BLASTX nr result
ID: Cinnamomum24_contig00005203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum24_contig00005203
(813 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II a... 351 3e-94
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 348 3e-93
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 345 1e-92
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ... 345 3e-92
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a... 344 4e-92
ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II a... 343 6e-92
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 343 7e-92
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 342 1e-91
ref|XP_008338853.1| PREDICTED: DNA-directed RNA polymerases II a... 341 3e-91
ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II a... 341 4e-91
ref|XP_012076737.1| PREDICTED: DNA-directed RNA polymerases II a... 340 5e-91
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 340 5e-91
ref|XP_009361609.1| PREDICTED: DNA-directed RNA polymerases II a... 340 6e-91
ref|XP_008232385.1| PREDICTED: DNA-directed RNA polymerases II a... 340 6e-91
ref|XP_009352669.1| PREDICTED: DNA-directed RNA polymerases II a... 339 1e-90
ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II a... 337 4e-90
ref|XP_012469213.1| PREDICTED: DNA-directed RNA polymerases II a... 336 1e-89
ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II a... 336 1e-89
gb|KHG28798.1| dna-directed rna polymerases i, ii, and iii subun... 335 2e-89
ref|XP_010511250.1| PREDICTED: DNA-directed RNA polymerases II a... 333 6e-89
>ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Nelumbo nucifera] gi|720057870|ref|XP_010274104.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Nelumbo nucifera]
Length = 206
Score = 351 bits (901), Expect = 3e-94
Identities = 175/200 (87%), Positives = 189/200 (94%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
ED+ RLFRIRRTV+QML DRGYLVGD EL MTRSQF+ K+GENVKREDLVINK+KR+D+
Sbjct: 5 EDEITRLFRIRRTVIQMLKDRGYLVGDFELNMTRSQFVSKYGENVKREDLVINKAKRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QIF+FFPEE KVGVKTMKTYTNRMKSENV RAILVVQQNLT FAKTCI+EI+ +FHLE
Sbjct: 65 SDQIFVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTAFAKTCINEIAAKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VLT+EEKKTLLERYTLKETQLPRIQI DPIARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQIGDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 348 bits (892), Expect = 3e-93
Identities = 166/200 (83%), Positives = 191/200 (95%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
+D+ RLFRIR+TVMQML DRGY VGD E+TMT++QFI K+GEN+KREDLVINK+KR+DN
Sbjct: 5 DDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDN 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFP+EAKVGVKTMKTYTNRMKSENV RA+LVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQE+ELLVN+KEH LVPEH+VLTNEEKKTLL+RYT+KETQLPRIQ++DPIARYYGLKRG
Sbjct: 125 VFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 345 bits (886), Expect = 1e-92
Identities = 170/200 (85%), Positives = 188/200 (94%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RLFRIR+TVMQML DRGY VGD E+ MTR QF K+G N+KREDLVINK+KR+D+
Sbjct: 5 EEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEEAKVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VL+NEEKKTLLERYT+KETQLPRIQITDPIARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 345 bits (884), Expect = 3e-92
Identities = 168/200 (84%), Positives = 187/200 (93%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
ED+ RLFRIRRTVMQML DR YLVGD EL MT+ QF +K+GEN+KREDL+INKS+R+D+
Sbjct: 5 EDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
+QI++FFPEE KVGVKTMKTY NRMKSENV RA+LVVQQNLTPFA+TCISEIS +FHLE
Sbjct: 65 PDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VLTNEEKKTLLERYT+KETQLPRIQ+TDPIARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYRY
Sbjct: 185 QVVKIIRPSETAGRYITYRY 204
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera]
Length = 206
Score = 344 bits (882), Expect = 4e-92
Identities = 166/200 (83%), Positives = 190/200 (95%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ +RLFRIR+TVMQML DRGY VGD E+ MT+ QF+ KFGEN+KREDLVINK+KR+D+
