BLASTX nr result

ID: Cinnamomum24_contig00009609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00009609
         (280 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase ...    57   5e-06

>ref|XP_010255087.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like
           [Nelumbo nucifera]
          Length = 393

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 40/104 (38%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
 Frame = +1

Query: 4   KPDVD----LAARNYQSGFSRPGDRNWFAPPRXXXXXXXXXCD--------PIGLGLVSI 147
           K DVD     AARNY++ F R     W  P            D        P+ +GL+S+
Sbjct: 46  KSDVDPAAAAAARNYRADFKRSPTGCW--PKASASLYNSLSGDFVSDNCSSPLVMGLISM 103

Query: 148 MKXXXXXXXXXXXXXVFGISSSTMTGFKPSGLLPFFRGMKWLPC 279
           MK             +FGISSS++ GFK S LL FF+G KWLPC
Sbjct: 104 MKSSACVSGSAGMG-IFGISSSSVLGFKASSLLTFFQGTKWLPC 146


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