BLASTX nr result

ID: Cinnamomum24_contig00010042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00010042
         (557 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus c...    45   6e-09

>ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081995|gb|AEY81187.1| orf49 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 161

 Score = 45.1 bits (105), Expect(3) = 6e-09
 Identities = 29/56 (51%), Positives = 32/56 (57%)
 Frame = +1

Query: 328 GELFDSDFFLRVGRRKATSMTERAGNSRGSPLEAKARSTNP*S*PSEAEDGNQSVT 495
           G L  + FF  VGRRKATS+ + AGN RGSPLEA A              GNQSVT
Sbjct: 117 GCLIAASFFRLVGRRKATSIYKTAGNLRGSPLEAFA--------------GNQSVT 158



 Score = 32.0 bits (71), Expect(3) = 6e-09
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 8/36 (22%)
 Frame = +3

Query: 252 IGALLPSV--------ANPLISNRAERTFGTSVGRA 335
           I ALLPS+        ANP +S+RAERTFG    RA
Sbjct: 81  IRALLPSLRPHHLNLSANPFLSHRAERTFGWYFSRA 116



 Score = 29.3 bits (64), Expect(3) = 6e-09
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 314 WYFSRASCLIVTSF 355
           WYFSRA CLI  SF
Sbjct: 111 WYFSRAGCLIAASF 124


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