Sbjct: 5 EEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEE KVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VLT+EEKKTLLERYT+KETQLPRIQ++DPIARY+GLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYRY
Sbjct: 185 QVVKIIRPSETAGRYITYRY 204
>ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Gossypium raimondii] gi|823154631|ref|XP_012477197.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Gossypium raimondii]
gi|728836967|gb|KHG16410.1| dna-directed rna polymerases
i, ii, and iii subunit rpabc1 [Gossypium arboreum]
gi|763759819|gb|KJB27150.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
gi|763759820|gb|KJB27151.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
gi|763759821|gb|KJB27152.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
Length = 206
Score = 343 bits (881), Expect = 6e-92
Identities = 164/200 (82%), Positives = 188/200 (94%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
+D+ RLFRIR+TVMQML DRGY VGD E+ +++ QFI K+GEN+KREDLVINK+KR+DN
Sbjct: 5 DDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTKRNDN 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEEAKVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVN+KEH LVPEH+VLTNEEKKTLL RYT+KETQLPRIQ++DPIARY+GLKRG
Sbjct: 125 VFQEAELLVNVKEHALVPEHQVLTNEEKKTLLHRYTVKETQLPRIQVSDPIARYFGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYRY
Sbjct: 185 QVVKIIRPSETAGRYITYRY 204
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 343 bits (880), Expect = 7e-92
Identities = 169/200 (84%), Positives = 187/200 (93%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL RIR+TVMQML DRGY VGD E+ MTR QF K+G N+KREDLVINK+KR+D+
Sbjct: 5 EEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEEAKVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VL+NEEKKTLLERYT+KETQLPRIQITDPIARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 342 bits (878), Expect = 1e-91
Identities = 167/200 (83%), Positives = 187/200 (93%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
+++ RLFRIRRTVMQML DRGY VGD E+ M++ QFI KFGEN+KREDLVINK+ R+D+
Sbjct: 5 DEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFP+E KVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI EIS +FHLE
Sbjct: 65 SDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VLTNEEKKTLL+RYT+KETQLPRIQ+TDPIARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_008338853.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
isoform X1 [Malus domestica]
Length = 206
Score = 341 bits (875), Expect = 3e-91
Identities = 164/200 (82%), Positives = 187/200 (93%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL+R+R+TVMQML DR YLVGD E+ M++ QF DK+GEN+KREDL+INK+KR+D
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMSKEQFKDKYGENMKREDLIINKTKRTDT 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
++QI++FFP+E KVGVKTMKTYTNRMKSENV RAILV QQ+LTPFAKTCISEISG+FHLE
Sbjct: 65 NDQIYVFFPDEPKVGVKTMKTYTNRMKSENVFRAILVTQQSLTPFAKTCISEISGKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKR
Sbjct: 125 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRA 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_012080620.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Jatropha curcas] gi|802658502|ref|XP_012080621.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Jatropha curcas]
gi|643720408|gb|KDP30787.1| hypothetical protein
JCGZ_13730 [Jatropha curcas]
Length = 206
Score = 341 bits (874), Expect = 4e-91
Identities = 165/200 (82%), Positives = 188/200 (94%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
ED+ RLFRIR+TVMQML DRGYLV D+E+ MTR QFI K+GEN+KREDLVINKS+R++
Sbjct: 5 EDEIKRLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSRRNEP 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEE KVGVKTMKTYTNRMK+ENV RA+LVVQQNLTPFA+TCISEI+ +F LE
Sbjct: 65 SDQIYVFFPEEQKVGVKTMKTYTNRMKNENVYRAVLVVQQNLTPFARTCISEIASKFQLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VLTNEEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYR+
Sbjct: 185 QVVKIIRPSETAGRYITYRF 204
>ref|XP_012076737.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Jatropha curcas] gi|643724505|gb|KDP33706.1|
hypothetical protein JCGZ_07277 [Jatropha curcas]
Length = 206
Score = 340 bits (873), Expect = 5e-91
Identities = 165/200 (82%), Positives = 188/200 (94%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
ED+ +LFRIR+TVMQML DRGYLV D+E+ MTR QFI K+GEN+KREDLVINKS+R++
