BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00006114
         (2212 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012067059.1| PREDICTED: mediator of RNA polymerase II tra...   857   0.0  
ref|XP_012067058.1| PREDICTED: mediator of RNA polymerase II tra...   857   0.0  
ref|XP_010651384.1| PREDICTED: mediator of RNA polymerase II tra...   857   0.0  
gb|KDP42068.1| hypothetical protein JCGZ_01856 [Jatropha curcas]      857   0.0  
ref|XP_007028436.1| RNA polymerase II transcription mediators is...   853   0.0  
ref|XP_007028434.1| RNA polymerase II transcription mediators is...   853   0.0  
gb|KDO54455.1| hypothetical protein CISIN_1g000163mg [Citrus sin...   852   0.0  
ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II tra...   852   0.0  
ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citr...   851   0.0  
ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citr...   851   0.0  
ref|XP_010257656.1| PREDICTED: mediator of RNA polymerase II tra...   850   0.0  
ref|XP_008807938.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   840   0.0  
ref|XP_010914813.1| PREDICTED: mediator of RNA polymerase II tra...   837   0.0  
ref|XP_010914812.1| PREDICTED: mediator of RNA polymerase II tra...   837   0.0  
ref|XP_012476942.1| PREDICTED: mediator of RNA polymerase II tra...   822   0.0  
ref|XP_012476941.1| PREDICTED: mediator of RNA polymerase II tra...   822   0.0  
ref|XP_012476943.1| PREDICTED: mediator of RNA polymerase II tra...   822   0.0  
gb|KJB26886.1| hypothetical protein B456_004G264800 [Gossypium r...   822   0.0  
gb|KJB26885.1| hypothetical protein B456_004G264800 [Gossypium r...   822   0.0  
gb|KJB26883.1| hypothetical protein B456_004G264800 [Gossypium r...   822   0.0  

>ref|XP_012067059.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X2 [Jatropha curcas]
          Length = 1963

 Score =  857 bits (2215), Expect = 0.0
 Identities = 455/693 (65%), Positives = 532/693 (76%), Gaps = 9/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVLQTVIES  A+GS   +S++ER   L +HVGKALS S   DEA  SN+L 
Sbjct: 1276 VCPFPEPVAVLQTVIESSVAVGSTFLTSDRERRPILLNHVGKALSSSAVVDEASPSNILV 1335

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            LSGF++PKLVLQIVTV++IFR++ P L E VILKE AFTVYNKARRI +           
Sbjct: 1336 LSGFNVPKLVLQIVTVDAIFRVTSPGLNELVILKETAFTVYNKARRISKGSSNDIQSSTM 1395

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                     M   + IP +WKD VAPR+ G +L REG++D  LRPG WD SWQ TRTG L
Sbjct: 1396 SGRSHSV--MPQMTSIPAMWKDCVAPRLGGPALPREGDIDASLRPGTWDNSWQ-TRTGGL 1452

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            N +PNR GDY   +D+ Y FEPLFIL+EPGS+E+   PA+  N  ++S  S+  +DDSSG
Sbjct: 1453 NYDPNRNGDYFLQDDIRYLFEPLFILSEPGSLENATAPAVFGNLTAES--SKMLSDDSSG 1510

Query: 1492 VYM-HGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSR 1319
             +M + S   S DT   S LDGSE D  G S+QKT  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1511 GFMQNASSAVSADTGSSSQLDGSEPDGFGGSYQKTLPSLHCCYGWTEDWRWLVCIWTDAR 1570

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLDSHI+PFGGISSRQDTKGLQCLFVQVL QGCQIL  CSS D+  IKPRD VITRIG
Sbjct: 1571 GELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDIGAIKPRDFVITRIG 1630

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ-DMSLIQERTMP 968
             FFELE  EWQKAIYSVGG+E+KKWPLQLRRS+PDG+P SSNG SLQQ +MSL+QERT+P
Sbjct: 1631 NFFELEYLEWQKAIYSVGGSEMKKWPLQLRRSIPDGMPGSSNGASLQQQEMSLMQERTLP 1690

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K S FMKG LGQ++ RKQL+ G + +D+SRG+ QWVQSIS + ++IDH
Sbjct: 1691 SSPSP-LYSPHSKGSGFMKGGLGQSSGRKQLIGGHTVVDNSRGMLQWVQSISFVAISIDH 1749

Query: 790  TLHLLFPADMLSQ-GAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+F AD  S  GAQGG GVG S YLEGF+PVKSLG T A+YI+IPSPS+R+      
Sbjct: 1750 SLHLVFQADSQSPAGAQGGIGVGASGYLEGFTPVKSLGSTSASYIVIPSPSLRFLPPTPL 1809

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPL+TGFVVSKAVPS+ KD   ++++EWPSVLSVSL+
Sbjct: 1810 QLPTCLTAESPPLAHLLHSKGSAIPLATGFVVSKAVPSMGKDYRSNSREEWPSVLSVSLI 1869

Query: 436  DYYGGGNNSNVEKMARG-SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYL 260
            DYY GGN+   EK+ RG  KQGR  +SE RD E+EIH ILES++AE+HALSWMTVSPAYL
Sbjct: 1870 DYY-GGNSITQEKIPRGIMKQGRI-SSEVRDFEIEIHLILESISAELHALSWMTVSPAYL 1927

Query: 259  DRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            DRRTALPFHCDM+LRLRRLL+FADKE   Q DK
Sbjct: 1928 DRRTALPFHCDMVLRLRRLLHFADKELSSQPDK 1960


>ref|XP_012067058.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X1 [Jatropha curcas]
          Length = 1977

 Score =  857 bits (2215), Expect = 0.0
 Identities = 455/693 (65%), Positives = 532/693 (76%), Gaps = 9/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVLQTVIES  A+GS   +S++ER   L +HVGKALS S   DEA  SN+L 
Sbjct: 1290 VCPFPEPVAVLQTVIESSVAVGSTFLTSDRERRPILLNHVGKALSSSAVVDEASPSNILV 1349

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            LSGF++PKLVLQIVTV++IFR++ P L E VILKE AFTVYNKARRI +           
Sbjct: 1350 LSGFNVPKLVLQIVTVDAIFRVTSPGLNELVILKETAFTVYNKARRISKGSSNDIQSSTM 1409

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                     M   + IP +WKD VAPR+ G +L REG++D  LRPG WD SWQ TRTG L
Sbjct: 1410 SGRSHSV--MPQMTSIPAMWKDCVAPRLGGPALPREGDIDASLRPGTWDNSWQ-TRTGGL 1466

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            N +PNR GDY   +D+ Y FEPLFIL+EPGS+E+   PA+  N  ++S  S+  +DDSSG
Sbjct: 1467 NYDPNRNGDYFLQDDIRYLFEPLFILSEPGSLENATAPAVFGNLTAES--SKMLSDDSSG 1524

Query: 1492 VYM-HGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSR 1319
             +M + S   S DT   S LDGSE D  G S+QKT  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1525 GFMQNASSAVSADTGSSSQLDGSEPDGFGGSYQKTLPSLHCCYGWTEDWRWLVCIWTDAR 1584

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLDSHI+PFGGISSRQDTKGLQCLFVQVL QGCQIL  CSS D+  IKPRD VITRIG
Sbjct: 1585 GELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDIGAIKPRDFVITRIG 1644

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ-DMSLIQERTMP 968
             FFELE  EWQKAIYSVGG+E+KKWPLQLRRS+PDG+P SSNG SLQQ +MSL+QERT+P
Sbjct: 1645 NFFELEYLEWQKAIYSVGGSEMKKWPLQLRRSIPDGMPGSSNGASLQQQEMSLMQERTLP 1704

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K S FMKG LGQ++ RKQL+ G + +D+SRG+ QWVQSIS + ++IDH
Sbjct: 1705 SSPSP-LYSPHSKGSGFMKGGLGQSSGRKQLIGGHTVVDNSRGMLQWVQSISFVAISIDH 1763

Query: 790  TLHLLFPADMLSQ-GAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+F AD  S  GAQGG GVG S YLEGF+PVKSLG T A+YI+IPSPS+R+      
Sbjct: 1764 SLHLVFQADSQSPAGAQGGIGVGASGYLEGFTPVKSLGSTSASYIVIPSPSLRFLPPTPL 1823

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPL+TGFVVSKAVPS+ KD   ++++EWPSVLSVSL+
Sbjct: 1824 QLPTCLTAESPPLAHLLHSKGSAIPLATGFVVSKAVPSMGKDYRSNSREEWPSVLSVSLI 1883

Query: 436  DYYGGGNNSNVEKMARG-SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYL 260
            DYY GGN+   EK+ RG  KQGR  +SE RD E+EIH ILES++AE+HALSWMTVSPAYL
Sbjct: 1884 DYY-GGNSITQEKIPRGIMKQGRI-SSEVRDFEIEIHLILESISAELHALSWMTVSPAYL 1941

Query: 259  DRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            DRRTALPFHCDM+LRLRRLL+FADKE   Q DK
Sbjct: 1942 DRRTALPFHCDMVLRLRRLLHFADKELSSQPDK 1974


>ref|XP_010651384.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            [Vitis vinifera]
          Length = 1987

 Score =  857 bits (2215), Expect = 0.0
 Identities = 454/695 (65%), Positives = 532/695 (76%), Gaps = 11/695 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP A+L+TVIE+  A+GS   SS+KER S LQS VGKALSC  A DEA MSN+L 
Sbjct: 1295 VCPFPEPIALLRTVIETSVAVGSVILSSDKERRSILQSQVGKALSCPAAVDEASMSNILT 1354

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            LSGFSIPKLV+QIVTV++IFR++ P L E  ILKE AFTVYNKARRI R           
Sbjct: 1355 LSGFSIPKLVIQIVTVDAIFRVTSPALNELAILKETAFTVYNKARRISRGSSSDIQSSSL 1414

