BLASTX nr result

ID: Cinnamomum24_contig00004796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00004796
         (233 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japo...    64   5e-08
gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indi...    64   5e-08
ref|XP_008345470.1| PREDICTED: uncharacterized protein LOC103408...    60   7e-07
ref|XP_007052155.1| Uncharacterized protein TCM_005591 [Theobrom...    59   2e-06
ref|XP_007052152.1| Uncharacterized protein TCM_005588 [Theobrom...    59   2e-06

>gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japonica Group]
          Length = 234

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 31/68 (45%), Positives = 42/68 (61%)
 Frame = -1

Query: 209 IHDHIRMQYVCKSWWSILKNTNRELPLLMMLPNDNEEDSDARDFFSLSKQKIHTVHLPEI 30
           I D++R++ VCKSW S L+  +R  P  +MLP D   +S  R F   S   +H + LP+ 
Sbjct: 23  IKDYVRLRAVCKSWRSFLRPRSR--PPWLMLPYDPCSESCVRGFLDASDGTVHEIDLPDT 80

Query: 29  RGKRCCGS 6
           RGKRCCGS
Sbjct: 81  RGKRCCGS 88


>gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indica Group]
          Length = 334

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 31/68 (45%), Positives = 42/68 (61%)
 Frame = -1

Query: 209 IHDHIRMQYVCKSWWSILKNTNRELPLLMMLPNDNEEDSDARDFFSLSKQKIHTVHLPEI 30
           I D++R++ VCKSW S L+  +R  P  +MLP D   +S  R F   S   +H + LP+ 
Sbjct: 23  IKDYVRLRAVCKSWRSFLRPRSR--PPWLMLPYDPCSESCVRGFLDASDGTVHEIDLPDT 80

Query: 29  RGKRCCGS 6
           RGKRCCGS
Sbjct: 81  RGKRCCGS 88


>ref|XP_008345470.1| PREDICTED: uncharacterized protein LOC103408391 [Malus domestica]
          Length = 406

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
 Frame = -1

Query: 224 SSICMIHDHIRMQYVCKSW-WSILKNT-----NRELPLLMMLPNDNEEDSDARDFFSLSK 63
           S I ++ D +    VCKSW W+  K         ++P LM LPN   +D+  R+F+SL+K
Sbjct: 28  SRIALMEDFVVFGAVCKSWRWAATKENFTSRLTHQVPFLM-LPNPKADDA-FREFYSLTK 85

Query: 62  QKIHTVHLPEIRGKRCCGS 6
            KIH ++LPE +GK CC S
Sbjct: 86  DKIHKLNLPEAKGKVCCSS 104


>ref|XP_007052155.1| Uncharacterized protein TCM_005591 [Theobroma cacao]
           gi|508704416|gb|EOX96312.1| Uncharacterized protein
           TCM_005591 [Theobroma cacao]
          Length = 410

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = -1

Query: 209 IHDHIRMQYVCKSWWSILKNTNRELPLLMMLPNDNEEDSDARDFFSLSKQKIHTVHLPEI 30
           + D  RM  VC+SW + LK+     P+ +ML    +EDSD R F+++S++    + LPEI
Sbjct: 34  VQDRTRMGTVCRSWQASLKDKQIIFPICLMLAE--KEDSDKRCFYNISEEIFIELELPEI 91

Query: 29  RGKRCCGS 6
           RG+RC GS
Sbjct: 92  RGRRCWGS 99


>ref|XP_007052152.1| Uncharacterized protein TCM_005588 [Theobroma cacao]
           gi|508704413|gb|EOX96309.1| Uncharacterized protein
           TCM_005588 [Theobroma cacao]
          Length = 410

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = -1

Query: 209 IHDHIRMQYVCKSWWSILKNTNRELPLLMMLPNDNEEDSDARDFFSLSKQKIHTVHLPEI 30
           + D  RM  VC+SW + LK+     P+ +ML    +EDSD R F+++S++    + LPEI
Sbjct: 34  VQDRTRMGTVCRSWQASLKDKQIIFPICLMLAE--KEDSDKRCFYNISEEIFIELELPEI 91

Query: 29  RGKRCCGS 6
           RG+RC GS
Sbjct: 92  RGRRCWGS 99


Top