFKNASEL+PVN  LKAGEAGYDPFSRRWTRSRNYYV+KP        
Sbjct: 478  KLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKP-----GEK 532

Query: 492  XXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 313
                     V +    +N  G    +E               AGKLVDTSAP+D GTE N
Sbjct: 533  AAARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESN 592

Query: 312  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYK 133
              H+FELPISLA L KYGG QGA +GFMARKQ++EAT+GFRV ENDGRRH LTL+V DYK
Sbjct: 593  FLHNFELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYK 652

Query: 132  RRRGLL 115
            RRRGLL
Sbjct: 653  RRRGLL 658


>gb|KHN13191.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  616 bits (1588), Expect = e-173
 Identities = 357/665 (53%), Positives = 418/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+ +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSE 236

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP--------- 527

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                     A G    NG  AG  S                    VDTSAP+D GTE N 
Sbjct: 528  -----GEKAAAGNNIVNGNVAGAGSN-GTGAPVTVEAGMVAIAAAVDTSAPVDQGTESNM 581

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELPISLA LQKYGG  GA +GFMARKQ+IE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 582  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 641

Query: 129  RRGLL 115
            RRGLL
Sbjct: 642  RRGLL 646


>gb|KHN10031.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 646

 Score =  616 bits (1588), Expect = e-173
 Identities = 357/665 (53%), Positives = 418/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+ +                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRNDHDGDSSDESNIGDD--LYKDEDDRRKLS 118

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             MTEL+REMILS+RA KK+D+ L  K   AS   + K    RK+  P   +R R+S   +
Sbjct: 119  EMTELQREMILSDRATKKDDKNLLGKI--ASKREKGKAAAPRKQSPPMSSSRMRASARSA 176

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K DALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSE 236

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S  P +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VDAS+P++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA VSDS P+EEEF +W +EV+ SGGRMPS Q+V +K++AI+K  TFVYSAATVKQMLQ
Sbjct: 357  QMAMVSDSAPIEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSAS++P NVAAEKDRLRRE+E+AQS+ D+AEVERI+ RLQELEASRQAK KD+KA++
Sbjct: 417  EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY +KP         
Sbjct: 477  LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKP--------- 527

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                     A G    NG  AG  S                    VDTSAP+D GTE N 
Sbjct: 528  -----GEKAAAGNNIVNGNVAGAGSN-GTGAPVTVEAGMVAIAAAVDTSAPVDQGTESNM 581

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELPISLA LQKYGG  GA +GFMARKQ+IE+T+GFRV ENDGRRHALTLTVSDYKR
Sbjct: 582  LHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKR 641

Query: 129  RRGLL 115
            RRGLL
Sbjct: 642  RRGLL 646


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  615 bits (1587), Expect = e-173
 Identities = 361/666 (54%), Positives = 415/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPVFTNRKPSA 1924
            MADLENLLLEAAGRT S GR +HS   SKR+RE                   + +RKPS 
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG-YGSRKPSG 59

Query: 1923 SQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLES 1744
            SQVPLKKR + TER                                              
Sbjct: 60   SQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHG------------Q 107

Query: 1743 MTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSP-PLLARGRSSVNKS 1567
            MTELEREM++ ER DKK D+ L+ K R   S  E+++TRS KE  P P     R +   +
Sbjct: 108  MTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLAARSA 164

Query: 1566 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            ++   + DALNELRAKR KQQD E  RR                   +            
Sbjct: 165  DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224

Query: 1392 XXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1213
                                          S  P Y++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 225  SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284

Query: 1212 LIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1033
            LIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLENRTT KYLNV WGNES+AA 
Sbjct: 285  LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344

Query: 1032 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 853
            WQMA VSDSPPLEEEF +W REVER+ GRMPS Q+V +K+++I+K NTFVYSAATVKQML
Sbjct: 345  WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQML 404

Query: 852  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 673
            QEKKSASS+P NVAAEKDRLRRE+EVAQSR D+ ++ERI+ RLQELEASR +K KD+KA+
Sbjct: 405  QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464