Sbjct: 5 EDEIKKLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSRRNEP 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI+IFFPEE KVGVKTMKTYTNRMK+ENV RAILVVQQNLTPFA+TCI+EI+ +F LE
Sbjct: 65 SDQIYIFFPEEQKVGVKTMKTYTNRMKNENVYRAILVVQQNLTPFARTCIAEIASKFQLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VLTNEEKKTLLERYT+KETQLPR+Q+TDPIARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRVQVTDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYR+
Sbjct: 185 QVVKIIRPSETAGRYITYRF 204
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 340 bits (873), Expect = 5e-91
Identities = 165/200 (82%), Positives = 184/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL+R+R+TVMQML DR YLVGD E+ MTR QF K+GEN+KREDL INK+KRSD+
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEE KVGVKTMKTYTNRMKSENV RA+LV QQNLTPFAKTCISEIS +FHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH VLT EEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYRY
Sbjct: 185 QVVKIIRPSETAGRYITYRY 204
>ref|XP_009361609.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Pyrus x bretschneideri]
gi|694365542|ref|XP_009361610.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Pyrus x bretschneideri]
gi|694418395|ref|XP_009337207.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Pyrus x bretschneideri]
gi|694418397|ref|XP_009337208.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Pyrus x bretschneideri]
gi|694418400|ref|XP_009337210.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Pyrus x bretschneideri]
gi|694418402|ref|XP_009337211.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Pyrus x bretschneideri]
Length = 206
Score = 340 bits (872), Expect = 6e-91
Identities = 164/200 (82%), Positives = 187/200 (93%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL+R+R+TVMQML DR YLVGD E+ M++ QF DK+GEN+KREDL+INK+KRSD+
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMSKEQFKDKYGENMKREDLIINKTKRSDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
++QI++FFP+E KVGVKTMKTYTNRMKSENV RAILV QQ+LTPFAKTCISEISG+FHLE
Sbjct: 65 NDQIYVFFPDEPKVGVKTMKTYTNRMKSENVFRAILVTQQSLTPFAKTCISEISGKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VF EAELLVNIKEHVLVPEHRVLTNEEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKR
Sbjct: 125 VFLEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRA 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_008232385.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Prunus mume]
Length = 206
Score = 340 bits (872), Expect = 6e-91
Identities = 164/200 (82%), Positives = 184/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL+R+R+TVMQML DR YLVGD E+ MTR QF K+GEN+KREDL INK+KRSD+
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEE KVGVKTMKTYTNRMKSENV RA+LV QQNLTPFAKTCISEIS +FHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH VLT EEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKI+RPSETAGRY+TYRY
Sbjct: 185 QVVKIVRPSETAGRYITYRY 204
>ref|XP_009352669.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Pyrus x bretschneideri]
Length = 206
Score = 339 bits (869), Expect = 1e-90
Identities = 164/200 (82%), Positives = 185/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL+R+R TVMQML DR YLVGD E+ MT+ QF DK+GEN+KREDL+INK+KRSD+
Sbjct: 5 EEEITRLYRVRNTVMQMLKDRNYLVGDFEINMTKEQFKDKYGENMKREDLIINKTKRSDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
++QI++FFP+E KVGVKTMKTYTNRMKSENV RAILV QQ+LTPFAK CISEISG+FHLE
Sbjct: 65 NDQIYVFFPDEPKVGVKTMKTYTNRMKSENVLRAILVTQQSLTPFAKACISEISGKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VF EAELLVNIKEHVLVPEHRVLTNEEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKR
Sbjct: 125 VFLEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRA 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 185 QVVKIIRPSETAGRYVTYRY 204
>ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Amborella trichopoda] gi|548863022|gb|ERN20377.1|
hypothetical protein AMTR_s00068p00034280 [Amborella
trichopoda]
Length = 206
Score = 337 bits (865), Expect = 4e-90
Identities = 163/201 (81%), Positives = 188/201 (93%)
Frame = -3
Query: 799 MEDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSD 620
M+D T++LFRIRRT+MQML DRGYLVGD E+ MT++QFI+KFG+ VK++DLVINK+ R++