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                     M M S   G+WKD V PR+ G SLSREGELD GLR G WD SWQ  RTG L
Sbjct: 1415 SGRSHSAM-MQMASPTSGMWKDCVGPRITGPSLSREGELDAGLRSGTWDNSWQTARTGGL 1473

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ + ++V Y FEPLFILAEPGS+EHGV+     N  S+S  +   +DD SG
Sbjct: 1474 SCDPNRNGDFLFQDEVRYMFEPLFILAEPGSLEHGVSATAFGNLGSESLKT--LSDDGSG 1531

Query: 1492 VYMHG-SVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSR 1319
             +M   S   S DT P S LDGSESD  G+ HQK   SLHCCYGWTEDWRWLVCIWTDSR
Sbjct: 1532 GFMQSASSAGSIDTGPGSQLDGSESDGFGSGHQKNLPSLHCCYGWTEDWRWLVCIWTDSR 1591

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLDSHI+PFGGISSRQDTKGLQCLFVQ+L QG QIL  CSS D   +KPRD+VITRIG
Sbjct: 1592 GELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGSQILQACSSPDTGIVKPRDLVITRIG 1651

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ-DMSLIQERTMP 968
             F+ELECQEWQKAIYSVGG+EV+KWPLQLR++ PDG+  SSNG+SLQQ +MS+IQER +P
Sbjct: 1652 SFYELECQEWQKAIYSVGGSEVRKWPLQLRQAAPDGMSGSSNGSSLQQQEMSMIQERNLP 1711

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTG-QSTMDSSRGLFQWVQSISLIGVAID 794
            SSP+P LYSPH K+S +MKG LGQ  +RKQL+ G  S +DSSRGL QWVQSI+ + V+ID
Sbjct: 1712 SSPSP-LYSPHSKASGYMKGGLGQPAARKQLMGGGHSLVDSSRGLLQWVQSITFVAVSID 1770

Query: 793  HTLHLLFPADMLSQGA-QGGG-VGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXX 620
            H+L L+F AD  + GA QGGG +G S YLEGF+P+KSLG T A+YILIPSPS+R+     
Sbjct: 1771 HSLSLVFQADSSTPGATQGGGTMGPSGYLEGFTPIKSLGSTTASYILIPSPSLRFLPPTP 1830

Query: 619  XXXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSL 440
                   TAESPPLAHLLHSKGSAIPLSTGFV+SKAVP++RK+   + K+EWPSV+SVSL
Sbjct: 1831 LQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVISKAVPAMRKEFRSNAKEEWPSVISVSL 1890

Query: 439  VDYYGGGNNSNVEKMARG-SKQ-GRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPA 266
            +DYY GGNN   +K+ RG +KQ GRS +SE RD E+E H ILE+VAAE+HALSWMTVSPA
Sbjct: 1891 IDYY-GGNNITQDKVVRGLTKQGGRSISSEARDFEIETHLILETVAAELHALSWMTVSPA 1949

Query: 265  YLDRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            YL+RRTALPFHCDM+LRLRRLL+FADKE  +  +K
Sbjct: 1950 YLERRTALPFHCDMVLRLRRLLHFADKELSRTPEK 1984


>gb|KDP42068.1| hypothetical protein JCGZ_01856 [Jatropha curcas]
          Length = 1818

 Score =  857 bits (2215), Expect = 0.0
 Identities = 455/693 (65%), Positives = 532/693 (76%), Gaps = 9/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVLQTVIES  A+GS   +S++ER   L +HVGKALS S   DEA  SN+L 
Sbjct: 1131 VCPFPEPVAVLQTVIESSVAVGSTFLTSDRERRPILLNHVGKALSSSAVVDEASPSNILV 1190

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            LSGF++PKLVLQIVTV++IFR++ P L E VILKE AFTVYNKARRI +           
Sbjct: 1191 LSGFNVPKLVLQIVTVDAIFRVTSPGLNELVILKETAFTVYNKARRISKGSSNDIQSSTM 1250

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                     M   + IP +WKD VAPR+ G +L REG++D  LRPG WD SWQ TRTG L
Sbjct: 1251 SGRSHSV--MPQMTSIPAMWKDCVAPRLGGPALPREGDIDASLRPGTWDNSWQ-TRTGGL 1307

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            N +PNR GDY   +D+ Y FEPLFIL+EPGS+E+   PA+  N  ++S  S+  +DDSSG
Sbjct: 1308 NYDPNRNGDYFLQDDIRYLFEPLFILSEPGSLENATAPAVFGNLTAES--SKMLSDDSSG 1365

Query: 1492 VYM-HGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSR 1319
             +M + S   S DT   S LDGSE D  G S+QKT  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1366 GFMQNASSAVSADTGSSSQLDGSEPDGFGGSYQKTLPSLHCCYGWTEDWRWLVCIWTDAR 1425

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLDSHI+PFGGISSRQDTKGLQCLFVQVL QGCQIL  CSS D+  IKPRD VITRIG
Sbjct: 1426 GELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDIGAIKPRDFVITRIG 1485

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ-DMSLIQERTMP 968
             FFELE  EWQKAIYSVGG+E+KKWPLQLRRS+PDG+P SSNG SLQQ +MSL+QERT+P
Sbjct: 1486 NFFELEYLEWQKAIYSVGGSEMKKWPLQLRRSIPDGMPGSSNGASLQQQEMSLMQERTLP 1545

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K S FMKG LGQ++ RKQL+ G + +D+SRG+ QWVQSIS + ++IDH
Sbjct: 1546 SSPSP-LYSPHSKGSGFMKGGLGQSSGRKQLIGGHTVVDNSRGMLQWVQSISFVAISIDH 1604

Query: 790  TLHLLFPADMLSQ-GAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+F AD  S  GAQGG GVG S YLEGF+PVKSLG T A+YI+IPSPS+R+      
Sbjct: 1605 SLHLVFQADSQSPAGAQGGIGVGASGYLEGFTPVKSLGSTSASYIVIPSPSLRFLPPTPL 1664

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPL+TGFVVSKAVPS+ KD   ++++EWPSVLSVSL+
Sbjct: 1665 QLPTCLTAESPPLAHLLHSKGSAIPLATGFVVSKAVPSMGKDYRSNSREEWPSVLSVSLI 1724

Query: 436  DYYGGGNNSNVEKMARG-SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYL 260
            DYY GGN+   EK+ RG  KQGR  +SE RD E+EIH ILES++AE+HALSWMTVSPAYL
Sbjct: 1725 DYY-GGNSITQEKIPRGIMKQGRI-SSEVRDFEIEIHLILESISAELHALSWMTVSPAYL 1782

Query: 259  DRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            DRRTALPFHCDM+LRLRRLL+FADKE   Q DK
Sbjct: 1783 DRRTALPFHCDMVLRLRRLLHFADKELSSQPDK 1815


>ref|XP_007028436.1| RNA polymerase II transcription mediators isoform 3 [Theobroma cacao]
            gi|508717041|gb|EOY08938.1| RNA polymerase II
            transcription mediators isoform 3 [Theobroma cacao]
          Length = 1605

 Score =  853 bits (2204), Expect = 0.0
 Identities = 445/691 (64%), Positives = 523/691 (75%), Gaps = 7/691 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TV+ES  A+GS    S++ER S L S VGKALS S AADEA +SN+  
Sbjct: 917  VCPFPEPTAVLKTVVESSIAIGSIILPSDRERRSVLYSQVGKALSSSAAADEASISNIPV 976

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PKLVLQIVTV++IFR++ P   E VILKE AFT+YNKARRI R           
Sbjct: 977  VSGFSVPKLVLQIVTVDAIFRVTSPPFNELVILKETAFTIYNKARRISRGSTNDVSLSSS 1036

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IPG+WKD V  R+ GSSL REGE+D  LR GAWD SWQ +R G L
Sbjct: 1037 LSSRPHSVLTPMTS-IPGMWKDCVGSRIPGSSLPREGEIDSSLRGGAWDNSWQTSRAGGL 1095

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++VCY FEPLFILAE GSVEHG++P    N+ S++  S+  +D+SSG
Sbjct: 1096 SCDPNRNGDFFYQDEVCYMFEPLFILAESGSVEHGISPTAFGNSTSET--SKTVSDESSG 1153

Query: 1492 VYMH-GSVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSRG 1316
             +M   +   S D    S LDGSESD + + + KT SLHCCYGWTEDWRWLVCIWTD+RG
Sbjct: 1154 AFMQTANSAGSIDPGSGSQLDGSESDGVSSGNNKTPSLHCCYGWTEDWRWLVCIWTDARG 1213

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIGC 1142
            ELLD  I+PFGGISSRQDTKGLQCLFVQVL QGCQIL  C+S D   +KPRD VITRIG 
Sbjct: 1214 ELLDCDIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQTCASPDTGVVKPRDFVITRIGN 1273

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMPS 965
            F+ELE  EWQKAIY VGG+EVKKWPLQLRRSVPDG+P+S+NGTSL QQ+MSLIQ+RT+PS
Sbjct: 1274 FYELEYLEWQKAIYLVGGSEVKKWPLQLRRSVPDGMPTSTNGTSLQQQEMSLIQDRTLPS 1333

Query: 964  SPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHTL 785
            SP+P LYSPH K+ FMKG LGQ  +RKQL+ G + +DS RGL QWVQSIS + V++DH+L
Sbjct: 1334 SPSP-LYSPHTKAGFMKGGLGQPAARKQLMGGHTLVDSCRGLLQWVQSISFVSVSVDHSL 1392

Query: 784  HLLFPADMLSQGAQG-GGVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXXX 608
             L+F AD LS G QG  G+G S Y EGF+PVKSLG T A+Y+LIPSPSMR+         
Sbjct: 1393 QLVFQADSLSPGTQGVSGMGQSGYTEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLQLP 1452