Query: 672  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 493
            RLAEMNRKNR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP        
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 492  XXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 313
                         PG  NG   G   E               AGKLVDT+APLD GTE N
Sbjct: 525  NGDKNGV------PGGANG-EEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577

Query: 312  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYK 133
              HDFEL ISL  L+K+GGPQG  +GFMARKQ+IEAT+G +VPENDGRRHALTLTV DYK
Sbjct: 578  MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637

Query: 132  RRRGLL 115
            RRRGLL
Sbjct: 638  RRRGLL 643


>ref|XP_011027887.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Populus
            euphratica]
          Length = 662

 Score =  615 bits (1586), Expect = e-173
 Identities = 354/668 (52%), Positives = 424/668 (63%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTG-SGRKQHS-RPQSKRQREXXXXXXXXXXXXXXXXGP-VFTNRKP 1930
            MADLENLLLEAAGRTG SGR ++S  P  +R+RE                    + NRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRAYANRKP 60

Query: 1929 SASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKL 1750
            S SQVPLKKR E+ ER                                 LY       KL
Sbjct: 61   SGSQVPLKKRLETNERDEEEGSQDEGDYDGGGSDREGGSSDESDIGDD-LYKDEDDRKKL 119

Query: 1749 ESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVN 1573
              M+EL+RE+IL++RADKK D+ L +K R        K TRSRKE  P    RG RSS  
Sbjct: 120  AQMSELDRELILADRADKKGDKHLTEKIR--LKRDNDKPTRSRKETPPLPSTRGVRSSAR 177

Query: 1572 KSNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXX 1399
             +++   + DALNELRA ++ +Q      R                   +          
Sbjct: 178  SADRAAAKDDALNELRA-KRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSS 236

Query: 1398 XXXXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFF 1219
                                            S  P YE+I++ITIRR+KLAKWFMEP+F
Sbjct: 237  SSSESGSRSHSEDEGSTGDGGMADSDEDVEPGSQGPTYEDIKEITIRRTKLAKWFMEPWF 296

Query: 1218 EELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1039
            EELI+GCFVRVGIG      +YRLC+VR+VDA++P+KPYKLEN++T+KYLNV WG +++A
Sbjct: 297  EELIIGCFVRVGIGRSRSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSA 356

Query: 1038 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 859
            A WQMA VSDS P EEE+ +W REVE  GGR+PS Q++ +K+EAI K+NTFVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQ 416

Query: 858  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 679
            MLQEKKSASS+P NVAAEKDRLRRE+E+AQS+ D+AEVERI AR++ELEASRQAK KD+K
Sbjct: 417  MLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRQAKVKDAK 476

Query: 678  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 499
            A+RLAEMNRKNR ENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYVSKP      
Sbjct: 477  AIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDP 536

Query: 498  XXXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 319
                       VA+   A+N + AG +SE               AGKLVDTSAP+D GTE
Sbjct: 537  DATKISEANEAVAV--AASNQVVAGVMSEAGVAATAAALEAAADAGKLVDTSAPVDQGTE 594

Query: 318  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSD 139
             N+ H FE+ ISL  LQ++GGPQGA +GFMARKQ+IEAT+G RVPENDGRRHALTLTV D
Sbjct: 595  SNTMHSFEIEISLTALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGD 654

Query: 138  YKRRRGLL 115
            YKRRRGLL
Sbjct: 655  YKRRRGLL 662


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  615 bits (1586), Expect = e-173
 Identities = 355/668 (53%), Positives = 425/668 (63%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTG-SGRKQHS-RPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKP 1930
            MADLENLLLEAAGRTG SGR ++S  P  +R+RE                    + NRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 1929 SASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKL 1750
            S SQVPLKKR E+ ER                                 LY       KL
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDD-LYKDEDDRKKL 119

Query: 1749 ESMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVN 1573
              M+EL+RE+IL++RADKK D+ L +K R        K TRSRKE  P   +RG RSS  
Sbjct: 120  AQMSELDRELILADRADKKGDKHLTEKIR--LKRDNDKPTRSRKETPPLPSSRGVRSSAR 177

