BLASTX nr result

ID: Cinnamomum24_contig00005209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00005209
         (298 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010650047.1| PREDICTED: cellulose synthase-like protein G...    59   1e-06
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...    59   1e-06
ref|XP_010650022.1| PREDICTED: cellulose synthase-like protein G...    57   5e-06
emb|CBI26389.3| unnamed protein product [Vitis vinifera]               57   5e-06
emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]    57   5e-06

>ref|XP_010650047.1| PREDICTED: cellulose synthase-like protein G2 isoform X2 [Vitis
           vinifera]
          Length = 732

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = -2

Query: 294 ILNMAALIGGVGRVIVEGNYSALMVQXXXXXXXXXXXXXXIEGFAIRRDAGRVPALITFL 115
           +LNM A + G+ R IV GN+  +++Q              IEG  +R+D GR+P  +T L
Sbjct: 655 VLNMVAFMAGLARAIVFGNWEKMLIQVLLSLYILIMSYPVIEGMILRKDKGRIPYSVTLL 714

Query: 114 SIICTMVLLSLGFIV 70
           SI+  MV L+LG +V
Sbjct: 715 SIVFAMVFLTLGSVV 729


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2 isoform X1 [Vitis
           vinifera]
          Length = 733

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = -2

Query: 294 ILNMAALIGGVGRVIVEGNYSALMVQXXXXXXXXXXXXXXIEGFAIRRDAGRVPALITFL 115
           +LNM A + G+ R IV GN+  +++Q              IEG  +R+D GR+P  +T L
Sbjct: 656 VLNMVAFMAGLARAIVFGNWEKMLIQVLLSLYILIMSYPVIEGMILRKDKGRIPYSVTLL 715

Query: 114 SIICTMVLLSLGFIV 70
           SI+  MV L+LG +V
Sbjct: 716 SIVFAMVFLTLGSVV 730


>ref|XP_010650022.1| PREDICTED: cellulose synthase-like protein G2 [Vitis vinifera]
          Length = 737

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = -2

Query: 294 ILNMAALIGGVGRVIVEGNYSALMVQXXXXXXXXXXXXXXIEGFAIRRDAGRVPALITFL 115
           I NMAA + G+ RVI  GN+  + VQ              +EG  +R+D GRVP  IT L
Sbjct: 660 ISNMAAFMVGLARVIAAGNWDKMFVQVVLSFYILIMSYPIVEGMILRKDKGRVPPSITLL 719

Query: 114 SIICTMVLLSLG 79
           S +  MVLL+LG
Sbjct: 720 STVLAMVLLTLG 731


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = -2

Query: 294 ILNMAALIGGVGRVIVEGNYSALMVQXXXXXXXXXXXXXXIEGFAIRRDAGRVPALITFL 115
           I NMAA + G+ RVI  GN+  + VQ              +EG  +R+D GRVP  IT L
Sbjct: 723 ISNMAAFMVGLARVIAAGNWDKMFVQVVLSFYILIMSYPIVEGMILRKDKGRVPPSITLL 782

Query: 114 SIICTMVLLSLG 79
           S +  MVLL+LG
Sbjct: 783 STVLAMVLLTLG 794


>emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]
          Length = 643

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = -2

Query: 294 ILNMAALIGGVGRVIVEGNYSALMVQXXXXXXXXXXXXXXIEGFAIRRDAGRVPALITFL 115
           I NMAA + G+ RVI  GN+  + VQ              +EG  +R+D GRVP  IT L
Sbjct: 566 ISNMAAFMVGLARVIAAGNWDKMFVQVVLSFYILIMSYPIVEGMILRKDKGRVPPSITLL 625

Query: 114 SIICTMVLLSLG 79
           S +  MVLL+LG
Sbjct: 626 STVLAMVLLTLG 637


Top