Query: 607  XXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDYY 428
               TAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKD    TKDEWPSVLSVSL+DY 
Sbjct: 1453 ICLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDCRNYTKDEWPSVLSVSLIDYC 1512

Query: 427  GGGNNSNVEKMARG--SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLDR 254
             GGNN + +K+ RG     GR+  SE RD E++ H IL+SVAAE+HALSWMTVSP YL+R
Sbjct: 1513 -GGNNVSQDKVIRGIAKPAGRTLISEARDFEIDNHLILKSVAAELHALSWMTVSPGYLER 1571

Query: 253  RTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RTALPFHCDM+LRLRRLL+FA+KE  +  DK
Sbjct: 1572 RTALPFHCDMVLRLRRLLHFAEKELSRPPDK 1602


>ref|XP_007028434.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|508717039|gb|EOY08936.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 1985

 Score =  853 bits (2204), Expect = 0.0
 Identities = 445/691 (64%), Positives = 523/691 (75%), Gaps = 7/691 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TV+ES  A+GS    S++ER S L S VGKALS S AADEA +SN+  
Sbjct: 1297 VCPFPEPTAVLKTVVESSIAIGSIILPSDRERRSVLYSQVGKALSSSAAADEASISNIPV 1356

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PKLVLQIVTV++IFR++ P   E VILKE AFT+YNKARRI R           
Sbjct: 1357 VSGFSVPKLVLQIVTVDAIFRVTSPPFNELVILKETAFTIYNKARRISRGSTNDVSLSSS 1416

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IPG+WKD V  R+ GSSL REGE+D  LR GAWD SWQ +R G L
Sbjct: 1417 LSSRPHSVLTPMTS-IPGMWKDCVGSRIPGSSLPREGEIDSSLRGGAWDNSWQTSRAGGL 1475

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++VCY FEPLFILAE GSVEHG++P    N+ S++  S+  +D+SSG
Sbjct: 1476 SCDPNRNGDFFYQDEVCYMFEPLFILAESGSVEHGISPTAFGNSTSET--SKTVSDESSG 1533

Query: 1492 VYMH-GSVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSRG 1316
             +M   +   S D    S LDGSESD + + + KT SLHCCYGWTEDWRWLVCIWTD+RG
Sbjct: 1534 AFMQTANSAGSIDPGSGSQLDGSESDGVSSGNNKTPSLHCCYGWTEDWRWLVCIWTDARG 1593

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIGC 1142
            ELLD  I+PFGGISSRQDTKGLQCLFVQVL QGCQIL  C+S D   +KPRD VITRIG 
Sbjct: 1594 ELLDCDIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQTCASPDTGVVKPRDFVITRIGN 1653

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMPS 965
            F+ELE  EWQKAIY VGG+EVKKWPLQLRRSVPDG+P+S+NGTSL QQ+MSLIQ+RT+PS
Sbjct: 1654 FYELEYLEWQKAIYLVGGSEVKKWPLQLRRSVPDGMPTSTNGTSLQQQEMSLIQDRTLPS 1713

Query: 964  SPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHTL 785
            SP+P LYSPH K+ FMKG LGQ  +RKQL+ G + +DS RGL QWVQSIS + V++DH+L
Sbjct: 1714 SPSP-LYSPHTKAGFMKGGLGQPAARKQLMGGHTLVDSCRGLLQWVQSISFVSVSVDHSL 1772

Query: 784  HLLFPADMLSQGAQG-GGVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXXX 608
             L+F AD LS G QG  G+G S Y EGF+PVKSLG T A+Y+LIPSPSMR+         
Sbjct: 1773 QLVFQADSLSPGTQGVSGMGQSGYTEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLQLP 1832

Query: 607  XXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDYY 428
               TAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKD    TKDEWPSVLSVSL+DY 
Sbjct: 1833 ICLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDCRNYTKDEWPSVLSVSLIDYC 1892

Query: 427  GGGNNSNVEKMARG--SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLDR 254
             GGNN + +K+ RG     GR+  SE RD E++ H IL+SVAAE+HALSWMTVSP YL+R
Sbjct: 1893 -GGNNVSQDKVIRGIAKPAGRTLISEARDFEIDNHLILKSVAAELHALSWMTVSPGYLER 1951

Query: 253  RTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RTALPFHCDM+LRLRRLL+FA+KE  +  DK
Sbjct: 1952 RTALPFHCDMVLRLRRLLHFAEKELSRPPDK 1982


>gb|KDO54455.1| hypothetical protein CISIN_1g000163mg [Citrus sinensis]
          Length = 1986

 Score =  852 bits (2200), Expect = 0.0
 Identities = 446/693 (64%), Positives = 522/693 (75%), Gaps = 10/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP A+LQTVIES A+LGS A SS++ER + L S VGKALSC  A DE  +SNVLA
Sbjct: 1302 VCPFPEPLAILQTVIESSASLGSVAISSDRER-ALLHSQVGKALSCPAAVDETSISNVLA 1360

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFSIPKLVLQI+TV+ IFR++ P + E V+LKE AFTVYNKARRI R           
Sbjct: 1361 ISGFSIPKLVLQILTVDEIFRVTSPAINELVLLKETAFTVYNKARRISRGSSGDVVHSSS 1420

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       M S IPG+WKD V  RM G SLSREGE+D  LRPG WD SWQATR+G L
Sbjct: 1421 LSSRSHSVMNQMAS-IPGMWKDCVGSRMTGPSLSREGEIDASLRPGTWDNSWQATRSGGL 1479

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            NC+PNR GD+   +++ + FEPLF+LAEPGS++HGV+     N+ SD        D + G
Sbjct: 1480 NCDPNRNGDFLIQDEIRFMFEPLFVLAEPGSLDHGVSSTFNGNSTSD--------DSTGG 1531

Query: 1492 VYMHGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSRG 1316
              M GS   S DT   S LD SE D  G+ H K+  SLHCCYGWTEDWRWLVCIWTD+RG
Sbjct: 1532 FMMSGSTAGSADTGSSSQLDRSEQDGFGSGHHKSVPSLHCCYGWTEDWRWLVCIWTDARG 1591

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIGC 1142
            ELLDSHI+PFGGISSRQDTKGLQCLFVQ+L QGCQIL  C S D    KPRD VITRIG 
Sbjct: 1592 ELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGCQILQTCCSPDSGVAKPRDFVITRIGS 1651

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ--DMSLIQERTMP 968
            F+ELE  EWQKAIYSVGG+E+K+WPLQLRRSVPDG+PSS+NG SLQQ  ++SLIQER +P
Sbjct: 1652 FYELEYLEWQKAIYSVGGSEMKQWPLQLRRSVPDGMPSSTNGASLQQQQEISLIQERALP 1711

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K+S FMKG LGQ   RKQL+ G + +D+SRGL QWVQSIS + ++IDH
Sbjct: 1712 SSPSP-LYSPHSKASGFMKGGLGQPVGRKQLIGGHTMVDNSRGLLQWVQSISFVAISIDH 1770

Query: 790  TLHLLFPADMLSQGA-QGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+  AD  S G  QGG GVG S YLEGF+PVKSLG TPA+YILIPSPSMR+      
Sbjct: 1771 SLHLVHQADSPSSGGTQGGNGVGPSGYLEGFTPVKSLGATPASYILIPSPSMRFLPPAPL 1830

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPLSTGFVVSK+VPS+RKD     KDEWPSVLSV+L+
Sbjct: 1831 QLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSMRKDHKNKLKDEWPSVLSVNLI 1890

Query: 436  DYYGGGNNSNVEKMARG--SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAY 263
            DYY GGNN + +K+ R    + GR+ +SE +D E+E H ILES+A+E+HALSWMT SPAY
Sbjct: 1891 DYY-GGNNISQDKVTRVIIKQGGRTASSEPKDFEVETHLILESIASELHALSWMTASPAY 1949

Query: 262  LDRRTALPFHCDMLLRLRRLLYFADKEFHQQSD 164
            L+RRTALPFHCDM+LRLRRLL+FAD+E  QQ+D
Sbjct: 1950 LNRRTALPFHCDMVLRLRRLLHFADRELSQQAD 1982


>ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Citrus sinensis]
          Length = 1966

 Score =  852 bits (2200), Expect = 0.0
 Identities = 446/693 (64%), Positives = 522/693 (75%), Gaps = 10/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP A+LQTVIES A+LGS A SS++ER + L S VGKALSC  A DE  +SNVLA
Sbjct: 1282 VCPFPEPLAILQTVIESSASLGSVAISSDRER-ALLHSQVGKALSCPAAVDETSISNVLA 1340

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFSIPKLVLQI+TV+ IFR++ P + E V+LKE AFTVYNKARRI R           
Sbjct: 1341 ISGFSIPKLVLQILTVDEIFRVTSPAINELVLLKETAFTVYNKARRISRGSSGDVVHSSS 1400

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       M S IPG+WKD V  RM G SLSREGE+D  LRPG WD SWQATR+G L
Sbjct: 1401 LSSRSHSVMNQMAS-IPGMWKDCVGSRMTGPSLSREGEIDASLRPGTWDNSWQATRSGGL 1459

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            NC+PNR GD+   +++ + FEPLF+LAEPGS++HGV+     N+ SD        D + G
Sbjct: 1460 NCDPNRNGDFLIQDEIRFMFEPLFVLAEPGSLDHGVSSTFNGNSTSD--------DSTGG 1511

Query: 1492 VYMHGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSRG 1316
              M GS   S DT   S LD SE D  G+ H K+  SLHCCYGWTEDWRWLVCIWTD+RG
Sbjct: 1512 FMMSGSTAGSADTGSSSQLDRSEQDGFGSGHHKSVPSLHCCYGWTEDWRWLVCIWTDARG 1571

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIGC 1142
            ELLDSHI+PFGGISSRQDTKGLQCLFVQ+L QGCQIL  C S D    KPRD VITRIG 
Sbjct: 1572 ELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGCQILQTCCSPDSGVAKPRDFVITRIGS 1631