Query: 1572 KSNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXX 1399
             +++   + DALNELRA ++ +Q      R                   +          
Sbjct: 178  SADRAAAKDDALNELRA-KRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSS 236

Query: 1398 XXXXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFF 1219
                                            S  P YE+I++ITIRR+KLAKWFMEP+F
Sbjct: 237  SSSESGSRSHSEDEGSTGDGGMADSDEDVEPGSKGPTYEDIKEITIRRTKLAKWFMEPWF 296

Query: 1218 EELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1039
            EELI+GCFVRVGIG      +YRLC+VR+VDA++P+KPYKLEN++T+KYLNV WG +++A
Sbjct: 297  EELIIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSA 356

Query: 1038 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 859
            A WQMA VSDS P EEE+ +W REVE  GGR+PS Q++ +K+EAI K+NTFVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQ 416

Query: 858  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 679
            MLQEKKSASS+P NVAAEKDRLRRE+E+AQS+ D+AEVERI AR++ELEASR AK KD+K
Sbjct: 417  MLQEKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAK 476

Query: 678  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 499
            A+RLAEMNRKNR ENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYVSKP      
Sbjct: 477  AIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDP 536

Query: 498  XXXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 319
                      TVA+   A+N + AG +SE               AGKLVDTSAP+D GTE
Sbjct: 537  VATKISEANETVAV--AASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTE 594

Query: 318  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSD 139
             N+ H FEL ISL  LQ++GGPQGA +GFMARKQ+IEAT+G RVPENDGRRHALTLTV D
Sbjct: 595  SNTMHSFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGD 654

Query: 138  YKRRRGLL 115
            YKRRRGLL
Sbjct: 655  YKRRRGLL 662


>gb|KDO47969.1| hypothetical protein CISIN_1g006477mg [Citrus sinensis]
            gi|641828832|gb|KDO47970.1| hypothetical protein
            CISIN_1g006477mg [Citrus sinensis]
          Length = 643

 Score =  615 bits (1585), Expect = e-173
 Identities = 361/666 (54%), Positives = 414/666 (62%), Gaps = 4/666 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPVFTNRKPSA 1924
            MADLENLLLEAAGRT S GR +HS   SKR+RE                   + +RKPS 
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG-YGSRKPSG 59

Query: 1923 SQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLES 1744
            SQVPLKKR +  ER                                              
Sbjct: 60   SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHG------------Q 107

Query: 1743 MTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSP-PLLARGRSSVNKS 1567
            MTELEREM++ ER DKK D+ L+ K R   S  E+++TRS KE  P P     R +   +
Sbjct: 108  MTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLAARSA 164

Query: 1566 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            ++   + DALNELRAKR KQQD E  RR                   +            
Sbjct: 165  DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224

Query: 1392 XXXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEE 1213
                                          S  P Y++I++ITIRRSKLAKWFMEPFFEE
Sbjct: 225  SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284

Query: 1212 LIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAAN 1033
            LIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLENRTT KYLNV WGNES+AA 
Sbjct: 285  LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344

Query: 1032 WQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQML 853
            WQMA VSDSPPLEEEF +W REVER+ GRMPS Q+V +K+E+I+K NTFVYSAATVKQML
Sbjct: 345  WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQML 404

Query: 852  QEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAV 673
            QEKKSASS+P NVAAEKDRLRRE+EVAQSR D+ ++ERI+ RLQELEASR +K KD+KA+
Sbjct: 405  QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464

Query: 672  RLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXX 493
            RLAEMNRKNR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP        
Sbjct: 465  RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524

Query: 492  XXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELN 313
                         PG  NG   G   E               AGKLVDT+APLD GTE N
Sbjct: 525  NGDKNGV------PGGANG-EEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577

Query: 312  SQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYK 133
              HDFEL ISL  L+K+GGPQG  +GFMARKQ+IEAT+G +VPENDGRRHALTLTV DYK
Sbjct: 578  MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637

