BLASTX nr result

ID: Cinnamomum24_contig00007536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00007536
         (510 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008805560.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    75   2e-11
ref|XP_010919414.1| PREDICTED: putative pentatricopeptide repeat...    73   6e-11
ref|XP_010276893.1| PREDICTED: pentatricopeptide repeat-containi...    71   3e-10
ref|XP_010658315.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-09
emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]    69   2e-09
ref|XP_009389324.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
ref|XP_007040339.1| Tetratricopeptide repeat superfamily protein...    64   4e-08
ref|XP_012474918.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06

>ref|XP_008805560.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g01580 [Phoenix
           dactylifera]
          Length = 695

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 34/76 (44%), Positives = 55/76 (72%)
 Frame = +3

Query: 282 TPTTYINPLPHQSDRPFLDSTTSIHLLNSYAANRDSKSTASVHAAILKCGVNTNVFVSNS 461
           +P ++  P  H ++  FLDS  ++HLLNS AA RD + T  +H+ + K G+++N+FV+NS
Sbjct: 11  SPPSHSRPPSHPNNL-FLDSAAAVHLLNSSAAQRDLRLTTCLHSGLFKSGLHSNLFVANS 69

Query: 462 LLDAYAKCGQLEASVK 509
           LLDAY+KCG+L+ + +
Sbjct: 70  LLDAYSKCGRLDCATE 85


>ref|XP_010919414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580 [Elaeis guineensis]
          Length = 696

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 10/85 (11%)
 Frame = +3

Query: 285 PTTYINPLP---HQSDRP-------FLDSTTSIHLLNSYAANRDSKSTASVHAAILKCGV 434
           P   + P P   H   RP       FLDS  ++ LLNS AA RD + T  +HA +LK G+
Sbjct: 2   PPISLQPPPSPSHPHSRPLSPPSNLFLDSAAAVRLLNSSAAQRDLRLTTCLHAGLLKSGL 61

Query: 435 NTNVFVSNSLLDAYAKCGQLEASVK 509
           ++NVFV+NSLLD Y+KCG+L+++ +
Sbjct: 62  HSNVFVANSLLDVYSKCGRLDSATE 86


>ref|XP_010276893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Nelumbo nucifera]
          Length = 711

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
 Frame = +3

Query: 246 KFPDTQNQIRSNTPT---TYINPLPHQSDRPFLDSTTSIHLLNSYAANRDSKSTASVHAA 416
           K    Q QI S   T   T    LP +      DS  ++HLLNS  + R+ K    +HA 
Sbjct: 16  KLSSVQEQIGSKKTTNKETLHLKLPPEEPPLLFDSRAAVHLLNSCTSARNLKLGLCIHAH 75

Query: 417 ILKCGVNTNVFVSNSLLDAYAKCGQLEASVK 509
           +LK G+++NVFVSNSLLD YAKCG+LE + K
Sbjct: 76  VLKSGLHSNVFVSNSLLDFYAKCGRLEDASK 106


>ref|XP_010658315.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
           gi|297742233|emb|CBI34382.3| unnamed protein product
           [Vitis vinifera]
          Length = 705

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 31/58 (53%), Positives = 45/58 (77%)
 Frame = +3

Query: 336 DSTTSIHLLNSYAANRDSKSTASVHAAILKCGVNTNVFVSNSLLDAYAKCGQLEASVK 509
           DS T++ +L+S AANRD +  + +H  ILK G++TNVFV+NSL+D YAKCG++E + K
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAK 98


>emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
          Length = 630

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 31/58 (53%), Positives = 45/58 (77%)
 Frame = +3

Query: 336 DSTTSIHLLNSYAANRDSKSTASVHAAILKCGVNTNVFVSNSLLDAYAKCGQLEASVK 509
           DS T++ +L+S AANRD +  + +H  ILK G++TNVFV+NSL+D YAKCG++E + K
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAK 98


>ref|XP_009389324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Musa acuminata subsp. malaccensis]
          Length = 690

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 33/78 (42%), Positives = 53/78 (67%)
 Frame = +3

Query: 276 SNTPTTYINPLPHQSDRPFLDSTTSIHLLNSYAANRDSKSTASVHAAILKCGVNTNVFVS 455
           S +P    +PL H S   F DS  S+  L+  AA ++   TAS+H+ +LK G ++ +FV+
Sbjct: 6   SISPFLSPSPLSH-SKNLFFDSAASVRYLSFSAAQQNLGFTASLHSGLLKSGFHSTLFVA 64

Query: 456 NSLLDAYAKCGQLEASVK 509
           NSLLDAY+KCG++++++K
Sbjct: 65  NSLLDAYSKCGRMDSALK 82


>ref|XP_007040339.1| Tetratricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508777584|gb|EOY24840.1| Tetratricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 718

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = +3

Query: 258 TQNQIRSNTPTTYINPLPHQ---SDRPFLDSTTSIHLLNSYAANRDSKSTASVHAAILKC 428
           T  + R+N P  +   L  Q   SD    DS +++H L S  A+R  +  + +H  +LK 
Sbjct: 25  TTKEPRNNNPVQFRKSLSSQNLSSDIAAPDSVSTVHALKSCTASRSLELGSCIHGTVLKS 84

Query: 429 GVNTNVFVSNSLLDAYAKCGQLEASVK 509
           G+ TNVFV+NSLLD Y KCG  E + K
Sbjct: 85  GLCTNVFVNNSLLDMYMKCGSTEEARK 111


>ref|XP_012474918.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Gossypium raimondii]
           gi|763756979|gb|KJB24310.1| hypothetical protein
           B456_004G138500 [Gossypium raimondii]
          Length = 703

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = +3

Query: 246 KFPDTQNQIRSNTPTTYINPLPHQS---DRPFLDSTTSIHLLNSYAANRDSKSTASVHAA 416
           +FP    + + ++P    N L + +       LDS +++ LL S   +R+ +  + +HA 
Sbjct: 11  QFPKQGKKTKDDSPYRLRNSLSNHNFSYQLLALDSVSTVQLLRSCTGSRNLELGSCIHAV 70

Query: 417 ILKCGVNTNVFVSNSLLDAYAKCGQLE 497
           +LK  + TNVFV NSLL  YAKCG +E
Sbjct: 71  VLKSRLQTNVFVDNSLLHMYAKCGCIE 97


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