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ--DMSLIQERTMP 968
            F+ELE  EWQKAIYSVGG+E+K+WPLQLRRSVPDG+PSS+NG SLQQ  ++SLIQER +P
Sbjct: 1632 FYELEYLEWQKAIYSVGGSEMKQWPLQLRRSVPDGMPSSTNGASLQQQQEISLIQERALP 1691

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K+S FMKG LGQ   RKQL+ G + +D+SRGL QWVQSIS + ++IDH
Sbjct: 1692 SSPSP-LYSPHSKASGFMKGGLGQPVGRKQLIGGHTMVDNSRGLLQWVQSISFVAISIDH 1750

Query: 790  TLHLLFPADMLSQGA-QGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+  AD  S G  QGG GVG S YLEGF+PVKSLG TPA+YILIPSPSMR+      
Sbjct: 1751 SLHLVHQADSPSSGGTQGGNGVGPSGYLEGFTPVKSLGATPASYILIPSPSMRFLPPAPL 1810

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPLSTGFVVSK+VPS+RKD     KDEWPSVLSV+L+
Sbjct: 1811 QLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSMRKDHKNKLKDEWPSVLSVNLI 1870

Query: 436  DYYGGGNNSNVEKMARG--SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAY 263
            DYY GGNN + +K+ R    + GR+ +SE +D E+E H ILES+A+E+HALSWMT SPAY
Sbjct: 1871 DYY-GGNNISQDKVTRVIIKQGGRTASSEPKDFEVETHLILESIASELHALSWMTASPAY 1929

Query: 262  LDRRTALPFHCDMLLRLRRLLYFADKEFHQQSD 164
            L+RRTALPFHCDM+LRLRRLL+FAD+E  QQ+D
Sbjct: 1930 LNRRTALPFHCDMVLRLRRLLHFADRELSQQAD 1962


>ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
            gi|557548201|gb|ESR58830.1| hypothetical protein
            CICLE_v10014014mg [Citrus clementina]
          Length = 1967

 Score =  851 bits (2198), Expect = 0.0
 Identities = 446/693 (64%), Positives = 521/693 (75%), Gaps = 10/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP A+LQTVIES A+LGS A SS++ER + L S VGKALSC  A DE  +SNVLA
Sbjct: 1283 VCPFPEPLAILQTVIESSASLGSVAISSDRER-ALLHSQVGKALSCPAAVDETSISNVLA 1341

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFSIPKLVLQI+TV+ IFR++ P + E V+LKE AFTVYNKARRI R           
Sbjct: 1342 ISGFSIPKLVLQILTVDEIFRVTSPAINELVLLKETAFTVYNKARRISRGSSGDVVHSSS 1401

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       M S IPG+WKD V  RM G SLSREGE+D  LRPG WD SWQATR+G L
Sbjct: 1402 LSSRSHSVMNQMAS-IPGMWKDCVGSRMTGPSLSREGEIDASLRPGTWDNSWQATRSGGL 1460

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            NC+PNR GD+   +++ + FEPLF+LAEPGS +HGV+     N+ SD        D + G
Sbjct: 1461 NCDPNRNGDFLIQDEIRFMFEPLFVLAEPGSFDHGVSSTFNGNSTSD--------DSTGG 1512

Query: 1492 VYMHGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSRG 1316
              M GS   S DT   S LD SE D  G+ H K+  SLHCCYGWTEDWRWLVCIWTD+RG
Sbjct: 1513 FMMSGSTAGSADTGSSSQLDRSEQDGFGSGHHKSVPSLHCCYGWTEDWRWLVCIWTDARG 1572

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIGC 1142
            ELLDSHI+PFGGISSRQDTKGLQCLFVQ+L QGCQIL  C S D    KPRD VITRIG 
Sbjct: 1573 ELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGCQILQTCCSPDSGVAKPRDFVITRIGS 1632

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ--DMSLIQERTMP 968
            F+ELE  EWQKAIYSVGG+E+K+WPLQLRRSVPDG+PSS+NG SLQQ  ++SLIQER +P
Sbjct: 1633 FYELEYLEWQKAIYSVGGSEMKQWPLQLRRSVPDGMPSSTNGASLQQQQEISLIQERALP 1692

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K+S FMKG LGQ   RKQL+ G + +D+SRGL QWVQSIS + ++IDH
Sbjct: 1693 SSPSP-LYSPHSKASGFMKGGLGQPVGRKQLIGGHTMVDNSRGLLQWVQSISFVAISIDH 1751

Query: 790  TLHLLFPADMLSQGA-QGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+  AD  S G  QGG GVG S YLEGF+PVKSLG TPA+YILIPSPSMR+      
Sbjct: 1752 SLHLVHQADSPSSGGTQGGNGVGPSGYLEGFTPVKSLGATPASYILIPSPSMRFLPPAPL 1811

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPLSTGFVVSK+VPS+RKD     KDEWPSVLSV+L+
Sbjct: 1812 QLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSMRKDHKNKLKDEWPSVLSVNLI 1871

Query: 436  DYYGGGNNSNVEKMARG--SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAY 263
            DYY GGNN + +K+ R    + GR+ +SE +D E+E H ILES+A+E+HALSWMT SPAY
Sbjct: 1872 DYY-GGNNISQDKVTRVIIKQGGRTASSEPKDFEVETHLILESIASELHALSWMTASPAY 1930

Query: 262  LDRRTALPFHCDMLLRLRRLLYFADKEFHQQSD 164
            L+RRTALPFHCDM+LRLRRLL+FAD+E  QQ+D
Sbjct: 1931 LNRRTALPFHCDMVLRLRRLLHFADRELSQQAD 1963


>ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
            gi|557548200|gb|ESR58829.1| hypothetical protein
            CICLE_v10014014mg [Citrus clementina]
          Length = 1742

 Score =  851 bits (2198), Expect = 0.0
 Identities = 446/693 (64%), Positives = 521/693 (75%), Gaps = 10/693 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP A+LQTVIES A+LGS A SS++ER + L S VGKALSC  A DE  +SNVLA
Sbjct: 1058 VCPFPEPLAILQTVIESSASLGSVAISSDRER-ALLHSQVGKALSCPAAVDETSISNVLA 1116

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFSIPKLVLQI+TV+ IFR++ P + E V+LKE AFTVYNKARRI R           
Sbjct: 1117 ISGFSIPKLVLQILTVDEIFRVTSPAINELVLLKETAFTVYNKARRISRGSSGDVVHSSS 1176

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       M S IPG+WKD V  RM G SLSREGE+D  LRPG WD SWQATR+G L
Sbjct: 1177 LSSRSHSVMNQMAS-IPGMWKDCVGSRMTGPSLSREGEIDASLRPGTWDNSWQATRSGGL 1235

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            NC+PNR GD+   +++ + FEPLF+LAEPGS +HGV+     N+ SD        D + G
Sbjct: 1236 NCDPNRNGDFLIQDEIRFMFEPLFVLAEPGSFDHGVSSTFNGNSTSD--------DSTGG 1287

Query: 1492 VYMHGSVGSSTDTSPISLLDGSESDSIGASHQKTT-SLHCCYGWTEDWRWLVCIWTDSRG 1316
              M GS   S DT   S LD SE D  G+ H K+  SLHCCYGWTEDWRWLVCIWTD+RG
Sbjct: 1288 FMMSGSTAGSADTGSSSQLDRSEQDGFGSGHHKSVPSLHCCYGWTEDWRWLVCIWTDARG 1347

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIGC 1142
            ELLDSHI+PFGGISSRQDTKGLQCLFVQ+L QGCQIL  C S D    KPRD VITRIG 
Sbjct: 1348 ELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGCQILQTCCSPDSGVAKPRDFVITRIGS 1407

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ--DMSLIQERTMP 968
            F+ELE  EWQKAIYSVGG+E+K+WPLQLRRSVPDG+PSS+NG SLQQ  ++SLIQER +P
Sbjct: 1408 FYELEYLEWQKAIYSVGGSEMKQWPLQLRRSVPDGMPSSTNGASLQQQQEISLIQERALP 1467

Query: 967  SSPNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDH 791
            SSP+P LYSPH K+S FMKG LGQ   RKQL+ G + +D+SRGL QWVQSIS + ++IDH
Sbjct: 1468 SSPSP-LYSPHSKASGFMKGGLGQPVGRKQLIGGHTMVDNSRGLLQWVQSISFVAISIDH 1526

Query: 790  TLHLLFPADMLSQGA-QGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXX 617
            +LHL+  AD  S G  QGG GVG S YLEGF+PVKSLG TPA+YILIPSPSMR+      
Sbjct: 1527 SLHLVHQADSPSSGGTQGGNGVGPSGYLEGFTPVKSLGATPASYILIPSPSMRFLPPAPL 1586

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  TAESPPLAHLLHSKGSAIPLSTGFVVSK+VPS+RKD     KDEWPSVLSV+L+
Sbjct: 1587 QLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSMRKDHKNKLKDEWPSVLSVNLI 1646

Query: 436  DYYGGGNNSNVEKMARG--SKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAY 263
            DYY GGNN + +K+ R    + GR+ +SE +D E+E H ILES+A+E+HALSWMT SPAY
Sbjct: 1647 DYY-GGNNISQDKVTRVIIKQGGRTASSEPKDFEVETHLILESIASELHALSWMTASPAY 1705

Query: 262  LDRRTALPFHCDMLLRLRRLLYFADKEFHQQSD 164
            L+RRTALPFHCDM+LRLRRLL+FAD+E  QQ+D
Sbjct: 1706 LNRRTALPFHCDMVLRLRRLLHFADRELSQQAD 1738


>ref|XP_010257656.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            [Nelumbo nucifera]
          Length = 1972