Query: 132  RRRGLL 115
            RRRGLL
Sbjct: 638  RRRGLL 643


>ref|XP_012455370.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium
            raimondii] gi|763802543|gb|KJB69481.1| hypothetical
            protein B456_011G025800 [Gossypium raimondii]
            gi|763802544|gb|KJB69482.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
            gi|763802545|gb|KJB69483.1| hypothetical protein
            B456_011G025800 [Gossypium raimondii]
          Length = 660

 Score =  607 bits (1565), Expect = e-170
 Identities = 359/669 (53%), Positives = 429/669 (64%), Gaps = 7/669 (1%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGSG-RKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+G R +HS P S+R+RE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR +  ER                                 LY       +L 
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDD-LYKNEEDRRQLA 119

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARG-RSSVNK 1570
             +TELEREMILSERADK+ D++  +K R  S     + +RS++E +PPL +RG RSS   
Sbjct: 120  QLTELEREMILSERADKRGDKKFTEKIR--SKRENDRPSRSQRE-TPPLPSRGVRSSARS 176

Query: 1569 SNKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXX 1396
            +++   + DALNELRA ++ +Q      R                   RKP         
Sbjct: 177  ADRAAAKDDALNELRA-KRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSS 235

Query: 1395 XXXXXXXXXXSKXXXXXXXXXXXXXXXXXVN--SSVPKYENIRDITIRRSKLAKWFMEPF 1222
                      S+                      + P + +I++ITIRRSKLAKW MEPF
Sbjct: 236  SQSESESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPF 295

Query: 1221 FEELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNEST 1042
            FEELIVGCFVRVGIG     +IYRLC+VR+VDA+DP++ YKLEN+TT+KYLNV WGNES+
Sbjct: 296  FEELIVGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESS 355

Query: 1041 AANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVK 862
            AA WQMA +SDSPPLEEEF +  REVERSGGRMPS Q+V +K+EA++K  TFVYSAATVK
Sbjct: 356  AARWQMAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVK 415

Query: 861  QMLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDS 682
            QMLQEKKS+SS+P NVAAEKDRLRR++E+AQS+ DD EVERI+ RLQ+LEASRQ+++KD+
Sbjct: 416  QMLQEKKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDA 475

Query: 681  KAVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXX 502
            KAVRLAEMNRKNR ENFKNAS LKPVNT LKAGEAGYDPFSRRWTRSRNYY +K      
Sbjct: 476  KAVRLAEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDA 535

Query: 501  XXXXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGT 322
                         AIG G  N  GA   +E               AGKLVDT+AP+D GT
Sbjct: 536  AAVANGDTNG---AIGSGNGNDAGAA-AAEAGRAATAAALQEAAGAGKLVDTNAPVDEGT 591

Query: 321  ELNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVS 142
            E N  HDFELPISL  L+K+GG +GA +GFMARKQ+IEAT+G RVPENDGRRHALTLTVS
Sbjct: 592  ESNMLHDFELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVS 651

Query: 141  DYKRRRGLL 115
            DYKRRRGLL
Sbjct: 652  DYKRRRGLL 660


>ref|XP_008453742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            melo] gi|659107574|ref|XP_008453743.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis melo]
          Length = 660

 Score =  597 bits (1538), Expect = e-167
 Identities = 352/668 (52%), Positives = 421/668 (63%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGSGR-KQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRT +G   +HS P S+RQRE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDD-LYKDDDDRRKLA 119

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             M+EL+REMILS+RA KKND+ L +  R  + + + KT  SRKE  P   +R RSS   +
Sbjct: 120  GMSELQREMILSDRASKKNDKHLYESLR--AKMDKGKTAPSRKETPPLPSSRIRSSARSA 177

Query: 1566 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            ++   + DALNELRAKR K Q      R                   RKP          
Sbjct: 178  DRAAAKDDALNELRAKRLK-QQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSS 236

Query: 1392 XXXXXXXXXS--KXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFF 1219
                     S  +                   S  P +E+I++ITIRRSKLAKW MEPFF
Sbjct: 237  QSESESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFF 296

Query: 1218 EELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1039
            EELIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLEN+ THKYLNV WGNE++A
Sbjct: 297  EELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSA 356

