BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00005115
         (3779 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010261923.1| PREDICTED: RNA polymerase-associated protein...  1712   0.0  
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...  1660   0.0  
ref|XP_007012670.1| Binding isoform 1 [Theobroma cacao] gi|50878...  1605   0.0  
ref|XP_010047494.1| PREDICTED: RNA polymerase-associated protein...  1596   0.0  
ref|XP_012480641.1| PREDICTED: RNA polymerase-associated protein...  1593   0.0  
ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citr...  1592   0.0  
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein...  1590   0.0  
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein...  1587   0.0  
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1586   0.0  
ref|XP_008450914.1| PREDICTED: RNA polymerase-associated protein...  1584   0.0  
ref|XP_004513474.1| PREDICTED: protein CTR9 homolog [Cicer ariet...  1583   0.0  
ref|XP_011660015.1| PREDICTED: RNA polymerase-associated protein...  1582   0.0  
gb|KHN12273.1| RNA polymerase-associated protein CTR9 like [Glyc...  1578   0.0  
ref|XP_007138670.1| hypothetical protein PHAVU_009G228100g [Phas...  1578   0.0  
gb|KHG23804.1| RNA polymerase-associated CTR9 [Gossypium arboreum]   1576   0.0  
ref|XP_008242215.1| PREDICTED: RNA polymerase-associated protein...  1576   0.0  
gb|KHN06085.1| RNA polymerase-associated protein CTR9 like [Glyc...  1573   0.0  
ref|XP_006849650.1| PREDICTED: RNA polymerase-associated protein...  1570   0.0  
ref|XP_009800504.1| PREDICTED: RNA polymerase-associated protein...  1568   0.0  
ref|XP_008354456.1| PREDICTED: RNA polymerase-associated protein...  1566   0.0  

>ref|XP_010261923.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nelumbo
            nucifera]
          Length = 1095

 Score = 1712 bits (4434), Expect = 0.0
 Identities = 880/1098 (80%), Positives = 957/1098 (87%), Gaps = 9/1098 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKI+QFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EID+YYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVL+ + DNVPALLGQACVQF+RG +SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLEENSDNVPALLGQACVQFSRGRFSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+PNCPG VRLG+GLCRYKLGQFEKARQAF+RVLQLDPENVEALVALGI+
Sbjct: 181  SLELYKRALQVYPNCPGAVRLGLGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D   NEA GI+KGMEKMQ+AFEIYPYCAM+LNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLHTNEADGIRKGMEKMQQAFEIYPYCAMSLNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G MKSH+YYNLAR YH+KGDYEKAG+YYMASVKEINKP +FVLP+YGLGQVQLKLGDFRS
Sbjct: 301  GPMKSHSYYNLARSYHSKGDYEKAGMYYMASVKEINKPHEFVLPFYGLGQVQLKLGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            SLSNFEKVLEVYPENCE+LKAVGHIYVQLGQT+KALE LRKAT+IDPRDAQAFLELGELL
Sbjct: 361  SLSNFEKVLEVYPENCETLKAVGHIYVQLGQTDKALEILRKATRIDPRDAQAFLELGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSD GAAL+AF+TA  LLKKGG+EVPIELLNNIGVLHFERGEFELAEQ FK+ALGDG+W
Sbjct: 421  ISSDAGAALEAFRTARTLLKKGGEEVPIELLNNIGVLHFERGEFELAEQAFKDALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  MDG+I +S+MDS  ST QYKDM+LF +LE DGVS+ELPWDKVTT+FN ARLLEQ+HD
Sbjct: 481  LSFMDGKIFSSTMDSDVSTRQYKDMQLFQRLEVDGVSVELPWDKVTTVFNLARLLEQLHD 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            TEKA+ILYRLILFKYPDYLDAY+RLAAI K+RNNIQLSIELI +ALK+N+KC NALSMLG
Sbjct: 541  TEKASILYRLILFKYPDYLDAYMRLAAITKARNNIQLSIELITDALKINDKCSNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            NLELK DDWVKAKDTFRAA +ATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEK+
Sbjct: 601  NLELKGDDWVKAKDTFRAAREATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYTKVLVQ P NLYAANGA VVLAEKG FD++KDIFTQV EAASGS+FVQMPD+W+NL
Sbjct: 661  KELYTKVLVQRPANLYAANGAAVVLAEKGHFDVAKDIFTQVQEAASGSIFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQGHF LAVKMYQNCL++F Y+TD QVLLYLARTHYEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGHFALAVKMYQNCLRKFYYNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQKTKR+ADEVRSTVAELKNAV VFSQLSAASS H HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVCVFSQLSAASSLHFHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DE+KIETHVGYCKHLLDAAKVHCEAA         RLEVARQV+L         EQRKFQ
Sbjct: 841  DERKIETHVGYCKHLLDAAKVHCEAAEREEQQNRQRLEVARQVTLAEEARRKAEEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LE+RKQEDELKKVMQQE+ F RIKEQWK+S   P+SKRKDRS AED++            
Sbjct: 901  LEKRKQEDELKKVMQQEQHFERIKEQWKSS--TPASKRKDRSLAEDEEGGYSEKRRKGGK 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQ--------EDGG-ENAQDLL 496
                                           D  M+N+Q+        EDGG +NAQDLL
Sbjct: 959  RRKKDKSSKAHYEMEEAEAEMMDDQEEMEDEDARMMNNQEDVNEMNDLEDGGADNAQDLL 1018

Query: 495  VAAGLEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESD 316
            VAAGLEDSDAEDE APSS ++RRR+AWSESD+DE P   Q ESSP   +RENS ELPESD
Sbjct: 1019 VAAGLEDSDAEDEAAPSSTIHRRRQAWSESDDDE-PTQRQIESSP---NRENSVELPESD 1074

Query: 315  GEIRENDFRDDESDKPNR 262
             EIRE      E+DK N+
Sbjct: 1075 REIRE------ENDKTNK 1086


>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 1660 bits (4298), Expect = 0.0
 Identities = 849/1094 (77%), Positives = 944/1094 (86%), Gaps = 6/1094 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKI+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+ STWVGKGQLLLAKG++EQA AAFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SL+LYKRALQV+P+CP  VR+GIGLC YKLGQFEKAR+AF+RVLQLDPENVEALVALGI+
Sbjct: 181  SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D   N+A GI+KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAGLYYMASVKE NKP DFVLPYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            SLSNFEKVLEVYPENCE+LKA+GHIYVQLGQTEKA E LRKATKIDPRDAQAFL+LGELL
Sbjct: 361  SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I+SDTGAALDAFKTA GLLKKGG+EVPIELLNNIGVL+FERGEFELAEQ FKEA+GDG+W
Sbjct: 421  ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  +D +  + + D+R S   +KDM+LFHQLEEDG  +ELPW+KVT LFN ARLLEQ+++
Sbjct: 481  LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            T+ A+ILYRLILFK+PDY+DAYLRLAAIAK+RNNIQLSIEL+G+ALKVN+K PN+L MLG
Sbjct: 541  TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+TFR+A DATDGKDSYATLSLGNWNYFAA+RSEKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VLVQH  NLYAANGAGVVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 661  KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F Y+TD+QVLLYLARTHYEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQKTKR+ADEVRSTVAELKNAVR+FSQLSAAS+ H HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKIETHVGYCKHLL+AAKVHCEAA         R+E+ARQV+L         EQRKFQ
Sbjct: 841  DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDD------XXXXXX 667
            LERRKQEDELK+VMQQE+ F R+KEQWK++    +SKRK+RSQ +DD+            
Sbjct: 901  LERRKQEDELKRVMQQEQHFERVKEQWKSN--NLNSKRKERSQIDDDEGGQSERRRRKGG 958

Query: 666  XXXXXXXXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQEDGGENAQDLLVAA 487
                                                   N +N+Q +DG ++AQDLL AA
Sbjct: 959  KRRKKDKSRYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAAA 1018

Query: 486  GLEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEI 307
            GLEDSDAED+ A  S+ NRR+RAWSESDEDE P+  + ESSP    RENSAE+ ESDGEI
Sbjct: 1019 GLEDSDAEDDMAGPSSGNRRKRAWSESDEDE-PQDQRPESSPV---RENSAEVQESDGEI 1074

Query: 306  RENDFRDDESDKPN 265
            +      D++DKPN
Sbjct: 1075 K------DDNDKPN 1082


>ref|XP_007012670.1| Binding isoform 1 [Theobroma cacao] gi|508783033|gb|EOY30289.1|
            Binding isoform 1 [Theobroma cacao]
          Length = 1094