 Score =  850 bits (2196), Expect = 0.0
 Identities = 445/690 (64%), Positives = 525/690 (76%), Gaps = 7/690 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCP+ EP AVLQTV+ES AA+GS   +S+KER S L + VGKALSCSTA DEA  SNV  
Sbjct: 1286 VCPYPEPIAVLQTVVESSAAIGSIIHASDKERRSMLHTQVGKALSCSTAVDEASTSNVPT 1345

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFSIPKLVLQI+TV++IFR++ P L E V+LKEIAFTVYNKARRI R           
Sbjct: 1346 ISGFSIPKLVLQIITVDAIFRVTSPALHELVLLKEIAFTVYNKARRISRVSCSDLGQSLG 1405

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                   + MH+ S +PG+WKDSV  R+ G SLSR+ ELD GLRPG WD SWQ +RTG +
Sbjct: 1406 ISGRPQSTLMHIASPVPGMWKDSVT-RITGPSLSRDNELDSGLRPGTWDNSWQTSRTGGI 1464

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            NC+PNR+GD    +D  Y FEPLFILAEPGSVEHG++P +  +   +S  SRPA+D+  G
Sbjct: 1465 NCDPNRSGDILLQDDTRYLFEPLFILAEPGSVEHGISPTMSGSVALES--SRPADDNGGG 1522

Query: 1492 VYMHGSVG-SSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSRG 1316
             +M  +    S D  P SLLDGS+   +G+S+QK  SLHCCYGWTEDWRWL+ IWTDSRG
Sbjct: 1523 SFMQNTSSLGSADIGPGSLLDGSDLGVLGSSYQKAPSLHCCYGWTEDWRWLISIWTDSRG 1582

Query: 1315 ELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL-CSSSDVDTIKPRDIVITRIGCF 1139
            ELLD+HI+PFGGISSRQDTKGLQCLFVQVL QGCQIL CS  ++   K RDIVITRIGCF
Sbjct: 1583 ELLDNHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILSCSPPEIAPAKTRDIVITRIGCF 1642

Query: 1138 FELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMPSS 962
            +ELECQEWQKAIY+VGGNEVKKW LQLR SV DG+P SSNGT+L QQ+M LIQER +PSS
Sbjct: 1643 YELECQEWQKAIYTVGGNEVKKW-LQLRGSVSDGIPGSSNGTTLQQQEMGLIQERALPSS 1701

Query: 961  PNPSLYSPHPKSS-FMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHTL 785
            P+PSLYSPH KSS F+KG + Q ++RKQL+ GQ+T+DSSRGLFQWVQSISLIGV +DH+L
Sbjct: 1702 PSPSLYSPHTKSSGFIKGGIVQNSTRKQLMGGQTTVDSSRGLFQWVQSISLIGVCVDHSL 1761

Query: 784  HLLFPAD--MLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXX 614
             L F  D      G QGG G   S YLEGFS +KS+G   A+YI+ PSPSMR+       
Sbjct: 1762 QLAFQPDAPFPGGGTQGGSGNAPSVYLEGFSSIKSVGSVSASYIITPSPSMRFLLPMPLQ 1821

Query: 613  XXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVD 434
                 TAESPPLAHLLHSKGSAIPL TGFVVSKA  S+RKD   + K+EWPSVLSVSLVD
Sbjct: 1822 LPTCLTAESPPLAHLLHSKGSAIPLRTGFVVSKAASSIRKDSRSNAKEEWPSVLSVSLVD 1881

Query: 433  YYGGGNNSNVEKMARGSKQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLDR 254
            YYG  N +  +K+ RGS   +++  + +D ELE H ILESVAAE+H+LSWMTVSPAYL+R
Sbjct: 1882 YYGTSNIT--QKIVRGSGT-QARTIDNKDGELETHLILESVAAELHSLSWMTVSPAYLER 1938

Query: 253  RTALPFHCDMLLRLRRLLYFADKEFHQQSD 164
            RTALPFHCDMLLRLRRLL++ADKE  QQ +
Sbjct: 1939 RTALPFHCDMLLRLRRLLHYADKELTQQRE 1968


>ref|XP_008807938.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
            transcription subunit 13 [Phoenix dactylifera]
          Length = 1999

 Score =  840 bits (2171), Expect = 0.0
 Identities = 445/699 (63%), Positives = 520/699 (74%), Gaps = 15/699 (2%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVLQT+IE  +ALGS   S +KER S L SHV +AL+C+ AADEA  SNV+ 
Sbjct: 1305 VCPFPEPRAVLQTLIECASALGSVVLSPDKERRSLLHSHVARALNCTAAADEASASNVVM 1364

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIP-RXXXXXXXXXX 1856
            LSGFSIPKLVLQIVTVES+  I+RPV  E  ILK+IAFTVYNKARRIP            
Sbjct: 1365 LSGFSIPKLVLQIVTVESLLGINRPV-NELAILKDIAFTVYNKARRIPWAAPASDVLQSS 1423

Query: 1855 XXXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGV 1676
                    + MH+TS IPGLWKD  APR++G +L+RE ELD  LRPG WD SWQ +R   
Sbjct: 1424 AASGRSQSTLMHVTSPIPGLWKDCHAPRLSGPTLTREAELDSALRPGTWDNSWQPSRGAG 1483

Query: 1675 LNCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSS 1496
            L CEP R  D    +D  Y FEPLFILAEP SVEHG TP+ V  +    TSS  +  D S
Sbjct: 1484 LTCEPIRPVDLCGQDDTRYMFEPLFILAEPSSVEHG-TPSTVFGSAVSETSSLKSVIDDS 1542

Query: 1495 GVYMHGSV-GSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
            G+YM  S  G++ D    SLLDGSE DS      KT SLHCCYGWTEDWRWLVCIWTDSR
Sbjct: 1543 GMYMQSSTSGTNADIGTTSLLDGSEHDS------KTASLHCCYGWTEDWRWLVCIWTDSR 1596

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL-CSSSDVDTIKPRDIVITRIGC 1142
            GELLDS+I+PFGGISSRQDTK LQ LFVQ+L QGCQIL C S+D  T +PRDI+ITR GC
Sbjct: 1597 GELLDSYIFPFGGISSRQDTKVLQSLFVQILQQGCQILSCPSTDSSTARPRDIIITRFGC 1656

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSLQQ-DMSLIQERTMPS 965
            FFELECQEWQKAIYSVGGNEVKKWPLQLRRS+PDG+PS++NGTSLQQ ++ LIQ+R + S
Sbjct: 1657 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSMPDGIPSTTNGTSLQQQELGLIQDRNLLS 1716

Query: 964  SPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHTL 785
            SP PSLYSPH KSSF+KG L Q++++KQLL GQ+ +DS+RGL Q VQSISLIGV+IDHTL
Sbjct: 1717 SPGPSLYSPHSKSSFIKGGLAQSSTKKQLLAGQTGVDSARGLLQLVQSISLIGVSIDHTL 1776

Query: 784  HLLFPADMLSQGAQGGGVG---LSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXX 614
            HL+   D  S G          LS YLEGF+PVKSLG    + +LIPSPS+RY       
Sbjct: 1777 HLILQPDASSAGGGSQSTSSSSLSGYLEGFTPVKSLGSMQESLLLIPSPSLRYLPSTPLQ 1836

Query: 613  XXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVD 434
                 T+ESPPLAHLLHSKGSA+PL+TG+VVSKAVP++RKDP+  TK++WPS+L+VSLVD
Sbjct: 1837 LPTCLTSESPPLAHLLHSKGSAVPLATGYVVSKAVPTMRKDPTELTKEDWPSILAVSLVD 1896

Query: 433  YYGGGNNSNVEKMARGS------KQGRSQNSE--GRDHELEIHSILESVAAEVHALSWMT 278
            +YG  NNS  EKM RG+      KQGRS N E   RD E+E H +LESVAAE+H+LSWMT
Sbjct: 1897 HYGRNNNSIQEKMVRGAGNITVGKQGRSLNPEAINRDCEMETHLVLESVAAELHSLSWMT 1956

Query: 277  VSPAYLDRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
             SP YL+RRTALPFHC+MLLRLRRLL++ADKEF +  +K
Sbjct: 1957 ASPVYLERRTALPFHCEMLLRLRRLLHYADKEFSRPPEK 1995


>ref|XP_010914813.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X2 [Elaeis guineensis]
          Length = 1977

 Score =  837 bits (2162), Expect = 0.0
 Identities = 446/700 (63%), Positives = 518/700 (74%), Gaps = 16/700 (2%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVLQT+IE  +ALGS   S +KER S LQSHV +AL+C+ AADEA  SNV+ 
Sbjct: 1282 VCPFPEPRAVLQTLIECASALGSLVLSPDKERRSLLQSHVARALNCTAAADEASASNVVM 1341

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIP-RXXXXXXXXXX 1856
            LSGFSIPKLVLQIVTVES+ RI+RP   E  ILK+IAFTVYNKARRI             
Sbjct: 1342 LSGFSIPKLVLQIVTVESLLRINRPT-NEVAILKDIAFTVYNKARRIAWAAPASDMLQSS 1400

Query: 1855 XXXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGV 1676
                    + MH+TS IPGLWKD  A R+ G++L+RE ELD  LRPG WD SWQ +R   
Sbjct: 1401 AASGRSQSTLMHVTSPIPGLWKDCHASRLPGATLAREAELDSALRPGTWDNSWQTSRGAG 1460

Query: 1675 LNCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSS 1496
            L CEPNR  D    +D  Y FEPLFILAEP S+EHG TP+ V  +    TSS  +  D S
Sbjct: 1461 LTCEPNRPVDLCGQDDTRYMFEPLFILAEPSSIEHG-TPSTVFGSAVSETSSLKSVIDDS 1519

Query: 1495 GVYMH-GSVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
            G+YM   S G + D    SLLDGSE DS      KT  LHCCYGWTEDWRWLVCIWTDSR
Sbjct: 1520 GMYMQSSSSGVNADIGTTSLLDGSEHDS------KTAGLHCCYGWTEDWRWLVCIWTDSR 1573

