BLASTX nr result

ID: Cinnamomum24_contig00005756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00005756
         (1091 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g...    69   8e-09
ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X...    69   8e-09
ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X...    69   8e-09
ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X...    69   8e-09
ref|XP_008341731.1| PREDICTED: DNA repair protein UVH3 [Malus do...    66   5e-08

>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
          Length = 1567

 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 72/249 (28%), Positives = 90/249 (36%), Gaps = 22/249 (8%)
 Frame = -3

Query: 1089 LMDHPSQVGSESRKKRKVRPSGTASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGT 910
            L D   Q GS SRKKR++ PS    + S+         +  N          K PRK+ T
Sbjct: 1210 LTDDRVQEGSSSRKKRRLSPSIPEGSASD---------NCSNAKIKQGRQVSKHPRKQNT 1260

Query: 909  AK---------TES----EDGHSL-------VRKAGRPKARNEPXXXXXXXXXXXXXXXX 790
                       TES    E G S        VR +G+ K R                   
Sbjct: 1261 ESKNMHPADVATESVFLDESGRSNQSGLCENVRGSGKGKGRGRGRGRGRGISEEMLNHEP 1320

Query: 789  XRDAVIHXXXXXXXXXXXXXXXEKQVHIERAKEQSELRRSARQRKQVKYTGKDVDGDSLG 610
              D                     + H E    +SE+RRS R RK VKY    ++ D L 
Sbjct: 1321 GDDTAC--------------TGASESHTEVPAAKSEVRRSKRPRKHVKYAEDVLEVDELN 1366

Query: 609  SSSNQSDENCSGTLEQEPFTDRGITSDACGPTDEN--QANEPSLEGKSSRDYLYSGGGFC 436
             SSNQ DEN    L +     +    D  G   ++         E   SRDYL  GGGFC
Sbjct: 1367 VSSNQMDEN---DLHEVAVEHKLAEEDGNGTIRDSIPDIGGSHSEDSLSRDYLLRGGGFC 1423

Query: 435  ADEDDDQSG 409
            AD  D+Q G
Sbjct: 1424 ADRSDEQGG 1432


>ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Nelumbo nucifera]
          Length = 1430

 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = -3

Query: 720  KQVHIERAKEQSELRRSARQRKQVKYTGKDVDGDSLGSSSNQSDE--NCSGTLEQEPFTD 547
            +++ +E+ +    +RRS R +KQV+Y  KD++ D LG SS ++ E      T+EQE   +
Sbjct: 1185 QEMQVEKTEGLPAVRRSTRLKKQVEYAVKDLEIDGLGESSERTREEFTTEETVEQETSAE 1244

Query: 546  RGITSD-ACGPTDENQANE--PSLEGKSSRDYLYSGGGFCADEDD 421
              +  D A G  + NQ ++  PSL+  S RDYL  GGGFC D+ +
Sbjct: 1245 ENMFGDIAHGVEERNQCDQSNPSLKDGSCRDYLEMGGGFCMDKTE 1289


>ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Nelumbo nucifera]
          Length = 1264

 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = -3

Query: 720  KQVHIERAKEQSELRRSARQRKQVKYTGKDVDGDSLGSSSNQSDE--NCSGTLEQEPFTD 547
            +++ +E+ +    +RRS R +KQV+Y  KD++ D LG SS ++ E      T+EQE   +
Sbjct: 1019 QEMQVEKTEGLPAVRRSTRLKKQVEYAVKDLEIDGLGESSERTREEFTTEETVEQETSAE 1078

Query: 546  RGITSD-ACGPTDENQANE--PSLEGKSSRDYLYSGGGFCADEDD 421
              +  D A G  + NQ ++  PSL+  S RDYL  GGGFC D+ +
Sbjct: 1079 ENMFGDIAHGVEERNQCDQSNPSLKDGSCRDYLEMGGGFCMDKTE 1123


>ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Nelumbo nucifera]
          Length = 1571

 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = -3

Query: 720  KQVHIERAKEQSELRRSARQRKQVKYTGKDVDGDSLGSSSNQSDE--NCSGTLEQEPFTD 547
            +++ +E+ +    +RRS R +KQV+Y  KD++ D LG SS ++ E      T+EQE   +
Sbjct: 1326 QEMQVEKTEGLPAVRRSTRLKKQVEYAVKDLEIDGLGESSERTREEFTTEETVEQETSAE 1385

Query: 546  RGITSD-ACGPTDENQANE--PSLEGKSSRDYLYSGGGFCADEDD 421
              +  D A G  + NQ ++  PSL+  S RDYL  GGGFC D+ +
Sbjct: 1386 ENMFGDIAHGVEERNQCDQSNPSLKDGSCRDYLEMGGGFCMDKTE 1430


>ref|XP_008341731.1| PREDICTED: DNA repair protein UVH3 [Malus domestica]
          Length = 1593

 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 86/380 (22%), Positives = 132/380 (34%), Gaps = 63/380 (16%)
 Frame = -3

Query: 1089 LMDHPSQVGSESRKKRKVRPSGTASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGT 910
            L+D  +   S SRKKR        +N SEK  +  +      ++ +  ++  KQ RK+ T
Sbjct: 1216 LVDDAAHKVSRSRKKRTTSTDEAGNNKSEKLSEGTDKSVLKKQSDSKGKSTAKQSRKRRT 1275

Query: 909  AKTESEDGHSLVRKAGRPKAR------NEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXX 748
             +  +        +AGR   R      NE                   +           
Sbjct: 1276 TEEPAPSKRPKPAEAGRSTNRKLHANGNERGRGRRVLGSGKEKVNPNFEV-----SETSS 1330

Query: 747  XXXXXXXXEKQVHIERAKEQSELRRSARQRKQVKYTGKDVDGDSLGSSSNQSDENCSG-- 574
                       +H +  +   E+RRS R RK V YT  D+D D LG   + S+  CS   
Sbjct: 1331 GNGDDDNDGMDLHTDTIEGLGEMRRSGRLRKPVNYTVDDLDVDDLGEPLDHSNAKCSNAE 1390

Query: 573  TLEQEPFTDRGITSDA--------------------------------CGPTDE------ 508
            T EQ    D G   ++                                C   DE      
Sbjct: 1391 TGEQVISRDEGKCEESASSLSEKKQQNEGNLSPNVGLHKDYLETGGGFCPVEDETGEPGL 1450

Query: 507  NQANEPSLEGKSSRDYLYSGGGFCADEDD---DQSGNPIQ---------QVPSLARAPDL 364
            +Q  +PS   + S DYL +GGGFC DE +   DQ G  +Q          +PS +   ++
Sbjct: 1451 SQHGDPSFGAEVSEDYLKTGGGFCGDESETGNDQDGIRVQTKTTASENSDLPSFSGIVNM 1510

Query: 363  FEAQRIDSPVTRSSTDAHFSVNSSTNLNEQKHENMLEQQ-----DDSSKIPQMPPPSMIE 199
             +   I S  +  +        SS   +    E  +  +     DD +K+    P + ++
Sbjct: 1511 VDLGHISSQSSIGNKRPLVGFQSSERTDAYDTEQNINHETATITDDQTKVNASLPENSVD 1570

Query: 198  ERDSCTSGAVEVGLRAMPSL 139
                 + GA    L AMP L
Sbjct: 1571 NSRQPSGGA----LSAMPFL 1586


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