 Score = 1605 bits (4155), Expect = 0.0
 Identities = 819/1087 (75%), Positives = 914/1087 (84%), Gaps = 9/1087 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKIEQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQA AAFKIVL+GDRDNVPALLGQACV+FNR  YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFAAFKIVLEGDRDNVPALLGQACVEFNRSRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQVFPNCPG VRLGIGLCRYKLGQFEKAR AF+RVLQLD ENVEALVAL I+
Sbjct: 181  SLELYKRALQVFPNCPGAVRLGIGLCRYKLGQFEKARLAFQRVLQLDSENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D QANEA GIQKGM+KM+RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLQANEASGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAG YYMAS+KEINKP +FV PYYGLGQV+LK GDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGFYYMASIKEINKPHEFVFPYYGLGQVKLKSGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQ EKA E +RKA KIDPRDAQAFL+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVEKAQEFMRKAIKIDPRDAQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSDTGAALDAFKTA  L++KGG  VPIE+LNNIGVLHFER EFELA +   +ALGDG+W
Sbjct: 421  ISSDTGAALDAFKTARSLMEKGGQAVPIEVLNNIGVLHFEREEFELALESLNKALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L +   + ++  +++  S   YKDM+LFH+LEEDG+ +ELPW+KVT +FN ARL EQ+H+
Sbjct: 481  LILTGNKPKSYVIEASASILDYKDMQLFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHN 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            T  ANILY LILFKYPDY+DAYLRLAAIAK+R+N+QLSIEL+  ALKVN+KCPNALSMLG
Sbjct: 541  TGTANILYHLILFKYPDYVDAYLRLAAIAKARSNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+TFR+A DATDGKDSYA LSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYAILSLGNWNYFAAIRNEKRAPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VLVQH  NLYAANGAGVVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 661  KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHV+FAQG+F LAVKMYQNCL++F Y+TD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLA
Sbjct: 721  AHVFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFS STLQK KR+ADEVRSTVAEL+NAVR+FSQLSAAS+ H+HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI THV YCKHLL AAKVH EAA         + E ARQ++L         EQRK+ 
Sbjct: 841  DEKKINTHVEYCKHLLVAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKYL 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LERRKQEDE K++ Q EE F R++EQWK+S   P+SKR++RS+ +D+D            
Sbjct: 901  LERRKQEDEQKRLQQAEEHFKRVQEQWKSS--TPASKRRERSEVDDEDGGHSEKRRKGGK 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDG-------NMINDQQEDGGENAQDLLVA 490
                                                      +NDQ +D GENAQDLL A
Sbjct: 959  RRKKDKNKSRYERDDEEPYMMDDREELGDEDANMNYEESTTQMNDQDDDNGENAQDLLAA 1018

Query: 489  AGLEDSDAEDE--TAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESD 316
            AGLEDSD EDE   APSSA  RRRRAWSESD+DE P     ESSP    RENSAEL ESD
Sbjct: 1019 AGLEDSDVEDEAAAAPSSAAGRRRRAWSESDDDE-PLHRGTESSPV---RENSAELQESD 1074

Query: 315  GEIREND 295
            GEIRE++
Sbjct: 1075 GEIREDN 1081


>ref|XP_010047494.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Eucalyptus
            grandis] gi|629114751|gb|KCW79426.1| hypothetical protein
            EUGRSUZ_C00824 [Eucalyptus grandis]
          Length = 1088

 Score = 1596 bits (4133), Expect = 0.0
 Identities = 809/1093 (74%), Positives = 914/1093 (83%), Gaps = 8/1093 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKI+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLL KGE+EQA AAFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLGKGEIEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRAL V P+CPG VRLGIGLCRYKLGQFEKARQAF RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALIVHPDCPGAVRLGIGLCRYKLGQFEKARQAFLRVLQLDPENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + N+  GI++G+EKM RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV  H
Sbjct: 241  DMRTNKVGGIRRGVEKMHRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAGLYYMASVKEINKP  F+ PYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHAFIFPYYGLGQVQLKLGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            SLSNFEKVLEVYP+NCE+L+ +GHIYVQLGQ EK  E +RKATK+DPRDAQAFL+LGELL
Sbjct: 361  SLSNFEKVLEVYPDNCETLRVLGHIYVQLGQVEKGQEFMRKATKVDPRDAQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSDTGAALDAFKTA  LLKKGG EVP+ELLNNIGV+HFERGE ELAEQ  KEA+GDG+W
Sbjct: 421  ISSDTGAALDAFKTARSLLKKGGQEVPVELLNNIGVIHFERGELELAEQSLKEAVGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
               ++G++  S+ D+   T  YKDM++F QLE D V+LELPW+KVT LFN ARLLEQ+H 
Sbjct: 481  RSFIEGKVNVSTADATACTRLYKDMQIFTQLEADNVNLELPWNKVTALFNLARLLEQLHR 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
             E A+ILYRLI++KYPDY+DAYLRLAAI+K++NNIQLSIEL+ +ALKVNEKCPNALSMLG
Sbjct: 541  MEIASILYRLIIYKYPDYIDAYLRLAAISKAQNNIQLSIELVNDALKVNEKCPNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+TFRAA +A DGKDSY+TLSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  ELELKNDDWVKAKETFRAASEAADGKDSYSTLSLGNWNYFAAMRNEKRAPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYTKVLVQH  NLYAANGAGVVLAEKG+FD+SKDIFTQV EAASGS+F+Q+PD+WVN+
Sbjct: 661  KELYTKVLVQHNSNLYAANGAGVVLAEKGQFDVSKDIFTQVQEAASGSIFIQLPDVWVNI 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+ +LLY+ARTHYEAEQWQDCKKTLLRAIHL+
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFYHNTDSHILLYMARTHYEAEQWQDCKKTLLRAIHLS 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            P+NY LRFDAGVAMQKFSASTLQK KR+ADEVRS VAEL+NAVRVFSQ++A ++ H HGF
Sbjct: 781  PANYVLRFDAGVAMQKFSASTLQKQKRTADEVRSAVAELQNAVRVFSQMAAGANLHYHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYCKHLL+AAKVHCE A         RLE+ARQ++L         EQRK Q
Sbjct: 841  DEKKIDTHVGYCKHLLEAAKVHCEVAQREEEQARQRLELARQLALAEEARRKAEEQRKKQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LE+RK EDE K+V QQEE F R+KEQWK+S  MP+SKR++RS A+D++            
Sbjct: 901  LEKRKLEDEQKRVQQQEEHFRRVKEQWKSS--MPASKRRERSDADDEEGGHSEKRRRKGG 958

Query: 648  XXXXXXXXXXXRY-----XXXXXXXXXXXXXXXXXXDGNMINDQQEDGGENAQDLLVAAG 484
                       +Y                         + I+DQ ++  ENAQ +L AAG
Sbjct: 959  KRRKKERSSKSQYETEEAEAEIDDQEDEDAHLNYGEPADQIHDQDDEAEENAQGVLAAAG 1018

Query: 483  LEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEIR 304
            LEDSDAEDE  P    +RRR+AWSESDE+E+    QR  S P   RENSAEL ESDGE R
Sbjct: 1019 LEDSDAEDEAVPPVNASRRRKAWSESDEEEE----QRPESSPV--RENSAELQESDGEFR 1072

Query: 303  ---ENDFRDDESD 274
               E   RD+  D
Sbjct: 1073 ADKEKRNRDEAVD 1085


>ref|XP_012480641.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Gossypium
            raimondii] gi|763739811|gb|KJB07310.1| hypothetical
            protein B456_001G015300 [Gossypium raimondii]
          Length = 1096

 Score = 1593 bits (4125), Expect = 0.0
 Identities = 811/1102 (73%), Positives = 922/1102 (83%), Gaps = 17/1102 (1%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIET+QREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETRQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQA +AFKIVL+GDRDNVPALLGQACV+FNRG Y+D
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFSAFKIVLEGDRDNVPALLGQACVEFNRGRYAD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+PNCPG VRLGIGLCRYKLGQF+KARQAF+RVL+LD ENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPNCPGAVRLGIGLCRYKLGQFQKARQAFQRVLELDLENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D QAN+A GIQKGM+KM+RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLQANDAAGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH++YNLAR YH+KGD+EKAG YYMAS+KEINKPQ+FV PYYGLGQV+LK GDFR+
Sbjct: 301  GPTKSHSFYNLARSYHSKGDFEKAGFYYMASIKEINKPQEFVFPYYGLGQVKLKSGDFRT 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQ +KA E +RKATKIDPRDAQAFL+L ELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVDKAQEFMRKATKIDPRDAQAFLDLAELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSDTGAALDAFKTA  LL+KGG  VP+E+LNNIGVLHFER E ELA + F +ALGDGVW
Sbjct: 421  ISSDTGAALDAFKTARNLLEKGGQAVPVEVLNNIGVLHFEREELELALESFNKALGDGVW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L +   + +   +++  S   YKDM++FH+LEEDG+++ELPW+KVT +FN ARL EQ+H+
Sbjct: 481  LALTGNKPKPYVIEASASILDYKDMQVFHRLEEDGLAVELPWNKVTVVFNLARLHEQLHN 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            T  ANILYRLILFKYPDY+DAYLRLAAIAK+RNN+QLSIEL+  ALKVN+KCPNALSMLG
Sbjct: 541  TGIANILYRLILFKYPDYIDAYLRLAAIAKARNNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+T R+A DATDGKDSYA LSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETLRSASDATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VLVQH  NLYAANGA VVLAEKG+FD+SKDIFTQV E ASGSVFVQMPD+W+NL
Sbjct: 661  KELYTRVLVQHTDNLYAANGAAVVLAEKGQFDVSKDIFTQVQEGASGSVFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AH++FAQG+F LAVKMYQNCL++F Y+TD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLA
Sbjct: 721  AHIFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFS STLQK KR+ADEVRSTVAEL+NAVR+FSQLSAAS+ H+HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI THV YCKHLL+AAKVH EAA         + E ARQ++L         EQRK+ 
Sbjct: 841  DEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKYL 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LERRKQEDE K++ Q EE F R++EQWK+S   P S+R++RS+ +D++            
Sbjct: 901  LERRKQEDEQKRLQQAEEHFKRVQEQWKSS--NPGSRRRERSEIDDEEGGHSEKRRRKGG 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGN--------MINDQQEDGGENAQDLLV 493
                                           D N         +NDQ +D GENAQDLL 
Sbjct: 959  KRRKKDKNKSRYERDDEEPDMMDDREEMEDEDANRNYRESTTRMNDQDDDNGENAQDLLA 1018