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQI-LCSSSDVDTIKPRDIVITRIGC 1142
            GELLDS I+PFGGISSRQDTK LQ LFVQ+L QGCQI LCSS+D  T KPRDI+ITR GC
Sbjct: 1574 GELLDSCIFPFGGISSRQDTKVLQSLFVQILQQGCQILLCSSTDSATAKPRDIIITRFGC 1633

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMPS 965
            FFELECQEWQKAIYSVGGNEVKKWPLQLRRS+PDG+PS++NGTSL QQ++ LIQ+R + S
Sbjct: 1634 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSMPDGIPSTTNGTSLQQQELGLIQDRNLLS 1693

Query: 964  SPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHTL 785
            SP+PSLYSPH KSSF+KG L Q++++KQLL GQ+ +DS RGL QWVQSISLIGV+IDH+L
Sbjct: 1694 SPSPSLYSPHSKSSFIKGGLAQSSTKKQLLAGQTGVDSPRGLLQWVQSISLIGVSIDHSL 1753

Query: 784  HLLFPADMLSQGA---QGGGVGLSTYLEGFSPVKSL-GMTPAAYILIPSPSMRYXXXXXX 617
            HL+  ADM   G          LS YLEGF+PV+SL G     Y+LIPSPS+R+      
Sbjct: 1754 HLILQADMSFAGGGSHSSSSSSLSGYLEGFTPVRSLGGSMQEPYLLIPSPSLRHLPPTPL 1813

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  T+ESPPLAHLLHSKGSAIPL+TG+VVSKAVP++RKDP+  TK++WPS+L+VSLV
Sbjct: 1814 QLPTCLTSESPPLAHLLHSKGSAIPLATGYVVSKAVPTMRKDPAELTKEDWPSILAVSLV 1873

Query: 436  DYYGGGNNSNVEKMARGS------KQGRSQNSE--GRDHELEIHSILESVAAEVHALSWM 281
            D+YG  NNS  EKM RG+      KQGRS   E   RD E E H +LESVAAE+H+LSWM
Sbjct: 1874 DHYGRNNNSIQEKMVRGAGNITIGKQGRSLTPEVISRDCETETHLVLESVAAELHSLSWM 1933

Query: 280  TVSPAYLDRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            T SP YL+RRTALPFHCDMLLRLRRLL++ADKEF +  +K
Sbjct: 1934 TASPVYLERRTALPFHCDMLLRLRRLLHYADKEFSRPPEK 1973


>ref|XP_010914812.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X1 [Elaeis guineensis]
          Length = 2000

 Score =  837 bits (2162), Expect = 0.0
 Identities = 446/700 (63%), Positives = 518/700 (74%), Gaps = 16/700 (2%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVLQT+IE  +ALGS   S +KER S LQSHV +AL+C+ AADEA  SNV+ 
Sbjct: 1305 VCPFPEPRAVLQTLIECASALGSLVLSPDKERRSLLQSHVARALNCTAAADEASASNVVM 1364

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIP-RXXXXXXXXXX 1856
            LSGFSIPKLVLQIVTVES+ RI+RP   E  ILK+IAFTVYNKARRI             
Sbjct: 1365 LSGFSIPKLVLQIVTVESLLRINRPT-NEVAILKDIAFTVYNKARRIAWAAPASDMLQSS 1423

Query: 1855 XXXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGV 1676
                    + MH+TS IPGLWKD  A R+ G++L+RE ELD  LRPG WD SWQ +R   
Sbjct: 1424 AASGRSQSTLMHVTSPIPGLWKDCHASRLPGATLAREAELDSALRPGTWDNSWQTSRGAG 1483

Query: 1675 LNCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSS 1496
            L CEPNR  D    +D  Y FEPLFILAEP S+EHG TP+ V  +    TSS  +  D S
Sbjct: 1484 LTCEPNRPVDLCGQDDTRYMFEPLFILAEPSSIEHG-TPSTVFGSAVSETSSLKSVIDDS 1542

Query: 1495 GVYMH-GSVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
            G+YM   S G + D    SLLDGSE DS      KT  LHCCYGWTEDWRWLVCIWTDSR
Sbjct: 1543 GMYMQSSSSGVNADIGTTSLLDGSEHDS------KTAGLHCCYGWTEDWRWLVCIWTDSR 1596

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQI-LCSSSDVDTIKPRDIVITRIGC 1142
            GELLDS I+PFGGISSRQDTK LQ LFVQ+L QGCQI LCSS+D  T KPRDI+ITR GC
Sbjct: 1597 GELLDSCIFPFGGISSRQDTKVLQSLFVQILQQGCQILLCSSTDSATAKPRDIIITRFGC 1656

Query: 1141 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMPS 965
            FFELECQEWQKAIYSVGGNEVKKWPLQLRRS+PDG+PS++NGTSL QQ++ LIQ+R + S
Sbjct: 1657 FFELECQEWQKAIYSVGGNEVKKWPLQLRRSMPDGIPSTTNGTSLQQQELGLIQDRNLLS 1716

Query: 964  SPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHTL 785
            SP+PSLYSPH KSSF+KG L Q++++KQLL GQ+ +DS RGL QWVQSISLIGV+IDH+L
Sbjct: 1717 SPSPSLYSPHSKSSFIKGGLAQSSTKKQLLAGQTGVDSPRGLLQWVQSISLIGVSIDHSL 1776

Query: 784  HLLFPADMLSQGA---QGGGVGLSTYLEGFSPVKSL-GMTPAAYILIPSPSMRYXXXXXX 617
            HL+  ADM   G          LS YLEGF+PV+SL G     Y+LIPSPS+R+      
Sbjct: 1777 HLILQADMSFAGGGSHSSSSSSLSGYLEGFTPVRSLGGSMQEPYLLIPSPSLRHLPPTPL 1836

Query: 616  XXXXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLV 437
                  T+ESPPLAHLLHSKGSAIPL+TG+VVSKAVP++RKDP+  TK++WPS+L+VSLV
Sbjct: 1837 QLPTCLTSESPPLAHLLHSKGSAIPLATGYVVSKAVPTMRKDPAELTKEDWPSILAVSLV 1896

Query: 436  DYYGGGNNSNVEKMARGS------KQGRSQNSE--GRDHELEIHSILESVAAEVHALSWM 281
            D+YG  NNS  EKM RG+      KQGRS   E   RD E E H +LESVAAE+H+LSWM
Sbjct: 1897 DHYGRNNNSIQEKMVRGAGNITIGKQGRSLTPEVISRDCETETHLVLESVAAELHSLSWM 1956

Query: 280  TVSPAYLDRRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            T SP YL+RRTALPFHCDMLLRLRRLL++ADKEF +  +K
Sbjct: 1957 TASPVYLERRTALPFHCDMLLRLRRLLHYADKEFSRPPEK 1996


>ref|XP_012476942.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X2 [Gossypium raimondii]
          Length = 1970

 Score =  822 bits (2122), Expect = 0.0
 Identities = 435/692 (62%), Positives = 525/692 (75%), Gaps = 8/692 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TVIES  A+GS    S++++ S L S +GKALS S AADEA +SN+  
Sbjct: 1284 VCPFPEPTAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSSAAADEASVSNIPV 1343

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PK+V+QIVTV++IFR++ P   E +ILKE+AFTVYNKARRI R           
Sbjct: 1344 VSGFSVPKVVVQIVTVDAIFRVTSPPFNELIILKEMAFTVYNKARRISRGSMNDLALSSS 1403

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IP +WKDSV  R+ GSS+ REGE+D  LR GAW+ SWQ TRTG L
Sbjct: 1404 LSRSHSVL-TPMTS-IPTMWKDSVGSRIPGSSIPREGEIDSSLRGGAWENSWQ-TRTGGL 1460

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++V Y FEPLFILAE GS+EHGV+P    N+ S++  S+  +D+S G
Sbjct: 1461 SCDPNRNGDFFYPDEVRYMFEPLFILAESGSLEHGVSPTAFGNSTSET--SKIVSDESGG 1518

Query: 1492 VYMHG--SVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
             +M    SVGS TD    S   G E D + +S+QK  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1519 GFMQAANSVGS-TDPGSGSQHVGLEPDGLDSSNQKIPSLHCCYGWTEDWRWLVCIWTDAR 1577

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLD +I+PFGGISSRQDTKGLQCLFVQVL QGC IL  C+SSD   +KPRD VITRIG
Sbjct: 1578 GELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCHILQACTSSDTGVVKPRDFVITRIG 1637

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMP 968
             F+ELE  EWQKAIYSVGG+EVKKWPLQLRRSVPDG+P+++NGTSL QQ+MSLIQERT+P
Sbjct: 1638 SFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPANTNGTSLDQQEMSLIQERTLP 1697

Query: 967  SSPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHT 788
            SSP+P LYS H K+SFMKG LGQ  +RKQLL+GQ+ +D+SRGL QWVQSIS + V++DH+
Sbjct: 1698 SSPSP-LYSSHTKASFMKGGLGQPAARKQLLSGQTLVDNSRGLLQWVQSISFVSVSVDHS 1756

Query: 787  LHLLFPADMLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXX 611
            LHL+  AD  S G   G G G S+Y+EGF+PVKSLG T A+Y+LIPSPSMR+        
Sbjct: 1757 LHLVLQADSPSSGTHSGTGPGQSSYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLHL 1816

Query: 610  XXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDY 431
                TAESPPLAHLLHSKG AIPLSTGFVVSKAVPS+RKD     K+EWPSVLS+SL+DY
Sbjct: 1817 PTCLTAESPPLAHLLHSKGFAIPLSTGFVVSKAVPSMRKDYRNHPKEEWPSVLSISLIDY 1876

Query: 430  YGGGNNSNVEKMARGS--KQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLD 257
            Y GGN    +K+ RG+  + GR+ +SE RD E++ H IL S+AAE+HALSWMTVSP +LD
Sbjct: 1877 Y-GGNKVTQDKVIRGTAKQAGRTPSSESRDSEIDNHLILASIAAELHALSWMTVSPGFLD 1935