Sbjct: 4 MDDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63
Query: 619 NSEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHL 440
SEQI++FFPEE KVGVKT+KTYT RMKSENV RAILV+QQNLTPFA+ C+ EIS +FHL
Sbjct: 64 PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123
Query: 439 EVFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 260
E+FQE+ELLVNIKEHVLVPEH+VLT+EEKKTLLERYTLKETQLPRIQITDPIARYYGLKR
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 259 GQVVKIIRPSETAGRYVTYRY 197
GQVVKIIRPSETAGRYVTYRY
Sbjct: 184 GQVVKIIRPSETAGRYVTYRY 204
>ref|XP_012469213.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Gossypium raimondii] gi|763739700|gb|KJB07199.1|
hypothetical protein B456_001G007200 [Gossypium
raimondii]
Length = 206
Score = 336 bits (861), Expect = 1e-89
Identities = 161/200 (80%), Positives = 185/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
+D+ RLFRIR+TV+Q+L DR Y VGD E+ M+R QFI KFGEN+KREDLVINK+KR+D+
Sbjct: 5 DDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLVINKAKRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEE KVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQE ELLVN+KEH LVPEH+VLT EEKKTLL+RYT+KETQLPRIQ++DPIARYYGLKRG
Sbjct: 125 VFQETELLVNVKEHSLVPEHQVLTTEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYRY
Sbjct: 185 QVVKIIRPSETAGRYITYRY 204
>ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis] gi|629115273|gb|KCW79948.1|
hypothetical protein EUGRSUZ_C01278 [Eucalyptus grandis]
Length = 220
Score = 336 bits (861), Expect = 1e-89
Identities = 165/200 (82%), Positives = 185/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
E++ RL RI+RTV+QML DRGYLV D EL MTR QFI+K+GEN+KREDLVINK KR+++
Sbjct: 19 EEEITRLHRIQRTVLQMLRDRGYLVTDGELNMTRFQFIEKYGENMKREDLVINKHKRNES 78
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEEAKVGVKTMKTYT RM SENV RAIL VQQNLTPFA+TCISEIS +FHLE
Sbjct: 79 SDQIYVFFPEEAKVGVKTMKTYTTRMNSENVFRAILAVQQNLTPFARTCISEISTKFHLE 138
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAELLVNIKEHVLVPEH+VL NEEKKTLL+RYT+KETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 139 VFQEAELLVNIKEHVLVPEHQVLANEEKKTLLQRYTVKETQLPRIQVTDPVARYYGLKRG 198
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 199 QVVKIIRPSETAGRYVTYRY 218
>gb|KHG28798.1| dna-directed rna polymerases i, ii, and iii subunit rpabc1
[Gossypium arboreum]
Length = 206
Score = 335 bits (860), Expect = 2e-89
Identities = 160/200 (80%), Positives = 185/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
+D+ RLFRIR+TV+Q+L DR Y VGD E+ M+R QFI KFGEN+KREDL+INK+KR+D+
Sbjct: 5 DDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLIINKAKRNDS 64
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+QI++FFPEE KVGVKTMKTYTNRMKSENV RAILVVQQNLTPFA+TCI+EIS +FHLE
Sbjct: 65 SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFHLE 124
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQE ELLVN+KEH LVPEH+VLT EEKKTLL+RYT+KETQLPRIQ++DPIARYYGLKRG
Sbjct: 125 VFQETELLVNVKEHSLVPEHQVLTTEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRG 184
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRY+TYRY
Sbjct: 185 QVVKIIRPSETAGRYITYRY 204
>ref|XP_010511250.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Camelina sativa] gi|727586940|ref|XP_010466511.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Camelina sativa]
gi|727634336|ref|XP_010488256.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Camelina sativa]
Length = 205
Score = 333 bits (855), Expect = 6e-89
Identities = 163/200 (81%), Positives = 184/200 (92%)
Frame = -3
Query: 796 EDDTNRLFRIRRTVMQMLNDRGYLVGDHELTMTRSQFIDKFGENVKREDLVINKSKRSDN 617
ED+ RL+RI +T+MQML DRGY + D ELTMT+ QFI K G+N+KREDLV K+KR+DN
Sbjct: 4 EDEIKRLYRIHKTLMQMLKDRGYFIADSELTMTKHQFIRKHGDNMKREDLVSLKAKRNDN 63
Query: 616 SEQIFIFFPEEAKVGVKTMKTYTNRMKSENVSRAILVVQQNLTPFAKTCISEISGRFHLE 437
S+Q++IFFP+EAKVGVKTMK YTNRMKSENV RAILVVQQNLTPFA+TCISEIS +FHLE
Sbjct: 64 SDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLE 123
Query: 436 VFQEAELLVNIKEHVLVPEHRVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 257
VFQEAE+LVNIKEHVLVPEH+VLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKRG
Sbjct: 124 VFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRG 183
Query: 256 QVVKIIRPSETAGRYVTYRY 197
QVVKIIRPSETAGRYVTYRY
Sbjct: 184 QVVKIIRPSETAGRYVTYRY 203