Query: 492  AAGLEDSDAEDET--APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPES 319
            AAGLEDSD EDET  APSS   RRRRAWSESD+DE P   + ESSP  G   NSAEL ES
Sbjct: 1019 AAGLEDSDMEDETAAAPSSGAGRRRRAWSESDDDE-PVQRRPESSPVRG---NSAELQES 1074

Query: 318  DGEIREN-------DFRDDESD 274
            DGEIRE+       D  DD+ D
Sbjct: 1075 DGEIREDNRKANGGDALDDDED 1096


>ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citrus clementina]
            gi|557554787|gb|ESR64801.1| hypothetical protein
            CICLE_v10007295mg [Citrus clementina]
          Length = 1088

 Score = 1592 bits (4122), Expect = 0.0
 Identities = 804/1091 (73%), Positives = 912/1091 (83%), Gaps = 9/1091 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALG YY+YLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQAS+AFKIVL+ DRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV P+CPG +RLGIGLCRYKLGQ  KARQAF+R LQLDPENVEALVAL ++
Sbjct: 181  SLELYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D QANEA GI+KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAGLYYMASVKEINKP +F+ PYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +L+NFEKVLE+YP+NCE+LKA+GHIYVQLGQ EKA E LRKA KIDPRDAQAF++LGELL
Sbjct: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSDTGAALDAFKTA  LLKK G+EVPIE+LNNIGV+HFE+GEFE A Q FK+ALGDG+W
Sbjct: 421  ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L ++D + + + +D+  S  Q+KDM+LFH+ E DG  +ELPW+KVT LFN ARLLEQ+HD
Sbjct: 481  LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            T  A++LYRLILFK+ DY+DAYLRLAAIAK+RNN+QLSIEL+  ALKVN K PNALSMLG
Sbjct: 541  TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+TFRAA DATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+V+VQH  NLYAANGAGVVLAEKG+FD+SKD+FTQV EAASGSVFVQMPD+W+NL
Sbjct: 661  KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LA+KMYQNCL++F Y+TDAQ+LLYLARTHYEAEQWQDCKK+LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQKT+R+ADEVRSTVAEL+NAVRVFS LSAAS+ H+HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI THV YCKHLLDAAK+H EAA         R E ARQ +L         EQ+K+ 
Sbjct: 841  DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LE+RK EDE K++ QQEE F R+KEQW++S   P+SKR++RS+ +DD+            
Sbjct: 901  LEKRKLEDEQKRLRQQEEHFQRVKEQWRSS--TPASKRRERSENDDDEVGHSEKRRRKGG 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDG---------NMINDQQEDGGENAQDLL 496
                        Y                  +            +NDQ +D  ENA D L
Sbjct: 959  KRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRL 1018

Query: 495  VAAGLEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESD 316
             AAGLEDSD +DE APS    RRRRA SESD+DE  E            R+N+ EL +SD
Sbjct: 1019 AAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQL---------RDNTDELQDSD 1069

Query: 315  GEIRENDFRDD 283
            GE+REND + +
Sbjct: 1070 GELRENDHKSN 1080


>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
            sinensis]
          Length = 1088

 Score = 1590 bits (4118), Expect = 0.0
 Identities = 803/1091 (73%), Positives = 911/1091 (83%), Gaps = 9/1091 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALG YY+YLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQAS+AFKIVL+ DRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLE YKRALQV P+CPG +RLGIGLCRYKLGQ  KARQAF+R LQLDPENVEALVAL ++
Sbjct: 181  SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D QANEA GI+KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAGLYYMASVKEINKP +F+ PYYGLGQVQLKLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +L+NFEKVLE+YP+NCE+LKA+GHIYVQLGQ EKA E LRKA KIDPRDAQAF++LGELL
Sbjct: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSDTGAALDAFKTA  LLKK G+EVPIE+LNNIGV+HFE+GEFE A Q FK+ALGDG+W
Sbjct: 421  ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L ++D + + + +D+  S  Q+KDM+LFH+ E DG  +ELPW+KVT LFN ARLLEQ+HD
Sbjct: 481  LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            T  A++LYRLILFK+ DY+DAYLRLAAIAK+RNN+QLSIEL+  ALKVN K PNALSMLG
Sbjct: 541  TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+TFRAA DATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+V+VQH  NLYAANGAGVVLAEKG+FD+SKD+FTQV EAASGSVFVQMPD+W+NL
Sbjct: 661  KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LA+KMYQNCL++F Y+TDAQ+LLYLARTHYEAEQWQDCKK+LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQKT+R+ADEVRSTVAEL+NAVRVFS LSAAS+ H+HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI THV YCKHLLDAAK+H EAA         R E ARQ +L         EQ+K+ 
Sbjct: 841  DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LE+RK EDE K++ QQEE F R+KEQW++S   P+SKR++RS+ +DD+            
Sbjct: 901  LEKRKLEDEQKRLRQQEEHFQRVKEQWRSS--TPASKRRERSENDDDEVGHSEKRRRKGG 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDG---------NMINDQQEDGGENAQDLL 496
                        Y                  +            +NDQ +D  ENA D L
Sbjct: 959  KRRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEENANDRL 1018

Query: 495  VAAGLEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESD 316
             AAGLEDSD +DE APS    RRRRA SESD+DE  E            R+N+ EL +SD
Sbjct: 1019 AAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFERQL---------RDNTDELQDSD 1069

Query: 315  GEIRENDFRDD 283
            GE+REND + +
Sbjct: 1070 GELRENDHKSN 1080


>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1089

 Score = 1587 bits (4110), Expect = 0.0
 Identities = 817/1086 (75%), Positives = 918/1086 (84%), Gaps = 8/1086 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WL+IAREYFKQGKI+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EID+YYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRAL V+P+CP  VRLGIGLCRYKLGQFEKA+QAF+RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + NEA GI+ GM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKE+NKP +FV PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQT+K  + +RKATKIDPRDAQAFLELGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I SDTGAALDAFKTA  L KKGG EVPIELLNNIGVL FERGEFELA+Q FKEALGDGVW
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  ++   + SS+D+  ST Q+KDMKLFH LE +G  +E+PWDKVT LFN ARLLEQ++D
Sbjct: 481  LSFINEE-KKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLND 539

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            +  A+ILYRL+LFKYPDY+DAYLRLAAIAK+RNNI LSIEL+ +ALKVN KCPNALSMLG
Sbjct: 540  SGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+T RAA DAT+GKDSYA+LSLGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 600  ELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VL+QH  NLYAANGA VVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 660  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQK KR+ADEVR+TVAEL+NAVRVFSQLSAAS+ HIHGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYC HLL AAKVH EAA         R E+ARQV+          EQRKFQ
Sbjct: 840  DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQ 899

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDELK+V QQEE F R+KEQWK+S     SKR++RS  +D++            
Sbjct: 900  MERRKQEDELKRVQQQEEHFRRVKEQWKSS---SHSKRRERS--DDEEGGGTGEKKRKKG 954

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQE-------DGGENAQDLLVA 490
                                           +   IN ++E       D  ENAQ LL A
Sbjct: 955  GKRRKKDKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGLLAA 1014

Query: 489  AGLEDSDAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDG 313
            AGLEDSDA++E  APSS++ RRR+A SESD+DE   ++QR+SSP    RENSA++  SDG
Sbjct: 1015 AGLEDSDADEEAPAPSSSIARRRQALSESDDDE--PLIQRQSSPA---RENSADMQLSDG 1069

Query: 312  EIREND 295
            EIR+ D
Sbjct: 1070 EIRDGD 1075


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1586 bits (4107), Expect = 0.0
 Identities = 818/1093 (74%), Positives = 917/1093 (83%), Gaps = 7/1093 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKI+Q+R
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVLDGD DNVPALLGQACV+FNRG +SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKR LQV+PNCP  VRLGIGLCRYKLGQFEKA+QAF+RVLQLDPENVE+L+AL I+
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + NEA GI+ GM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKE+NKP +FV PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQT+K  + +RKATKIDPRDAQAFLELGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I SDTGAALDAFKTAH L KKGG EVPIELLNNIGVL FERGEFELA Q FKEALGDGVW
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  ++     SS+D+  ST Q+KDM+LFH LE +G  +E+PWDKVT LFN ARLLEQ++D
Sbjct: 481  LSFINEE-NKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 539