Query: 256  RRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RRTALPFH DM+LRLRRLL+FA+KE   Q DK
Sbjct: 1936 RRTALPFHTDMVLRLRRLLHFAEKELSGQPDK 1967


>ref|XP_012476941.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X1 [Gossypium raimondii]
          Length = 1973

 Score =  822 bits (2122), Expect = 0.0
 Identities = 435/692 (62%), Positives = 525/692 (75%), Gaps = 8/692 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TVIES  A+GS    S++++ S L S +GKALS S AADEA +SN+  
Sbjct: 1287 VCPFPEPTAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSSAAADEASVSNIPV 1346

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PK+V+QIVTV++IFR++ P   E +ILKE+AFTVYNKARRI R           
Sbjct: 1347 VSGFSVPKVVVQIVTVDAIFRVTSPPFNELIILKEMAFTVYNKARRISRGSMNDLALSSS 1406

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IP +WKDSV  R+ GSS+ REGE+D  LR GAW+ SWQ TRTG L
Sbjct: 1407 LSRSHSVL-TPMTS-IPTMWKDSVGSRIPGSSIPREGEIDSSLRGGAWENSWQ-TRTGGL 1463

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++V Y FEPLFILAE GS+EHGV+P    N+ S++  S+  +D+S G
Sbjct: 1464 SCDPNRNGDFFYPDEVRYMFEPLFILAESGSLEHGVSPTAFGNSTSET--SKIVSDESGG 1521

Query: 1492 VYMHG--SVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
             +M    SVGS TD    S   G E D + +S+QK  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1522 GFMQAANSVGS-TDPGSGSQHVGLEPDGLDSSNQKIPSLHCCYGWTEDWRWLVCIWTDAR 1580

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLD +I+PFGGISSRQDTKGLQCLFVQVL QGC IL  C+SSD   +KPRD VITRIG
Sbjct: 1581 GELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCHILQACTSSDTGVVKPRDFVITRIG 1640

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMP 968
             F+ELE  EWQKAIYSVGG+EVKKWPLQLRRSVPDG+P+++NGTSL QQ+MSLIQERT+P
Sbjct: 1641 SFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPANTNGTSLDQQEMSLIQERTLP 1700

Query: 967  SSPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHT 788
            SSP+P LYS H K+SFMKG LGQ  +RKQLL+GQ+ +D+SRGL QWVQSIS + V++DH+
Sbjct: 1701 SSPSP-LYSSHTKASFMKGGLGQPAARKQLLSGQTLVDNSRGLLQWVQSISFVSVSVDHS 1759

Query: 787  LHLLFPADMLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXX 611
            LHL+  AD  S G   G G G S+Y+EGF+PVKSLG T A+Y+LIPSPSMR+        
Sbjct: 1760 LHLVLQADSPSSGTHSGTGPGQSSYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLHL 1819

Query: 610  XXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDY 431
                TAESPPLAHLLHSKG AIPLSTGFVVSKAVPS+RKD     K+EWPSVLS+SL+DY
Sbjct: 1820 PTCLTAESPPLAHLLHSKGFAIPLSTGFVVSKAVPSMRKDYRNHPKEEWPSVLSISLIDY 1879

Query: 430  YGGGNNSNVEKMARGS--KQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLD 257
            Y GGN    +K+ RG+  + GR+ +SE RD E++ H IL S+AAE+HALSWMTVSP +LD
Sbjct: 1880 Y-GGNKVTQDKVIRGTAKQAGRTPSSESRDSEIDNHLILASIAAELHALSWMTVSPGFLD 1938

Query: 256  RRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RRTALPFH DM+LRLRRLL+FA+KE   Q DK
Sbjct: 1939 RRTALPFHTDMVLRLRRLLHFAEKELSGQPDK 1970


>ref|XP_012476943.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X3 [Gossypium raimondii]
            gi|763759556|gb|KJB26887.1| hypothetical protein
            B456_004G264800 [Gossypium raimondii]
          Length = 1946

 Score =  822 bits (2122), Expect = 0.0
 Identities = 435/692 (62%), Positives = 525/692 (75%), Gaps = 8/692 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TVIES  A+GS    S++++ S L S +GKALS S AADEA +SN+  
Sbjct: 1260 VCPFPEPTAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSSAAADEASVSNIPV 1319

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PK+V+QIVTV++IFR++ P   E +ILKE+AFTVYNKARRI R           
Sbjct: 1320 VSGFSVPKVVVQIVTVDAIFRVTSPPFNELIILKEMAFTVYNKARRISRGSMNDLALSSS 1379

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IP +WKDSV  R+ GSS+ REGE+D  LR GAW+ SWQ TRTG L
Sbjct: 1380 LSRSHSVL-TPMTS-IPTMWKDSVGSRIPGSSIPREGEIDSSLRGGAWENSWQ-TRTGGL 1436

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++V Y FEPLFILAE GS+EHGV+P    N+ S++  S+  +D+S G
Sbjct: 1437 SCDPNRNGDFFYPDEVRYMFEPLFILAESGSLEHGVSPTAFGNSTSET--SKIVSDESGG 1494

Query: 1492 VYMHG--SVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
             +M    SVGS TD    S   G E D + +S+QK  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1495 GFMQAANSVGS-TDPGSGSQHVGLEPDGLDSSNQKIPSLHCCYGWTEDWRWLVCIWTDAR 1553

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLD +I+PFGGISSRQDTKGLQCLFVQVL QGC IL  C+SSD   +KPRD VITRIG
Sbjct: 1554 GELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCHILQACTSSDTGVVKPRDFVITRIG 1613

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMP 968
             F+ELE  EWQKAIYSVGG+EVKKWPLQLRRSVPDG+P+++NGTSL QQ+MSLIQERT+P
Sbjct: 1614 SFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPANTNGTSLDQQEMSLIQERTLP 1673

Query: 967  SSPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHT 788
            SSP+P LYS H K+SFMKG LGQ  +RKQLL+GQ+ +D+SRGL QWVQSIS + V++DH+
Sbjct: 1674 SSPSP-LYSSHTKASFMKGGLGQPAARKQLLSGQTLVDNSRGLLQWVQSISFVSVSVDHS 1732

Query: 787  LHLLFPADMLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXX 611
            LHL+  AD  S G   G G G S+Y+EGF+PVKSLG T A+Y+LIPSPSMR+        
Sbjct: 1733 LHLVLQADSPSSGTHSGTGPGQSSYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLHL 1792

Query: 610  XXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDY 431
                TAESPPLAHLLHSKG AIPLSTGFVVSKAVPS+RKD     K+EWPSVLS+SL+DY
Sbjct: 1793 PTCLTAESPPLAHLLHSKGFAIPLSTGFVVSKAVPSMRKDYRNHPKEEWPSVLSISLIDY 1852

Query: 430  YGGGNNSNVEKMARGS--KQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLD 257
            Y GGN    +K+ RG+  + GR+ +SE RD E++ H IL S+AAE+HALSWMTVSP +LD
Sbjct: 1853 Y-GGNKVTQDKVIRGTAKQAGRTPSSESRDSEIDNHLILASIAAELHALSWMTVSPGFLD 1911

Query: 256  RRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RRTALPFH DM+LRLRRLL+FA+KE   Q DK
Sbjct: 1912 RRTALPFHTDMVLRLRRLLHFAEKELSGQPDK 1943


>gb|KJB26886.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
          Length = 1943

 Score =  822 bits (2122), Expect = 0.0
 Identities = 435/692 (62%), Positives = 525/692 (75%), Gaps = 8/692 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TVIES  A+GS    S++++ S L S +GKALS S AADEA +SN+  
Sbjct: 1257 VCPFPEPTAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSSAAADEASVSNIPV 1316

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PK+V+QIVTV++IFR++ P   E +ILKE+AFTVYNKARRI R           
Sbjct: 1317 VSGFSVPKVVVQIVTVDAIFRVTSPPFNELIILKEMAFTVYNKARRISRGSMNDLALSSS 1376

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IP +WKDSV  R+ GSS+ REGE+D  LR GAW+ SWQ TRTG L
Sbjct: 1377 LSRSHSVL-TPMTS-IPTMWKDSVGSRIPGSSIPREGEIDSSLRGGAWENSWQ-TRTGGL 1433

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++V Y FEPLFILAE GS+EHGV+P    N+ S++  S+  +D+S G
Sbjct: 1434 SCDPNRNGDFFYPDEVRYMFEPLFILAESGSLEHGVSPTAFGNSTSET--SKIVSDESGG 1491

Query: 1492 VYMHG--SVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
             +M    SVGS TD    S   G E D + +S+QK  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1492 GFMQAANSVGS-TDPGSGSQHVGLEPDGLDSSNQKIPSLHCCYGWTEDWRWLVCIWTDAR 1550

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLD +I+PFGGISSRQDTKGLQCLFVQVL QGC IL  C+SSD   +KPRD VITRIG
Sbjct: 1551 GELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCHILQACTSSDTGVVKPRDFVITRIG 1610

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMP 968
             F+ELE  EWQKAIYSVGG+EVKKWPLQLRRSVPDG+P+++NGTSL QQ+MSLIQERT+P
Sbjct: 1611 SFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPANTNGTSLDQQEMSLIQERTLP 1670

Query: 967  SSPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHT 788
            SSP+P LYS H K+SFMKG LGQ  +RKQLL+GQ+ +D+SRGL QWVQSIS + V++DH+
Sbjct: 1671 SSPSP-LYSSHTKASFMKGGLGQPAARKQLLSGQTLVDNSRGLLQWVQSISFVSVSVDHS 1729