Query: 1038 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 859
            A WQMA VSDS PLE+E+ +W +EVER+GGRM S Q+V +K++AI+K N FVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQ 416

Query: 858  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 679
            MLQ+KKSAS++P N+AAEKDRLRREM+VA S+ D+AEVERI+ RLQ+LEASR+ + KD+K
Sbjct: 417  MLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAK 476

Query: 678  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 499
            A+RLAEMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS        
Sbjct: 477  AIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGA 535

Query: 498  XXXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 319
                      T A+    T   GAG  S+               AGKLVDT+AP+DGGTE
Sbjct: 536  AEAAGNSDTVTPALESTRT---GAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTE 592

Query: 318  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSD 139
             NS H+FELPISLA LQK+GG  GA +GF+ARKQ+IEAT+G +VPENDGRRHALTLTVSD
Sbjct: 593  SNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSD 652

Query: 138  YKRRRGLL 115
            YKRRRGLL
Sbjct: 653  YKRRRGLL 660


>gb|KEH31113.1| RNA polymerase-associated RTF1-like protein [Medicago truncatula]
          Length = 655

 Score =  596 bits (1537), Expect = e-167
 Identities = 342/665 (51%), Positives = 415/665 (62%), Gaps = 3/665 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRTG+ GR +HS P S+R+R+                  + + +RKPS
Sbjct: 1    MADLENLLLEAAGRTGAAGRNRHSLPPSRRRRDGSYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR +  +R                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPADRDDDLGSQEEADDDGRSDREGDTSDESNIGDD--LYKDEDDRRKLS 118

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             M+EL+REMILS+RA KK+D+ L  K   AS   + K   + K+  P   +R R+S   +
Sbjct: 119  EMSELQREMILSDRASKKDDKSLLGKI--ASKREKGKAIMTGKQSPPLSSSRMRASARSA 176

Query: 1566 NKPQK-DALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXXX 1390
            ++  K +ALNELRAKR KQQD E  RR                                 
Sbjct: 177  DRSAKNEALNELRAKRLKQQDPEAHRRLREASRSSGPRNFSPPKRKSFTSANLSSSSHSD 236

Query: 1389 XXXXXXXXSKXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFFEEL 1210
                     +                   S    +++I++ITIRRSKLAKWFMEPFFEEL
Sbjct: 237  SESRSHSDDEGSTGDGGIADSDDDRALSGSEGLSFQDIKEITIRRSKLAKWFMEPFFEEL 296

Query: 1209 IVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTAANW 1030
            IVGCFVRVGIG      IYRLC+V++VD+SDP++ YKLEN+TT+KYLNV WGNES+AA W
Sbjct: 297  IVGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENKTTYKYLNVVWGNESSAARW 356

Query: 1029 QMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQMLQ 850
            QMA +SDSPPLEEE+ +W +EVERSGGRMPS Q+V DK++AI K  TFVYSAATVKQM+Q
Sbjct: 357  QMAMISDSPPLEEEYKQWVKEVERSGGRMPSKQDVLDKKQAINKIITFVYSAATVKQMIQ 416

Query: 849  EKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSKAVR 670
            EKKSASS+P N+AAEKDRLR ++E AQ + DDAEVERI+ARL ELEASR AK KD+KA++
Sbjct: 417  EKKSASSRPLNIAAEKDRLRSDLERAQGKNDDAEVERIKARLLELEASRHAKVKDAKALK 476

Query: 669  LAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXXXXX 490
            LAEMNRKNR ENFKNASEL+P+ T LK G+AGYDPFSRRWTRSRNYYV+ P         
Sbjct: 477  LAEMNRKNRVENFKNASELRPL-TGLKEGDAGYDPFSRRWTRSRNYYVATPSEKAAALNN 535

Query: 489  XXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTELNS 310
                      +     NG G    +E               AGKLVDTSAP+D GTE N+
Sbjct: 536  NTVG-----LVSDAGANGTGVPVTAESGAVATAIALEAAADAGKLVDTSAPVDQGTESNT 590