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            +  A+I YRLILFKYPDY+DAYLRLAAIAK+RNNI LSIEL+ +ALKVN KCPNALSMLG
Sbjct: 540  SGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+T R A DATDGKDSYATLSLGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 600  ELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KEL T+VL+QH  NLYAANGA VVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 660  KELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQK KR+ADEVR+TVAEL+NAVRVFSQLSAAS+ HIHGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYC HLL AAKVH EAA         R E+ARQV+L         EQRKFQ
Sbjct: 840  DEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQ 899

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDELK+V +QEE F R+KEQWK+S     SKR++RS  E+              
Sbjct: 900  MERRKQEDELKRVQKQEEHFRRVKEQWKSS---SHSKRRERSDDEEGGTGEKKRKKGGKR 956

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQ----EDGGENAQDLLVAAGL 481
                                           D N   + Q    +D  ENAQ LL AAGL
Sbjct: 957  RKKDKHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGL 1016

Query: 480  EDSDAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEIR 304
            EDSDA++ET APSS++ RRR+A SESD+DE   ++QR+SSP    R+NSA++  SDGEIR
Sbjct: 1017 EDSDADEETAAPSSSIARRRQALSESDDDE--PLLQRQSSPV---RQNSADMQLSDGEIR 1071

Query: 303  ENDFR--DDESDK 271
            + D    DD +D+
Sbjct: 1072 DGDKTNGDDGNDE 1084


>ref|XP_008450914.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            melo]
          Length = 1077

 Score = 1584 bits (4102), Expect = 0.0
 Identities = 807/1084 (74%), Positives = 916/1084 (84%), Gaps = 9/1084 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLL KGE+EQA AAFKIVLDGDRDNVPALLGQACV+FNRG YS+
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+P+CP  VRLGIGLCRY+L Q+ KA+QAF+RVLQLDPENVEALVAL II
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFERVLQLDPENVEALVALAII 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D   NEA  I+ GMEKMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+ +H
Sbjct: 241  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH++YNLAR YH+KGDYEKAGLYYMAS KE NKP++FV PYYGLGQVQLK+GD RS
Sbjct: 301  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LK +GHIYVQLGQ EKA E+LRKATKIDPRDAQAFL+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            IS+D GAALDAFKTA  LL+KGG EVPIE+LNN+GVLHFER EFELAE+IFKEALGDG+W
Sbjct: 421  ISTDEGAALDAFKTASILLRKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  +DG++R  ++++  S  QYK+++LF+QLE +G ++ LPW KVT+LFN ARLLEQ+H 
Sbjct: 481  LDFIDGKVRCPAIEASASVLQYKNVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
             E +++LYRLILFKYPDY+DAYLRLA+IAK+RN +QLSIEL+ +ALKVN+KC NALSMLG
Sbjct: 541  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWV+AK+TFRAAG+ATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEKS
Sbjct: 601  ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VLVQHP NLYAANGAGV+LAEKG+FD+SKDIFTQV EAASG++FVQMPD+W+NL
Sbjct: 661  KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F Y+TD Q+LLYLART+YEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQKTKR+ADEVRSTVAEL+NAVRVFSQLSAAS+ H HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYCKHLL+AA VH +AA         R E+ARQV+L         EQRKFQ
Sbjct: 841  DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LERRK EDE K++MQQE+ F R+KEQWK++ P   +KR++RS+ +DD+            
Sbjct: 901  LERRKLEDEEKRMMQQEQHFKRVKEQWKSTTP---AKRRERSEIDDDEAGNSEKRRRKGG 957

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNM--------INDQQEDGGENAQDLLV 493
                        Y                  D N+        +NDQ +D   N QD L 
Sbjct: 958  KRRKKDRKGKSHYETEEADNDMMDDQELYNEDNNIGYRESRSQVNDQVDDFEGNDQDALA 1017

Query: 492  AAGLEDSDAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESD 316
             AGLEDSDAEDE  APSS   RRR  WS+S+EDE P   QRES      RENSA L +SD
Sbjct: 1018 EAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDE-PIDTQRESRL---QRENSAGLEDSD 1073

Query: 315  GEIR 304
            GEIR
Sbjct: 1074 GEIR 1077


>ref|XP_004513474.1| PREDICTED: protein CTR9 homolog [Cicer arietinum]
          Length = 1080

 Score = 1583 bits (4100), Expect = 0.0
 Identities = 817/1089 (75%), Positives = 910/1089 (83%), Gaps = 3/1089 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK++QFR
Sbjct: 1    MASVYIPVQNSEEEVRVNLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EID+YYA++RYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADIRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+PNCP  VRLGIGLCRYKLGQFEKARQAF+RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + NEA GI+KGM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLRTNEAVGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKEI+KP +FV PYYGLGQVQ+KLGDFRS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+ +IYVQLGQT+K  E +RKATKIDPRDAQAFLELGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALAYIYVQLGQTDKGQEFIRKATKIDPRDAQAFLELGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I SDTGAALDAFKTA  L KKGG+EVPIELLNNIGVL FERGEFELA+Q FKEALGDG+W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGEEVPIELLNNIGVLQFERGEFELAKQTFKEALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L         SS+D+  ST Q+KDM+LFH LE +G  +++PWDKVT LFN  RLLEQ+++
Sbjct: 481  LSFF-SETNKSSIDAATSTLQFKDMQLFHDLESNGHHIDVPWDKVTVLFNLGRLLEQLNE 539

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            +  A+ILYRLILFKYPDY+DAYLRLAAIAK+RNNI LSIEL+ +ALKVN+KCPNALSMLG
Sbjct: 540  SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 599

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+T RAA DATDGKDSYATLSLGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 600  ELELKNDDWVKAKETLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VL+QH  NLYAANGA VV AEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 660  KELYTRVLIQHSANLYAANGAAVVFAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+QVLLYLARTHYEAEQWQDC KTL RAIHLA
Sbjct: 720  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQVLLYLARTHYEAEQWQDCIKTLQRAIHLA 779

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQK KR+ADEVR+TVA L+NAVR+FSQLSAAS+ HIHGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAGLQNAVRIFSQLSAASNLHIHGF 839

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYC HLL AAKVH EAA         R E+ARQV+L         EQRKFQ
Sbjct: 840  DEKKIDTHVGYCTHLLSAAKVHLEAAEREEQQIRERHELARQVALAEDARRKAEEQRKFQ 899

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDE+K+V QQEE F R+KEQWK+S     SKR++RS  ED              
Sbjct: 900  MERRKQEDEIKQVQQQEEHFKRVKEQWKSS---THSKRRERSDDEDGGGAGEKKRRKGGK 956

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQEDGGENAQDLLVAAGLEDSD 469
                                           D N    Q  D  EN   LL AAGLEDSD
Sbjct: 957  KRKKDKHSKSRNDTEEMEADMMDEQEMEDDADMNEPQTQMNDVEENPHGLLAAAGLEDSD 1016

Query: 468  AEDE-TAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEIREND- 295
            AEDE   PSS ++RRR+A SESD+DE    + R+SSP    RE SA++ ESDGEIR+ D 
Sbjct: 1017 AEDEPVGPSSTISRRRQALSESDDDEP---IMRQSSPV---REYSADMQESDGEIRDEDK 1070

Query: 294  -FRDDESDK 271
               D+ SD+
Sbjct: 1071 THGDEASDE 1079


>ref|XP_011660015.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1077

 Score = 1582 bits (4097), Expect = 0.0
 Identities = 807/1084 (74%), Positives = 913/1084 (84%), Gaps = 9/1084 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLL KGE+EQA AAFKIVLDGDRDNVPALLGQACV+FNRG YS+
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+P+CP  VRLGIGLCRY+L Q+ KA+QAF+RVLQLDPENVEALV L II
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFERVLQLDPENVEALVGLAII 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D   NEA  I+ GMEKMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+ +H
Sbjct: 241  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH++YNLAR YH+KGDYEKAGLYYMAS KE NKP++FV PYYGLGQVQLK+GD RS
Sbjct: 301  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LK +GHIYVQLGQ EKA E+LRKATKIDPRDAQAFL+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            IS+D  AALDAFKTA  LLKKGG EVPIE+LNN+GVLHFER EFELAE+IFKEALGDG+W
Sbjct: 421  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  +DG++R  ++++  S  QYKD++LF+QLE +G ++ LPW KVT+LFN ARLLEQ+H 
Sbjct: 481  LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
             E +++LYRLILFKYPDY+DAYLRLA+IAK+RN +QLSIEL+ +ALKVN+KC NALSMLG
Sbjct: 541  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWV+AK+TFRAAG+ATDGKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEKS
Sbjct: 601  ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VLVQHP NLYAANGAGV+LAEKG+FD+SKDIFTQV EAASG++FVQMPD+W+NL
Sbjct: 661  KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F Y+TD Q+LLYLART+YEAEQWQDCKKTLLRAIHLA
Sbjct: 721  AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQKTKR+ADEVRSTVAEL+NAVRVFSQLSAAS+ H HGF
Sbjct: 781  PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYCKHLL+AA VH +AA         R E+ARQV+L         EQRKFQ
Sbjct: 841  DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LERRK EDE K++MQQE+ F R+KEQWK+  P   +KR++RS+ +DD+            
Sbjct: 901  LERRKLEDEEKRMMQQEQHFKRVKEQWKSITP---AKRRERSEIDDDEAGNSEKRRRKGG 957

