BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00004771
         (412 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010272853.1| PREDICTED: RNA polymerase I-specific transcr...    88   3e-15
ref|XP_010272854.1| PREDICTED: RNA polymerase I-specific transcr...    87   6e-15
ref|XP_009618724.1| PREDICTED: RNA polymerase I-specific transcr...    83   6e-14
ref|XP_009773556.1| PREDICTED: RNA polymerase I-specific transcr...    83   8e-14
ref|XP_009619796.1| PREDICTED: RNA polymerase I-specific transcr...    82   1e-13
ref|XP_009777634.1| PREDICTED: RNA polymerase I-specific transcr...    82   1e-13
gb|KDO67299.1| hypothetical protein CISIN_1g0416051mg, partial [...    80   5e-13
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...    80   5e-13
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...    80   5e-13
ref|XP_006450178.1| hypothetical protein CICLE_v10010838mg [Citr...    80   5e-13
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...    79   2e-12
ref|XP_010649342.1| PREDICTED: RNA polymerase I-specific transcr...    78   2e-12
emb|CBI37506.3| unnamed protein product [Vitis vinifera]               78   2e-12
ref|XP_010033606.1| PREDICTED: RNA polymerase I-specific transcr...    77   5e-12
gb|KCW53301.1| hypothetical protein EUGRSUZ_J02557 [Eucalyptus g...    77   5e-12
gb|KDO71562.1| hypothetical protein CISIN_1g0157612mg, partial [...    75   2e-11
ref|XP_006467185.1| PREDICTED: RNA polymerase I-specific transcr...    75   2e-11
ref|XP_010088711.1| hypothetical protein L484_016497 [Morus nota...    74   5e-11
ref|XP_012470198.1| PREDICTED: RNA polymerase I-specific transcr...    70   4e-10
gb|KHF98889.1| RNA polymerase I-specific transcription initiatio...    70   4e-10

>ref|XP_010272853.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Nelumbo nucifera]
          Length = 631

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 48/79 (60%), Positives = 57/79 (72%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL     G  EM D  +SDSE+V HVR+ LK VSQGD ++YNQLI VM  T RL PD
Sbjct: 1   MGVELATERPGFYEMADIDVSDSELVYHVRDALKSVSQGDSDRYNQLIAVMHYTGRLAPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + AMLV SLKALSG++S I
Sbjct: 61  EVAMLVTSLKALSGSISYI 79


>ref|XP_010272854.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Nelumbo nucifera]
           gi|720053835|ref|XP_010272855.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3-like [Nelumbo nucifera]
          Length = 631

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 48/79 (60%), Positives = 56/79 (70%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL     G  EM D  +SDSE+V HVR+ LK VSQGD + YNQLI VM  T RL PD
Sbjct: 1   MGVELATDRPGFYEMVDVDVSDSELVYHVRDALKSVSQGDSDHYNQLIAVMHYTGRLAPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + AMLV SLKALSG++S I
Sbjct: 61  EVAMLVTSLKALSGSISYI 79


>ref|XP_009618724.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Nicotiana tomentosiformis]
          Length = 690

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 45/95 (47%), Positives = 62/95 (65%)
 Frame = -1

Query: 286 FRRYKFLADLVSDSVVMGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQY 107
           FR+Y  L++      +MGM LPA + G   M +  I+D+E+  HVR  LK   QGD ++Y
Sbjct: 60  FRQYSTLSN------IMGMVLPAEQAGYAVMENVEITDTELFYHVRGALKSALQGDPDKY 113

Query: 106 NQLIEVMICTERLEPDQEAMLVASLKALSGAVSSI 2
           NQL+ VM C ERL P++ A+LV  LKALSG+VS +
Sbjct: 114 NQLVGVMHCKERLVPEEVALLVTCLKALSGSVSCL 148


>ref|XP_009773556.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Nicotiana sylvestris]
          Length = 801

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 42/82 (51%), Positives = 57/82 (69%)
 Frame = -1

Query: 247 SVVMGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERL 68
           S +MGM LPA + G  EM +  I+D+E+  HVR  LK   +GD ++YNQL+ VM C ERL
Sbjct: 178 SNIMGMVLPAEQAGYAEMENVEITDTELFYHVRGALKSALEGDPDKYNQLVGVMHCKERL 237

Query: 67  EPDQEAMLVASLKALSGAVSSI 2
            P++ A+LV  LKALSG+VS +
Sbjct: 238 VPEEVALLVTCLKALSGSVSCL 259


>ref|XP_009619796.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like isoform X1 [Nicotiana tomentosiformis]
           gi|697131478|ref|XP_009619797.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3-like isoform X1 [Nicotiana tomentosiformis]
          Length = 620

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 42/79 (53%), Positives = 55/79 (69%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MGM LPA + G  EM +  I+D+E+  HVR  LK   QGD ++YNQL+ VM C ERL P+
Sbjct: 1   MGMVLPAEQAGYAEMENVEITDTELFYHVRGALKSALQGDPDKYNQLVGVMHCKERLVPE 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV  LKALSG+VS +
Sbjct: 61  EVALLVTCLKALSGSVSCL 79


>ref|XP_009777634.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3 isoform X1 [Nicotiana sylvestris]
          Length = 619

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 42/79 (53%), Positives = 55/79 (69%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MGM LPA + G  EM +  I+D+E+  HVR  LK   QGD ++YNQL+ VM C ERL P+
Sbjct: 1   MGMVLPAEQAGYAEMENVEITDTELFYHVRGALKSALQGDRDKYNQLVGVMHCKERLVPE 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV  LKALSG+VS +
Sbjct: 61  EVALLVTCLKALSGSVSCL 79


>gb|KDO67299.1| hypothetical protein CISIN_1g0416051mg, partial [Citrus sinensis]
          Length = 313