Query: 309  QHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSDYKR 130
             H+FELP+SLA L KYGG QGA +GFMARKQ+IE+T+GF++ ENDGRRH LTL+V DYKR
Sbjct: 591  LHNFELPVSLALLHKYGGAQGAQAGFMARKQRIESTVGFKLSENDGRRHVLTLSVGDYKR 650

Query: 129  RRGLL 115
            RRGLL
Sbjct: 651  RRGLL 655


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|778690563|ref|XP_011653135.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|700198089|gb|KGN53247.1| hypothetical protein
            Csa_4G038650 [Cucumis sativus]
          Length = 660

 Score =  595 bits (1535), Expect = e-167
 Identities = 350/668 (52%), Positives = 421/668 (63%), Gaps = 6/668 (0%)
 Frame = -3

Query: 2100 MADLENLLLEAAGRTGS-GRKQHSRPQSKRQREXXXXXXXXXXXXXXXXGPV-FTNRKPS 1927
            MADLENLLLEAAGRT + GR +HS P S+RQRE                    + +RKPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 1926 ASQVPLKKRFESTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYXXXXXXXKLE 1747
             SQVPLKKR + TER                                 LY       KL 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDD-LYKDDDDRRKLA 119

Query: 1746 SMTELEREMILSERADKKNDRQLKKKARGASSLSEKKTTRSRKEKSPPLLARGRSSVNKS 1567
             M+EL+REMILS+RA KKND+ L +  R  + + + K+  SRKE  P   +R RSS   +
Sbjct: 120  GMSELQREMILSDRASKKNDKHLYESLR--AKMDKGKSAPSRKETPPLPSSRIRSSARSA 177

Query: 1566 NKP--QKDALNELRAKRKKQQDSEGLRRTXXXXXXXXXXXXXXXXXXRKPXXXXXXXXXX 1393
            ++   + DALNELRAKR K Q      R                   RKP          
Sbjct: 178  DRAAAKDDALNELRAKRLK-QQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSS 236

Query: 1392 XXXXXXXXXS--KXXXXXXXXXXXXXXXXXVNSSVPKYENIRDITIRRSKLAKWFMEPFF 1219
                     S  +                   S  P +E+I+++TIRRSKLAKW MEPFF
Sbjct: 237  QSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFF 296

Query: 1218 EELIVGCFVRVGIGMRSGRSIYRLCIVRHVDASDPNKPYKLENRTTHKYLNVFWGNESTA 1039
            EELIVGCFVRVGIG      IYRLC+VR+VDA++P++ YKLEN+ THKYLNV WGNE++A
Sbjct: 297  EELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASA 356

Query: 1038 ANWQMARVSDSPPLEEEFDEWKREVERSGGRMPSIQEVTDKREAIEKTNTFVYSAATVKQ 859
            A WQMA VSDS PLE+E+ +W +EVER+GGRM S Q++ +K+EAI+K N FVYSAATVKQ
Sbjct: 357  ARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQ 416

Query: 858  MLQEKKSASSKPFNVAAEKDRLRREMEVAQSRRDDAEVERIRARLQELEASRQAKDKDSK 679
            MLQ+KKSAS++P N+AAEKDRLRREM+VA S+ D+AEVERI+ RLQ+LEASR+ + KD+K
Sbjct: 417  MLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAK 476

Query: 678  AVRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPXXXXXX 499
            A+RLAEMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS        
Sbjct: 477  AIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGA 535

Query: 498  XXXXXXXXXATVAIGPGATNGIGAGPLSEXXXXXXXXXXXXXXXAGKLVDTSAPLDGGTE 319
                      T A+    T    AG  S+               AGKLVDT+AP+DGGTE
Sbjct: 536  AEAAGNSDNVTPALENTRTE---AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTE 592

Query: 318  LNSQHDFELPISLAGLQKYGGPQGAHSGFMARKQKIEATIGFRVPENDGRRHALTLTVSD 139
             NS H+FELPISLA LQK+GG  GA +GF+ARKQ+IEAT+G +VPENDGRRHALTLTVSD
Sbjct: 593  SNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSD 652

Query: 138  YKRRRGLL 115
            YKRRRGLL
Sbjct: 653  YKRRRGLL 660