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNM--------INDQQEDGGENAQDLLV 493
                        Y                  D N+        +NDQ +D   N QD L 
Sbjct: 958  KRRKKDRKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALA 1017

Query: 492  AAGLEDSDAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESD 316
             AGLEDSDAEDE  APSS   RRR  WS+S+EDE P   QRES      RENSA L +SD
Sbjct: 1018 EAGLEDSDAEDEAGAPSSNAARRRATWSDSEEDE-PIDTQRESRL---QRENSAGLEDSD 1073

Query: 315  GEIR 304
            GEIR
Sbjct: 1074 GEIR 1077


>gb|KHN12273.1| RNA polymerase-associated protein CTR9 like [Glycine soja]
          Length = 1086

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 815/1086 (75%), Positives = 915/1086 (84%), Gaps = 8/1086 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WL+IAREYFKQGKI+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EID+YYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRAL V+P+CP  VRLGIGLCRYKLGQFEKA+QAF+R   LDPENVEALVAL I+
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + NEA GI+ GM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 238  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKE+NKP +FV PYYGLGQVQ+KLGDF+S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQT+K  + +RKATKIDPRDAQAFLELGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I SDTGAALDAFKTA  L KKGG EVPIELLNNIGVL FERGEFELA+Q FKEALGDGVW
Sbjct: 418  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  ++   + SS+D+  ST Q+KDMKLFH LE +G  +E+PWDKVT LFN ARLLEQ++D
Sbjct: 478  LSFINEE-KKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLND 536

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            +  A+ILYRL+LFKYPDY+DAYLRLAAIAK+RNNI LSIEL+ +ALKVN KCPNALSMLG
Sbjct: 537  SGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 596

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+T RAA DAT+GKDSYATLSLGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 597  ELELKNDDWVKAKETLRAASDATEGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 656

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VL+QH  NLYAANGA VVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 657  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 716

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 717  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 776

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQK KR+ADEVR+TVAEL+NAVRVFSQLSAAS+ HIHGF
Sbjct: 777  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 836

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYC HLL AAKVH EAA         R E+ARQV+          EQRKFQ
Sbjct: 837  DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQ 896

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDELK+V QQEE F R+KEQWK+S     SKR++RS  +D++            
Sbjct: 897  MERRKQEDELKRVQQQEEHFRRVKEQWKSS---SHSKRRERS--DDEEGGGTGEKKRKKG 951

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQE-------DGGENAQDLLVA 490
                                           +   IN ++E       D  ENAQ LL A
Sbjct: 952  GKRRKKDKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGLLAA 1011

Query: 489  AGLEDSDAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDG 313
            AGLEDSDA++E  APSS++ RRR+A SESD+DE   ++QR+SSP    RENSA++  SDG
Sbjct: 1012 AGLEDSDADEEAPAPSSSIARRRQALSESDDDE--PLIQRQSSPA---RENSADMQLSDG 1066

Query: 312  EIREND 295
            EIR+ D
Sbjct: 1067 EIRDGD 1072


>ref|XP_007138670.1| hypothetical protein PHAVU_009G228100g [Phaseolus vulgaris]
            gi|561011757|gb|ESW10664.1| hypothetical protein
            PHAVU_009G228100g [Phaseolus vulgaris]
          Length = 1082

 Score = 1578 bits (4087), Expect = 0.0
 Identities = 814/1090 (74%), Positives = 921/1090 (84%), Gaps = 4/1090 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKI+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EID+YYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVLDG RDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGVRDNVPALLGQACVEFNRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SL+LYKRALQVFPNCP  VRLGIGLCRYKLGQFEKA+QAF+RVL LDPENVEALVAL I+
Sbjct: 181  SLDLYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLHLDPENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + NEA GI+KGM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLRTNEAIGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKE+NKP +FV PYYGLGQVQ+KLGDF+S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQVKLGDFKS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+ HIYVQLGQT+K  + +R+ATKIDPRDAQAFLELGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALAHIYVQLGQTDKGQDFIRRATKIDPRDAQAFLELGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I SDTGAALDAFKTA  L KKGG EVPIELLNN+GVL FERGEFELA+Q FKEALGDG+W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNVGVLQFERGEFELAQQTFKEALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
               ++   + SS+D+  ST Q+KDM+LFH  E +G  +E+P DKVT LFN ARLLEQ+++
Sbjct: 481  QSFINEE-KKSSVDAATSTLQFKDMQLFHDFESNGHHVEVPLDKVTVLFNLARLLEQLNE 539

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            +  A+ILYRLILFKYPDY+DAYLRLAAIAK RNNI LSIEL+ +ALKVN+KCPNALSMLG
Sbjct: 540  SGTASILYRLILFKYPDYIDAYLRLAAIAKDRNNILLSIELVNDALKVNDKCPNALSMLG 599

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+T RAA DAT+GKDSYATLSLGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 600  ELELKNDDWVKAKETLRAASDATEGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VL+QH  NLYAANGA VVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 660  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 720  AHVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQK KR+ADEVR+TVAEL+NAVRVFSQLSAAS+ HIHGF
Sbjct: 780  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYC HLL AAKVH EAA         R E+ARQV+L         EQRKFQ
Sbjct: 840  DEKKIDTHVGYCTHLLTAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQ 899

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDELK+V QQEE F R+KEQWK++     SKR++RS  +D++            
Sbjct: 900  MERRKQEDELKRVQQQEEHFKRVKEQWKSN---SHSKRRERS--DDEEGGTGEKKKRKSG 954

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQ-QEDGGENAQDLLVAAGLEDS 472
                       RY                  +G++  ++ Q  G ENA  LL AAGLEDS
Sbjct: 955  KKRKKDKHSKSRYDTEEPEADMMDEQEMEDEEGDVYREEPQTHGEENAHGLLAAAGLEDS 1014

Query: 471  DAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEIREND 295
            DA++E  APSS++ RRR+A SES++DE    ++R+SSP    RENS E+ ESDGEIR+ D
Sbjct: 1015 DADEEMGAPSSSIARRRQALSESEDDEP---LRRQSSPV---RENSGEMQESDGEIRDLD 1068

Query: 294  FR--DDESDK 271
                DD +D+
Sbjct: 1069 KTNGDDGTDE 1078


>gb|KHG23804.1| RNA polymerase-associated CTR9 [Gossypium arboreum]
          Length = 1111

 Score = 1576 bits (4082), Expect = 0.0
 Identities = 807/1112 (72%), Positives = 919/1112 (82%), Gaps = 27/1112 (2%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIET+QREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETRQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQA +AFKIVL+GDRDNVPALLGQACV+FNRG Y+D
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFSAFKIVLEGDRDNVPALLGQACVEFNRGRYAD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+PNCPG VRLGIGLCRYKLGQF+KARQAF+RVL+LD ENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPNCPGAVRLGIGLCRYKLGQFQKARQAFQRVLELDSENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D QAN+A GIQKGM+KM+RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 241  DLQANDAAGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH++YNLAR YH+KGD+EKAG YYMAS+KEINKPQ+FV PYYGLGQV+LK GDFR+
Sbjct: 301  GPTKSHSFYNLARSYHSKGDFEKAGYYYMASIKEINKPQEFVFPYYGLGQVKLKSGDFRT 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQ +KA E +RKATKIDPRDAQAFL+L ELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVDKAQEFMRKATKIDPRDAQAFLDLAELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSDTGAALD+FKTA  LL+KGG  VP+E+LNNIGVLHFER E ELA + F +ALGDGVW
Sbjct: 421  ISSDTGAALDSFKTARNLLEKGGQAVPVEVLNNIGVLHFEREELELALESFNKALGDGVW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L +   + +   +++  S   YKDM++FH+LEEDG+++ELPW+KVT +FN ARL EQ+H+
Sbjct: 481  LALTGNKPKPYVIEASASVLDYKDMQVFHRLEEDGLAVELPWNKVTAVFNLARLHEQLHN 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            T  ANILYRLILFKYPDY+DAYLRLAAIAK+RNN+QLSIEL+  ALKVN+KCPNALSMLG
Sbjct: 541  TGIANILYRLILFKYPDYIDAYLRLAAIAKARNNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+T R+A DATDGKDSYA LSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETLRSASDATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VL QH  NLYAANGA VVLAEKG+FD+SKDIFTQV E ASGSVFVQMPD+W+NL
Sbjct: 661  KELYTRVLAQHTDNLYAANGAAVVLAEKGQFDVSKDIFTQVQEGASGSVFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AH++FAQG+F LAVKMYQNCL++F Y+TD+Q+LLYLARTHYEAEQWQ+CKKTLLRAIHLA
Sbjct: 721  AHIFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADE-----------------VRSTVAELKNAV 1060
            PSNYTLRFDAGVAMQKFS STLQK KR+ADE                 VRSTVAEL+NAV
Sbjct: 781  PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEIMRDTVILPCIFKQQLCVRSTVAELENAV 840