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MGMELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  + RL+PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MGMELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  + RL+PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MGMELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  + RL+PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_006450178.1| hypothetical protein CICLE_v10010838mg [Citrus clementina]
           gi|557553404|gb|ESR63418.1| hypothetical protein
           CICLE_v10010838mg [Citrus clementina]
          Length = 198

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MGMELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  + RL+PD
Sbjct: 1   MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/79 (54%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+ELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  + RL+PD
Sbjct: 1   MGVELPIDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_010649342.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor rrn3 [Vitis vinifera]
          Length = 627

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/79 (54%), Positives = 53/79 (67%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL     G  EM +   SDSE+V HVR+ L+ V  GD + Y+QLI V+   ERL PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV SLKALSGAVS I
Sbjct: 61  EVALLVTSLKALSGAVSCI 79


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/79 (54%), Positives = 53/79 (67%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL     G  EM +   SDSE+V HVR+ L+ V  GD + Y+QLI V+   ERL PD
Sbjct: 1   MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV SLKALSGAVS I
Sbjct: 61  EVALLVTSLKALSGAVSCI 79


>ref|XP_010033606.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor rrn3 [Eucalyptus grandis]
           gi|629086945|gb|KCW53302.1| hypothetical protein
           EUGRSUZ_J02557 [Eucalyptus grandis]
          Length = 633

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 43/79 (54%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL     G  EM D   +D+E+V HVR  LK VS GD E Y++LI VM   ERL PD
Sbjct: 1   MGVELANERAGFLEMEDVNFTDNELVYHVRTALKSVSLGDSESYDELIGVMHHRERLSPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV  LKALSG VS I
Sbjct: 61  EVALLVTCLKALSGTVSCI 79


>gb|KCW53301.1| hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
          Length = 634

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 43/79 (54%), Positives = 51/79 (64%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL     G  EM D   +D+E+V HVR  LK VS GD E Y++LI VM   ERL PD
Sbjct: 1   MGVELANERAGFLEMEDVNFTDNELVYHVRTALKSVSLGDSESYDELIGVMHHRERLSPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV  LKALSG VS I
Sbjct: 61  EVALLVTCLKALSGTVSCI 79


>gb|KDO71562.1| hypothetical protein CISIN_1g0157612mg, partial [Citrus sinensis]
           gi|641852698|gb|KDO71563.1| hypothetical protein
           CISIN_1g0157612mg, partial [Citrus sinensis]
          Length = 217

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/79 (53%), Positives = 49/79 (62%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG ELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  +  L+PD
Sbjct: 1   MGRELPKDSAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGCLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_006467185.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Citrus sinensis]
          Length = 588

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/79 (53%), Positives = 49/79 (62%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG ELP       EM D  ISD E+V HVR  L  V  GD++ YNQL+ VM  +  L+PD
Sbjct: 1   MGRELPKDSAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGCLDPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
             A+L  SLKALSGAVS I
Sbjct: 61  NRALLETSLKALSGAVSYI 79


>ref|XP_010088711.1| hypothetical protein L484_016497 [Morus notabilis]
           gi|587846406|gb|EXB36892.1| hypothetical protein
           L484_016497 [Morus notabilis]
          Length = 616

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYISDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERLEPD 59
           MG+EL   E G  E++D   +D ++V HVR+ L  VS GD ++YN+L+ VM     L PD
Sbjct: 1   MGVELRNGEAGFHELDDADFTDYDLVYHVRDALTSVSMGDSDKYNELVAVMHHRGPLAPD 60

Query: 58  QEAMLVASLKALSGAVSSI 2
           + A+LV SLKALSGAVS I
Sbjct: 61  EVALLVTSLKALSGAVSYI 79


>ref|XP_012470198.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3 [Gossypium raimondii]
           gi|823140744|ref|XP_012470199.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3 [Gossypium raimondii]
           gi|823140746|ref|XP_012470200.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3 [Gossypium raimondii]
           gi|823140748|ref|XP_012470201.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3 [Gossypium raimondii]
           gi|823140750|ref|XP_012470202.1| PREDICTED: RNA
           polymerase I-specific transcription initiation factor
           RRN3 [Gossypium raimondii] gi|763751257|gb|KJB18645.1|
           hypothetical protein B456_003G064600 [Gossypium
           raimondii] gi|763751258|gb|KJB18646.1| hypothetical
           protein B456_003G064600 [Gossypium raimondii]
          Length = 629

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYI---SDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERL 68
           MG+ELP       EM +D +   +DSE+VSHV+  L  V  GD+  YNQL+ VM  ++ L
Sbjct: 1   MGLELPKYP----EMEEDQVFNFTDSEIVSHVKQALASVLSGDNNSYNQLVGVMHHSKHL 56

Query: 67  EPDQEAMLVASLKALSGAVSSI 2
            PD+ A+L  +LKAL+GAVSSI
Sbjct: 57  APDEVALLETTLKALAGAVSSI 78


>gb|KHF98889.1| RNA polymerase I-specific transcription initiation factor RRN3
           [Gossypium arboreum]
          Length = 523

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
 Frame = -1

Query: 238 MGMELPAVEVGLDEMNDDYI---SDSEVVSHVRNVLKLVSQGDDEQYNQLIEVMICTERL 68
           MG+ELP       EM +D +   +DSE+VSHV+  L  V  GD+  YNQL+ VM  ++ L
Sbjct: 1   MGLELPKYP----EMEEDQVFNFTDSEIVSHVKQALASVLSGDNNSYNQLVGVMHHSKHL 56

Query: 67  EPDQEAMLVASLKALSGAVSSI 2
            PD+ A+L  +LKAL+GAVSSI
Sbjct: 57  APDEVALLETTLKALAGAVSSI 78