Query: 787  LHLLFPADMLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXX 611
            LHL+  AD  S G   G G G S+Y+EGF+PVKSLG T A+Y+LIPSPSMR+        
Sbjct: 1730 LHLVLQADSPSSGTHSGTGPGQSSYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLHL 1789

Query: 610  XXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDY 431
                TAESPPLAHLLHSKG AIPLSTGFVVSKAVPS+RKD     K+EWPSVLS+SL+DY
Sbjct: 1790 PTCLTAESPPLAHLLHSKGFAIPLSTGFVVSKAVPSMRKDYRNHPKEEWPSVLSISLIDY 1849

Query: 430  YGGGNNSNVEKMARGS--KQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLD 257
            Y GGN    +K+ RG+  + GR+ +SE RD E++ H IL S+AAE+HALSWMTVSP +LD
Sbjct: 1850 Y-GGNKVTQDKVIRGTAKQAGRTPSSESRDSEIDNHLILASIAAELHALSWMTVSPGFLD 1908

Query: 256  RRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RRTALPFH DM+LRLRRLL+FA+KE   Q DK
Sbjct: 1909 RRTALPFHTDMVLRLRRLLHFAEKELSGQPDK 1940


>gb|KJB26885.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
          Length = 1801

 Score =  822 bits (2122), Expect = 0.0
 Identities = 435/692 (62%), Positives = 525/692 (75%), Gaps = 8/692 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TVIES  A+GS    S++++ S L S +GKALS S AADEA +SN+  
Sbjct: 1115 VCPFPEPTAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSSAAADEASVSNIPV 1174

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PK+V+QIVTV++IFR++ P   E +ILKE+AFTVYNKARRI R           
Sbjct: 1175 VSGFSVPKVVVQIVTVDAIFRVTSPPFNELIILKEMAFTVYNKARRISRGSMNDLALSSS 1234

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IP +WKDSV  R+ GSS+ REGE+D  LR GAW+ SWQ TRTG L
Sbjct: 1235 LSRSHSVL-TPMTS-IPTMWKDSVGSRIPGSSIPREGEIDSSLRGGAWENSWQ-TRTGGL 1291

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++V Y FEPLFILAE GS+EHGV+P    N+ S++  S+  +D+S G
Sbjct: 1292 SCDPNRNGDFFYPDEVRYMFEPLFILAESGSLEHGVSPTAFGNSTSET--SKIVSDESGG 1349

Query: 1492 VYMHG--SVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
             +M    SVGS TD    S   G E D + +S+QK  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1350 GFMQAANSVGS-TDPGSGSQHVGLEPDGLDSSNQKIPSLHCCYGWTEDWRWLVCIWTDAR 1408

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLD +I+PFGGISSRQDTKGLQCLFVQVL QGC IL  C+SSD   +KPRD VITRIG
Sbjct: 1409 GELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCHILQACTSSDTGVVKPRDFVITRIG 1468

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMP 968
             F+ELE  EWQKAIYSVGG+EVKKWPLQLRRSVPDG+P+++NGTSL QQ+MSLIQERT+P
Sbjct: 1469 SFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPANTNGTSLDQQEMSLIQERTLP 1528

Query: 967  SSPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHT 788
            SSP+P LYS H K+SFMKG LGQ  +RKQLL+GQ+ +D+SRGL QWVQSIS + V++DH+
Sbjct: 1529 SSPSP-LYSSHTKASFMKGGLGQPAARKQLLSGQTLVDNSRGLLQWVQSISFVSVSVDHS 1587

Query: 787  LHLLFPADMLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXX 611
            LHL+  AD  S G   G G G S+Y+EGF+PVKSLG T A+Y+LIPSPSMR+        
Sbjct: 1588 LHLVLQADSPSSGTHSGTGPGQSSYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLHL 1647

Query: 610  XXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDY 431
                TAESPPLAHLLHSKG AIPLSTGFVVSKAVPS+RKD     K+EWPSVLS+SL+DY
Sbjct: 1648 PTCLTAESPPLAHLLHSKGFAIPLSTGFVVSKAVPSMRKDYRNHPKEEWPSVLSISLIDY 1707

Query: 430  YGGGNNSNVEKMARGS--KQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLD 257
            Y GGN    +K+ RG+  + GR+ +SE RD E++ H IL S+AAE+HALSWMTVSP +LD
Sbjct: 1708 Y-GGNKVTQDKVIRGTAKQAGRTPSSESRDSEIDNHLILASIAAELHALSWMTVSPGFLD 1766

Query: 256  RRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RRTALPFH DM+LRLRRLL+FA+KE   Q DK
Sbjct: 1767 RRTALPFHTDMVLRLRRLLHFAEKELSGQPDK 1798


>gb|KJB26883.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
            gi|763759553|gb|KJB26884.1| hypothetical protein
            B456_004G264800 [Gossypium raimondii]
          Length = 1505

 Score =  822 bits (2122), Expect = 0.0
 Identities = 435/692 (62%), Positives = 525/692 (75%), Gaps = 8/692 (1%)
 Frame = -1

Query: 2212 VCPFLEPAAVLQTVIESCAALGSNAFSSNKERISFLQSHVGKALSCSTAADEALMSNVLA 2033
            VCPF EP AVL+TVIES  A+GS    S++++ S L S +GKALS S AADEA +SN+  
Sbjct: 819  VCPFPEPTAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSSAAADEASVSNIPV 878

Query: 2032 LSGFSIPKLVLQIVTVESIFRISRPVLTEPVILKEIAFTVYNKARRIPRXXXXXXXXXXX 1853
            +SGFS+PK+V+QIVTV++IFR++ P   E +ILKE+AFTVYNKARRI R           
Sbjct: 879  VSGFSVPKVVVQIVTVDAIFRVTSPPFNELIILKEMAFTVYNKARRISRGSMNDLALSSS 938

Query: 1852 XXXXXXXSYMHMTSHIPGLWKDSVAPRMAGSSLSREGELDVGLRPGAWDGSWQATRTGVL 1673
                       MTS IP +WKDSV  R+ GSS+ REGE+D  LR GAW+ SWQ TRTG L
Sbjct: 939  LSRSHSVL-TPMTS-IPTMWKDSVGSRIPGSSIPREGEIDSSLRGGAWENSWQ-TRTGGL 995

Query: 1672 NCEPNRTGDYSYHNDVCYSFEPLFILAEPGSVEHGVTPALVINTISDSTSSRPANDDSSG 1493
            +C+PNR GD+ Y ++V Y FEPLFILAE GS+EHGV+P    N+ S++  S+  +D+S G
Sbjct: 996  SCDPNRNGDFFYPDEVRYMFEPLFILAESGSLEHGVSPTAFGNSTSET--SKIVSDESGG 1053

Query: 1492 VYMHG--SVGSSTDTSPISLLDGSESDSIGASHQKTTSLHCCYGWTEDWRWLVCIWTDSR 1319
             +M    SVGS TD    S   G E D + +S+QK  SLHCCYGWTEDWRWLVCIWTD+R
Sbjct: 1054 GFMQAANSVGS-TDPGSGSQHVGLEPDGLDSSNQKIPSLHCCYGWTEDWRWLVCIWTDAR 1112

Query: 1318 GELLDSHIYPFGGISSRQDTKGLQCLFVQVLHQGCQIL--CSSSDVDTIKPRDIVITRIG 1145
            GELLD +I+PFGGISSRQDTKGLQCLFVQVL QGC IL  C+SSD   +KPRD VITRIG
Sbjct: 1113 GELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCHILQACTSSDTGVVKPRDFVITRIG 1172

Query: 1144 CFFELECQEWQKAIYSVGGNEVKKWPLQLRRSVPDGVPSSSNGTSL-QQDMSLIQERTMP 968
             F+ELE  EWQKAIYSVGG+EVKKWPLQLRRSVPDG+P+++NGTSL QQ+MSLIQERT+P
Sbjct: 1173 SFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPANTNGTSLDQQEMSLIQERTLP 1232

Query: 967  SSPNPSLYSPHPKSSFMKGSLGQTNSRKQLLTGQSTMDSSRGLFQWVQSISLIGVAIDHT 788
            SSP+P LYS H K+SFMKG LGQ  +RKQLL+GQ+ +D+SRGL QWVQSIS + V++DH+
Sbjct: 1233 SSPSP-LYSSHTKASFMKGGLGQPAARKQLLSGQTLVDNSRGLLQWVQSISFVSVSVDHS 1291

Query: 787  LHLLFPADMLSQGAQGG-GVGLSTYLEGFSPVKSLGMTPAAYILIPSPSMRYXXXXXXXX 611
            LHL+  AD  S G   G G G S+Y+EGF+PVKSLG T A+Y+LIPSPSMR+        
Sbjct: 1292 LHLVLQADSPSSGTHSGTGPGQSSYIEGFTPVKSLGSTSASYMLIPSPSMRFLPPTPLHL 1351

Query: 610  XXXXTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSVRKDPSISTKDEWPSVLSVSLVDY 431
                TAESPPLAHLLHSKG AIPLSTGFVVSKAVPS+RKD     K+EWPSVLS+SL+DY
Sbjct: 1352 PTCLTAESPPLAHLLHSKGFAIPLSTGFVVSKAVPSMRKDYRNHPKEEWPSVLSISLIDY 1411

Query: 430  YGGGNNSNVEKMARGS--KQGRSQNSEGRDHELEIHSILESVAAEVHALSWMTVSPAYLD 257
            Y GGN    +K+ RG+  + GR+ +SE RD E++ H IL S+AAE+HALSWMTVSP +LD
Sbjct: 1412 Y-GGNKVTQDKVIRGTAKQAGRTPSSESRDSEIDNHLILASIAAELHALSWMTVSPGFLD 1470

Query: 256  RRTALPFHCDMLLRLRRLLYFADKEFHQQSDK 161
            RRTALPFH DM+LRLRRLL+FA+KE   Q DK
Sbjct: 1471 RRTALPFHTDMVLRLRRLLHFAEKELSGQPDK 1502