Query: 1059 RVFSQLSAASSYHIHGFDEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQV 880
            R+FSQLSAAS+ H+HGFDEKKI THV YCKHLL+AAKVH EAA         + E ARQ+
Sbjct: 841  RIFSQLSAASNLHLHGFDEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQKQEAARQL 900

Query: 879  SLXXXXXXXXXEQRKFQLERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQ 700
            +L         EQRK+ LERRKQEDE K++ Q EE F R  EQWK+S   P S+R+DRS+
Sbjct: 901  ALAEEARRKAEEQRKYLLERRKQEDEQKRLQQAEEHFKR--EQWKSS--NPGSRRRDRSE 956

Query: 699  AEDDDXXXXXXXXXXXXXXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGN--------M 544
             +D++                                           D N         
Sbjct: 957  IDDEEGGHSEKRRRKGGKRRKKDKNKSRYERDDEEPDMMDDREEMEDEDANRNYGESTTR 1016

Query: 543  INDQQEDGGENAQDLLVAAGLEDSDAEDET--APSSAVNRRRRAWSESDEDEQPEMMQRE 370
            +NDQ +D GENAQDLL AAGLEDSD EDET  APSSA  RRRRAWSESD+DEQ  + +R 
Sbjct: 1017 MNDQDDDNGENAQDLLAAAGLEDSDMEDETAAAPSSAAGRRRRAWSESDDDEQ--LQRRP 1074

Query: 369  SSPPAGDRENSAELPESDGEIRENDFRDDESD 274
             S P   R NSAEL ESDGEIRE++ + +  D
Sbjct: 1075 ESSPV--RGNSAELQESDGEIREDNRKPNGGD 1104


>ref|XP_008242215.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Prunus
            mume]
          Length = 1091

 Score = 1576 bits (4082), Expect = 0.0
 Identities = 802/1083 (74%), Positives = 907/1083 (83%), Gaps = 7/1083 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV LDQLPR+A+DI+DILKAEQA LD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVVLDQLPREATDIIDILKAEQASLDLWLIIAREYFKQGKLEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGS  EIDEYYA+VRYERIAILNALGAYY+YLGKIETKQREK+EHFILATQ+YNKA
Sbjct: 61   QILEEGSGSEIDEYYADVRYERIAILNALGAYYTYLGKIETKQREKEEHFILATQFYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRID+H+PSTWVGKGQLLLAKGE++QA +AFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDIHEPSTWVGKGQLLLAKGEVDQAFSAFKIVLDGDRDNVPALLGQACVEFNRGHYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV P+CP  VRLGIGLCRYK+GQFEKARQAF+RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALQVHPDCPAAVRLGIGLCRYKMGQFEKARQAFQRVLQLDPENVEALVALAIM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D  AN A GI++GMEKMQRAFEIYPYCAMALNYLANHFF+TGQHFLVEQLTETALAV +H
Sbjct: 241  DLHANTAAGIRRGMEKMQRAFEIYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAG+YYMASVKEI+KP +FV PYYGLGQVQLK+GD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGVYYMASVKEISKPLEFVFPYYGLGQVQLKMGDLRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NC++LK +GHIY QLGQTEKALE +RKATKIDP D+QAFL+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCDALKVLGHIYFQLGQTEKALEFMRKATKIDPCDSQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSD GAALD  KTA  LLKK G+EVPIE+LNN+GVLHFERGEFE A+Q F+EALGDG+W
Sbjct: 421  ISSDGGAALDCLKTARNLLKKEGEEVPIEVLNNLGVLHFERGEFEFAQQTFREALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  +DG+    S+D+  S  QYKD+ +FHQLE++G  +ELPW+KVTTLFN ARLLEQ+H+
Sbjct: 481  LAFIDGKENPPSIDANASISQYKDLHIFHQLEKEGHLVELPWNKVTTLFNLARLLEQLHN 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
             E A+ILYRLILFKYPDY+DAYLRLAA+AK+RNN QLSIEL+ +ALKVN KCPNAL MLG
Sbjct: 541  IETASILYRLILFKYPDYVDAYLRLAALAKARNNFQLSIELVNDALKVNNKCPNALLMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+TFRAA +AT+GKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEK+
Sbjct: 601  DLELKNDDWVKAKETFRAASEATEGKDSYATLSLGNWNYFAAIRNEKRAPKLEATHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYTKVL QH  NLYAANGAGVV AEKG FD+SKDIFTQV EAASG++FVQMPD+W+NL
Sbjct: 661  KELYTKVLAQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F  +TD+Q+LLYLARTHYEAEQWQDCKK LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQDCKKNLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGV MQKFSASTLQK K+S DEVRSTVAEL+NAVR+F QLSAASS H HGF
Sbjct: 781  PSNYTLRFDAGVVMQKFSASTLQKPKKSVDEVRSTVAELENAVRLFRQLSAASSLHFHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THV YC HLL+AA+VH + A         + EVARQ++L         EQRKFQ
Sbjct: 841  DEKKIDTHVEYCSHLLEAARVHFKVAEHEEQKIRHKQEVARQMALAEEARRKAEEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LERR QEDELK+V QQEEQF RIKEQWK+S   P SKR++RS+ +D++            
Sbjct: 901  LERRLQEDELKRVRQQEEQFERIKEQWKSS--TPGSKRRERSEMDDEEGGNSEKRRRKGG 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQ-------QEDGGENAQDLLVA 490
                       RY                  +    N +       ++D  EN QD L A
Sbjct: 959  KRRKKDKFSRSRYDTLEAEADMMEDQEELEDEDANTNYREPTGQMNEQDDEENVQDPLAA 1018

Query: 489  AGLEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGE 310
            AGLEDSDAEDE APS+   RRRRAWSESD+DEQ E  Q  SSP    RENSAEL +SDGE
Sbjct: 1019 AGLEDSDAEDEAAPSTTTLRRRRAWSESDDDEQQE-RQPGSSPV---RENSAEL-QSDGE 1073

Query: 309  IRE 301
             RE
Sbjct: 1074 GRE 1076


>gb|KHN06085.1| RNA polymerase-associated protein CTR9 like [Glycine soja]
          Length = 1085

 Score = 1573 bits (4072), Expect = 0.0
 Identities = 814/1093 (74%), Positives = 912/1093 (83%), Gaps = 7/1093 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRV+LDQLPRDASDILDILKAEQ PLD+WLIIAREYFKQGKI+Q+R
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQVPLDLWLIIAREYFKQGKIDQYR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFILATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKGE+EQASAAFKIVLDGD DNVPALLGQACV+FNRG +SD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYK  LQV+PNCP  VRLGIGLCRYKLGQFEKA+QAF+R   LDPENVE+L+AL I+
Sbjct: 181  SLELYKVVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVESLIALAIM 237

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D + NEA GI+ GM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV +H
Sbjct: 238  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKE+NKP +FV PYYGLGQVQ+KLGDF+S
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+NCE+LKA+GHIYVQLGQT+K  + +RKATKIDPRDAQAFLELGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            I SDTGAALDAFKTAH L KKGG EVPIELLNNIGVL FERGEFELA Q FKEALGDGVW
Sbjct: 418  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 477

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  ++     SS+D+  ST Q+KDM+LF  LE +G  +E+PWDKVT LFN ARLLEQ++D
Sbjct: 478  LSFINEE-NKSSIDAATSTLQFKDMQLFRDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 536

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            +  A+I YRLILFKYPDY+DAYLRLAAIAK+RNNI LSIEL+ +ALKVN KCPNALSMLG
Sbjct: 537  SGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 596

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
             LELK+DDWVKAK+T R A DATDGKDSYATLSLGNWNYFAAVR+EKR PKLEATHLEK+
Sbjct: 597  ELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 656

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYT+VL+QH  NLYAANGA VVLAEKG FD+SKDIFTQV EAASGSVFVQMPD+W+NL
Sbjct: 657  KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 716

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F ++TD+Q+LLYLARTHYEAEQWQDC KTLLRAIHLA
Sbjct: 717  AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 776

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGVAMQKFSASTLQK KR+ADEVR+TVAEL+NAVRVFSQLSAAS+ HIHGF
Sbjct: 777  PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 836

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THVGYC HLL AAKVH EAA         R E+ARQV+L         EQRKFQ
Sbjct: 837  DEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQ 896

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDELK+V QQEE F R+KEQWK+S     SKR++RS  E+              
Sbjct: 897  MERRKQEDELKRVQQQEEHFRRVKEQWKSS---SLSKRRERSDDEEGGTGEKKRKKGGKR 953

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQQ----EDGGENAQDLLVAAGL 481
                                           D N   + Q    +D  ENAQ LL AAGL
Sbjct: 954  RKKDKHSKLRYDAEEPEDDLMDEQGMEDEEVDINYREEPQTQMNDDAEENAQGLLAAAGL 1013

Query: 480  EDSDAEDET-APSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEIR 304
            EDSDA++ET APSS++ RRR+A SESD+DE   ++QR+SSP    R+NSA++  SDGEIR
Sbjct: 1014 EDSDADEETAAPSSSIARRRQALSESDDDE--PLLQRQSSPV---RQNSADMQLSDGEIR 1068

Query: 303  ENDFR--DDESDK 271
            + D    DD +D+
Sbjct: 1069 DEDKTNGDDGNDE 1081


>ref|XP_006849650.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Amborella
            trichopoda] gi|548853225|gb|ERN11231.1| hypothetical
            protein AMTR_s00024p00227830 [Amborella trichopoda]
          Length = 1078

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 803/1089 (73%), Positives = 900/1089 (82%), Gaps = 4/1089 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEVRV+LDQLPRDA+DILDILKAEQAPLD+WLIIAREYFKQGK+EQFR
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA V YERIA+LNALGAYY YLGKIETKQREK++HFI ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYAGVTYERIAMLNALGAYYCYLGKIETKQREKEDHFISATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRI+MH+PSTWVGKGQLLLAKG+LEQAS AFKIVLDG  DN+PALLGQACV+FN G Y +
Sbjct: 121  SRINMHEPSTWVGKGQLLLAKGDLEQASNAFKIVLDGQPDNIPALLGQACVKFNNGRYME 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRAL+  PNCP  VRLG+GLCRYKLGQF+KARQAF+RVLQLDPENVEALVALG++
Sbjct: 181  SLELYKRALRGNPNCPAAVRLGLGLCRYKLGQFDKARQAFQRVLQLDPENVEALVALGVM 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D Q +EA  I  GMEKMQRAFE YPYCAMALNYLANHFFFTGQHFLVEQLTETALA+ DH
Sbjct: 241  DLQTDEAIAIHSGMEKMQRAFERYPYCAMALNYLANHFFFTGQHFLVEQLTETALALGDH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
             +MKSH+YYNLAR YH+KGDYEKAG YYMAS+KE N+PQDFVLPYYGLGQVQLKLG+ +S
Sbjct: 301  VMMKSHSYYNLARSYHSKGDYEKAGRYYMASIKECNRPQDFVLPYYGLGQVQLKLGELKS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYPENCESLKAVGHI+ QLGQTEKAL+  RKAT+IDPRDAQAFLELGELL
Sbjct: 361  ALSNFEKVLEVYPENCESLKAVGHIHAQLGQTEKALDIFRKATRIDPRDAQAFLELGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            +SSDTGAALDA +TA GLLKKGG+EV +ELLNNIGVLHFERGEFELA+Q FKEALG+G+W
Sbjct: 421  VSSDTGAALDALRTARGLLKKGGEEVSVELLNNIGVLHFERGEFELADQTFKEALGEGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  MDG+I   S+D+R    QYKD   F +LEEDG  LELPWDKVT LFN ARLLEQ+HD
Sbjct: 481  LSFMDGKIYPPSVDARAFAMQYKDFSFFQKLEEDGTPLELPWDKVTALFNQARLLEQLHD 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            TEKA +LY+LILFK+PDY DAYLRLAAI+KSRNNI++SIELIG+ALKVNEKCP ALSMLG
Sbjct: 541  TEKACLLYKLILFKFPDYGDAYLRLAAISKSRNNIRMSIELIGDALKVNEKCPEALSMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK DDW KAK+TF+AA +ATDG+DSYATLSLGNWNYFAAVR+EK+ PKLEA HLEK+
Sbjct: 601  SLELKGDDWFKAKETFKAAREATDGRDSYATLSLGNWNYFAAVRNEKKEPKLEAAHLEKA 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            +ELY KVL+Q PG+LYAANGAGVVLAEKG FD+SKDIFTQV EAA+GS+FVQMPD+WVNL
Sbjct: 661  RELYGKVLMQRPGSLYAANGAGVVLAEKGHFDVSKDIFTQVQEAATGSIFVQMPDVWVNL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG F LAVKMYQNCL++F ++TD QVLLYLARTHYEAEQWQDCKKTLLRAIHL 
Sbjct: 721  AHVYFAQGQFALAVKMYQNCLRKFYHNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLQ 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNY LRFDAGVA+QKFSASTLQKTKR+ADEVR  VAELKNA+RVFSQLS A+ +H HGF
Sbjct: 781  PSNYMLRFDAGVALQKFSASTLQKTKRTADEVRLAVAELKNALRVFSQLSVATGHHCHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKIETHVGYCKHLLDAAKVHCEAA         +LEVARQ+ L         EQRKFQ
Sbjct: 841  DEKKIETHVGYCKHLLDAAKVHCEAAEREEQQIRQKLEVARQLVLAEEARRKAEEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            +ERRKQEDELK+VMQQEEQF R+KE W+       SKRKDR  AED++            
Sbjct: 901  MERRKQEDELKQVMQQEEQFERVKELWR-------SKRKDRPHAEDEEEGGHGEKKKKKE 953

Query: 648  XXXXXXXXXXXRY-XXXXXXXXXXXXXXXXXXDGNMINDQQEDGGENAQDLLVAAGLEDS 472
                                            D NM+N+++ED GENAQD L AAGLED 
Sbjct: 954  KKRRKKDKHNKSLAEIEEQEADMEEPEEMEEDDANMLNEKEED-GENAQDALAAAGLEDF 1012

Query: 471  DAEDE---TAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGEIRE 301
            D E+E    A +S  +RR+ AWSESD DE P         P  D+E+  E+P  +   + 
Sbjct: 1013 DDEEEMMQNASASKPSRRKPAWSESDNDE-PIDRPAAIEQPHSDQESDKEIPSHENGTQG 1071

Query: 300  NDFRDDESD 274
             D  D+E D
Sbjct: 1072 LD--DEEED 1078


>ref|XP_009800504.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nicotiana
            sylvestris]
          Length = 1095

 Score = 1568 bits (4059), Expect = 0.0
 Identities = 806/1091 (73%), Positives = 900/1091 (82%), Gaps = 31/1091 (2%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MA VYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLD+WLIIAREYFKQGKI+QFR
Sbjct: 1    MASVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGSS EIDEYYA+VRYERIAILNALGAYYSYLGKIETKQREK+EHFI+ATQYYNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRIDMH+PSTWVGKGQLLLAKG++EQA AAFKIVLDGDRDNVPALLGQACVQF+RG YSD
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGDIEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV+P CP  VRLGIGLCRYKLGQ EKA+QAF+RVL+LDPENVEALVAL I+
Sbjct: 181  SLELYKRALQVYPECPAAVRLGIGLCRYKLGQVEKAKQAFRRVLELDPENVEALVALAIL 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D Q N+A GI++GMEKMQRAFE YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV  H
Sbjct: 241  DLQNNDASGIRRGMEKMQRAFETYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDYEKAG+YYMASVKE NKP +FVLPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESNKPHEFVLPYYGLGQVQLKLGDLRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            S +NFEKVLEVYPE+ E++KA+ HIYVQLGQTEKA E L+KATKIDPRD QAFL++GELL
Sbjct: 361  SQANFEKVLEVYPESYETVKALAHIYVQLGQTEKAQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            IS+D  AAL+AFKTA  LLKK  +EVPIELLNNIGVLHFERGEFELA Q FKEALGDG+W
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFERGEFELAAQSFKEALGDGIW 480

Query: 2088 LYVMDGRIRNSS------------------------MDSRDSTDQYKDMKLFHQLEEDGV 1981
            L  +D + ++                          +++ +S  QYKD +LFH+LEE G+
Sbjct: 481  LKFLDAKGQSDDPTSEGHLYSNGEARSDMFKSAQYPINASESVQQYKDFQLFHRLEEQGI 540

Query: 1980 SLELPWDKVTTLFNHARLLEQMHDTEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQ 1801
            S+ELPW+KV+TLFN ARLLEQ+HDTE A+I YRLILFKYP Y+DAYLRLAAIAK+RNN+Q
Sbjct: 541  SVELPWNKVSTLFNMARLLEQLHDTETASIFYRLILFKYPGYVDAYLRLAAIAKARNNVQ 600

Query: 1800 LSIELIGNALKVNEKCPNALSMLGNLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGN 1621
            LSIELIG+ALKV+EKCP+AL MLG+LELK+DDWVKAK+TFRAA DATDG DSYATL LGN
Sbjct: 601  LSIELIGDALKVDEKCPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 1620 WNYFAAVRSEKRGPKLEATHLEKSKELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKD 1441
            WNYFAA+R+EKR PKLEATHLEK+KELYTKVL QH  NLYAANGAGVVLAEKG+FDISKD
Sbjct: 661  WNYFAAIRNEKRAPKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISKD 720

Query: 1440 IFTQVHEAASGSVFVQMPDIWVNLAHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYL 1261
            +FTQV EAASG+VFVQMPD+W+NLAHV+FAQG+F LAVKMY+NCL++F ++TD+QVLLYL
Sbjct: 721  LFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYENCLRKFYHNTDSQVLLYL 780

Query: 1260 ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTV 1081
            ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFD+GVA+QKFSASTLQKTKR+ DEVR+TV
Sbjct: 781  ARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDSGVALQKFSASTLQKTKRTVDEVRATV 840

Query: 1080 AELKNAVRVFSQLSAASSYHIHGFDEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXR 901
            AELKNAVR+FS LSAAS+ H+HGFDEKKIETHVGYCKHLL+AAKVHCEAA         R
Sbjct: 841  AELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQR 900

Query: 900  LEVARQVSLXXXXXXXXXEQRKFQLERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSS 721
            LE+ARQV L         EQRK+QLERRKQEDELK+VMQQE+   RIKEQWK+S   P+S
Sbjct: 901  LELARQVILAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSS--TPAS 958

Query: 720  KRKDRSQAEDDDXXXXXXXXXXXXXXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNM- 544
            KRKDR Q EDD+                                             N  
Sbjct: 959  KRKDRPQTEDDEGGHGEKRRKKGGKRRKRDKKSHYESEEAEAEMDDQEEMDDGDRHRNYE 1018

Query: 543  -----INDQQEDGGENAQDLLVAAGLEDSDAEDET-APSSAVNRRRRAWSESDEDEQPEM 382
                  ND  E   +N QDLL AAGLEDSDAED+T APS+  +RRR+A SESDEDE P  
Sbjct: 1019 EPYYPTNDHDEQAEDNPQDLLAAAGLEDSDAEDDTAAPSANASRRRQALSESDEDE-PLP 1077

Query: 381  MQRESSPPAGD 349
             Q       GD
Sbjct: 1078 RQGSDGEGGGD 1088


>ref|XP_008354456.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Malus
            domestica]
          Length = 1090

 Score = 1566 bits (4055), Expect = 0.0
 Identities = 798/1083 (73%), Positives = 911/1083 (84%), Gaps = 7/1083 (0%)
 Frame = -3

Query: 3528 MACVYIPVQNSEEEVRVSLDQLPRDASDILDILKAEQAPLDVWLIIAREYFKQGKIEQFR 3349
            MACVYIPVQNSEEEV V LDQLP++A+DI+DILKAEQA LD+WLIIAREYFKQGK++QFR
Sbjct: 1    MACVYIPVQNSEEEVMVVLDQLPKEATDIIDILKAEQASLDLWLIIAREYFKQGKLDQFR 60

Query: 3348 QILLEGSSHEIDEYYAEVRYERIAILNALGAYYSYLGKIETKQREKDEHFILATQYYNKA 3169
            QIL EGS  EIDEYY++VRYERIAILNALGAYY+YLGKIETKQREK+EHFILATQ+YNKA
Sbjct: 61   QILEEGSGAEIDEYYSDVRYERIAILNALGAYYTYLGKIETKQREKEEHFILATQFYNKA 120

Query: 3168 SRIDMHDPSTWVGKGQLLLAKGELEQASAAFKIVLDGDRDNVPALLGQACVQFNRGFYSD 2989
            SRID+H+PSTWVGKGQLLLAKGE++QA +AFKIVLDGDRDNVPALLGQACV+FNRG YSD
Sbjct: 121  SRIDIHEPSTWVGKGQLLLAKGEVDQAFSAFKIVLDGDRDNVPALLGQACVEFNRGHYSD 180

Query: 2988 SLELYKRALQVFPNCPGPVRLGIGLCRYKLGQFEKARQAFKRVLQLDPENVEALVALGII 2809
            SLELYKRALQV P+CP  VRLGIGLCRYK+GQF+KARQAF+RVLQLDPENVEALVAL I+
Sbjct: 181  SLELYKRALQVHPDCPAAVRLGIGLCRYKMGQFDKARQAFERVLQLDPENVEALVALAIL 240

Query: 2808 DFQANEAHGIQKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVCDH 2629
            D  AN A GI++GMEKMQRAFEIYPYCAMALNYLANHFF+TGQHFLVEQLTETALAV +H
Sbjct: 241  DLHANTAAGIRRGMEKMQRAFEIYPYCAMALNYLANHFFYTGQHFLVEQLTETALAVTNH 300

Query: 2628 GLMKSHAYYNLARCYHTKGDYEKAGLYYMASVKEINKPQDFVLPYYGLGQVQLKLGDFRS 2449
            G  KSH+YYNLAR YH+KGDY+KAG+YYMASVKEI+KP +FV PYYGLGQVQLK+GD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQLKMGDLRS 360

Query: 2448 SLSNFEKVLEVYPENCESLKAVGHIYVQLGQTEKALETLRKATKIDPRDAQAFLELGELL 2269
            +LSNFEKVLEVYP+N ++LK +GHIYVQLGQTEKALE +RKATK+DP D+QAFL+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNSDTLKVLGHIYVQLGQTEKALEFMRKATKVDPNDSQAFLDLGELL 420

Query: 2268 ISSDTGAALDAFKTAHGLLKKGGDEVPIELLNNIGVLHFERGEFELAEQIFKEALGDGVW 2089
            ISSD GAALD  KTAH LLKK G EVPIE+LNN+GVLHFERGEFELA+Q F+EALGDG+W
Sbjct: 421  ISSDAGAALDCLKTAHNLLKKEGQEVPIEVLNNLGVLHFERGEFELAQQTFREALGDGIW 480

Query: 2088 LYVMDGRIRNSSMDSRDSTDQYKDMKLFHQLEEDGVSLELPWDKVTTLFNHARLLEQMHD 1909
            L  +DG+    S+D+  +  QYKDM +FH LE++G  +ELPWDKVT LFN ARLLEQ+H 
Sbjct: 481  LAFIDGKENPPSIDANATISQYKDMGIFHHLEKEGHLVELPWDKVTALFNLARLLEQLHI 540

Query: 1908 TEKANILYRLILFKYPDYLDAYLRLAAIAKSRNNIQLSIELIGNALKVNEKCPNALSMLG 1729
            TE A+ILYRLILFKYPDY+DAYLRLAA+AK+RNN QLSIEL+ +ALKVN KCPNAL MLG
Sbjct: 541  TETASILYRLILFKYPDYVDAYLRLAALAKARNNFQLSIELVNDALKVNNKCPNALLMLG 600

Query: 1728 NLELKSDDWVKAKDTFRAAGDATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKS 1549
            +LELK+DDWVKAK+T RAA +AT+GKDSYATLSLGNWNYFAA+R+EKR PKLEATHLEKS
Sbjct: 601  DLELKNDDWVKAKETLRAASEATEGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKS 660

Query: 1548 KELYTKVLVQHPGNLYAANGAGVVLAEKGRFDISKDIFTQVHEAASGSVFVQMPDIWVNL 1369
            KELYTKVL QH  NLYAANGAGVV AEKG FD+SKDIFTQV EAASG++FVQMPD+W+NL
Sbjct: 661  KELYTKVLSQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINL 720

Query: 1368 AHVYFAQGHFGLAVKMYQNCLKRFCYSTDAQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 1189
            AHVYFAQG+F LAVKMYQNCL++F  +TD+Q+LLYLARTHYEAEQWQDCKK+LLRAIHLA
Sbjct: 721  AHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780

Query: 1188 PSNYTLRFDAGVAMQKFSASTLQKTKRSADEVRSTVAELKNAVRVFSQLSAASSYHIHGF 1009
            PSNYTLRFDAGV MQKFSASTLQK K+S DEVRSTV+EL+NAVR+F QLSAASS HIHGF
Sbjct: 781  PSNYTLRFDAGVVMQKFSASTLQKPKKSVDEVRSTVSELENAVRLFRQLSAASSLHIHGF 840

Query: 1008 DEKKIETHVGYCKHLLDAAKVHCEAAXXXXXXXXXRLEVARQVSLXXXXXXXXXEQRKFQ 829
            DEKKI+THV YC HLLDAA+VH +AA         + EVARQ++L         EQRKFQ
Sbjct: 841  DEKKIDTHVEYCSHLLDAARVHFKAAEHEEQKIKHKQEVARQMALAEEARRKAEEQRKFQ 900

Query: 828  LERRKQEDELKKVMQQEEQFLRIKEQWKTSLPMPSSKRKDRSQAEDDDXXXXXXXXXXXX 649
            LERR QEDELK+V QQEEQF R+KEQWK+S   P SKR++RS+ +D++            
Sbjct: 901  LERRMQEDELKRVRQQEEQFERVKEQWKSS--TPGSKRRERSEMDDEEGGHSEKRRRKGG 958

Query: 648  XXXXXXXXXXXRYXXXXXXXXXXXXXXXXXXDGNMINDQ-------QEDGGENAQDLLVA 490
                       RY                  +   +N +       ++D  EN QD L A
Sbjct: 959  KRRKKDKHSRSRYETEGXEAEMMDDQEEPEYEDANMNYREPMGQMNEQDEEENVQDHLAA 1018

Query: 489  AGLEDSDAEDETAPSSAVNRRRRAWSESDEDEQPEMMQRESSPPAGDRENSAELPESDGE 310
            AGLEDSDA++E A S+A  RRRRA+SESD+DEQPE  Q ESSP    RENSAEL +SDGE
Sbjct: 1019 AGLEDSDADEEAALSTA--RRRRAFSESDDDEQPE-HQPESSPV---RENSAEL-QSDGE 1071

Query: 309  IRE 301
             RE
Sbjct: 1072 GRE 1074