BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum24_contig00000931
         (2021 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   638   e-180
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   625   e-176
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   608   e-171
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   601   e-169
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,...   600   e-168
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,...   600   e-168
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   600   e-168
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,...   597   e-167
ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,...   597   e-167
gb|AKC88737.1| sigma factor [Francoa sonchifolia]                     596   e-167
ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,...   594   e-166
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   593   e-166
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   592   e-166
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   588   e-165
ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,...   588   e-165
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,...   588   e-165
gb|AKC88745.1| sigma factor [Melianthus villosus]                     588   e-165
ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,...   588   e-165
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   584   e-164
ref|XP_008376694.1| PREDICTED: RNA polymerase sigma factor sigE,...   583   e-163

>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  638 bits (1646), Expect = e-180
 Identities = 343/518 (66%), Positives = 399/518 (77%), Gaps = 3/518 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSS+S+TP+GL SRF+ H + L+RP  LAFKTDK+KD  LV+ HE IPLP+D P
Sbjct: 1    MGVVTVSSSSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTP 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K+                  V +D AS CT ++DYN+ AAKLE+IYK SP T+ S  DD+
Sbjct: 61   KENQKRLRRATKPSKRVK-VVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDT 119

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            + + ++RRR  K++ E D K  KE   NV+RNH            IALR+K   KEE   
Sbjct: 120  DRVGRRRRRTRKKLGEADRKTGKESSDNVIRNHNKNKRLSLDRR-IALRRK---KEEGAV 175

Query: 1156 SVSRRKDG-EASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKAL 980
             +S  K+G +   +VD+LV  YS++TDL SLDWKKMKIPPVL SSEH+ LFKLMQPM AL
Sbjct: 176  QLSGVKEGSKEDGDVDKLVGEYSVSTDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMNAL 235

Query: 979  IQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINKY 800
             Q+KE LH DLGREP+D ELAD+TNMSV Q+RR IEVG AARN+LIKHNLRLVLFVINKY
Sbjct: 236  FQMKENLHRDLGREPTDGELADSTNMSVFQVRRCIEVGRAARNRLIKHNLRLVLFVINKY 295

Query: 799  YQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTRV 620
            +QE A+G KFQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH IMRS+T SSFTRV
Sbjct: 296  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTLSSFTRV 355

Query: 619  PFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARHA 440
             FGLESVR+EIQ+AKLEL+F+L R PTE+EI+ KVGISP RYH+V++ASK V SLH+RHA
Sbjct: 356  SFGLESVRVEIQRAKLELMFELERLPTEEEIIKKVGISPERYHEVIKASKPVFSLHSRHA 415

Query: 439  VTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 260
            +TQEEFINGITDI+GVGGDKRRQPA            LKPKESLVIRQRYGLDGKGDRTL
Sbjct: 416  ITQEEFINGITDIEGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 475

Query: 259  GEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            GEIAGNLNISREMVRK+EVKALMKLKHPTRVDYLR +I
Sbjct: 476  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 513


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  625 bits (1612), Expect = e-176
 Identities = 338/520 (65%), Positives = 397/520 (76%), Gaps = 5/520 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSAS--RTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPID 1517
            MGVVTVSSSAS  RTP GL ++F+ H + LRRP  LAFK DK+K+  LV+PHE IPLPI+
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 1516 APKDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVAD 1340
              KD                 AVSTD  SPC+ +LDYNEAAAKLENIYK SP T+ S A+
Sbjct: 61   TSKDHKKRLRRASKPSKRVK-AVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAE 119

Query: 1339 DSNHLVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEP 1163
            D   +V++ R+  KR+   D+K EKE+  NVVR H           RIAL K  + +E+ 
Sbjct: 120  DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSK--MKQEKA 177

Query: 1162 MGSVSRRKDGE-ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMK 986
            + S+ +++D +    N+D LV  YS +TDLVSLDWKKMKIPPVL  SEH+ LFKLMQPMK
Sbjct: 178  VASIQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMK 237

Query: 985  ALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVIN 806
             L++VK+ L +DLGREP+D ELA+A +MS +Q+RR++EVG AARNKLIKHNLRLVLFVIN
Sbjct: 238  GLLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVIN 297

Query: 805  KYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFT 626
            KY+QE A+G KFQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH IMRS+T SSFT
Sbjct: 298  KYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFT 357

Query: 625  RVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHAR 446
            RV FGLESVR+EIQ+AKLELLF L R PTE+EI+ KVGISP RYH+VMRASK VLSLHAR
Sbjct: 358  RVSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHAR 417

Query: 445  HAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDR 266
            HA TQEE+INGITD++GVGGD+ RQ A            LKPKESLV+RQRYGLDGKGDR
Sbjct: 418  HATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDR 477

Query: 265  TLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            TLGEIAGNL+ISREMVRK+EVKALMKLKHP RVDYLR +I
Sbjct: 478  TLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYI 517


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  608 bits (1569), Expect = e-171
 Identities = 330/520 (63%), Positives = 392/520 (75%), Gaps = 4/520 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVV+VSSSA+RTP+GL ++F+T   + RRP  +AFK DKS ++ LV+P E I LPI+  
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K+                  V TD  SPCT ++DYNEAAAKLENIYK SP T +S  ++ 
Sbjct: 61   KEHPKRRGKAKKDPKIVNH-VFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEV 119

Query: 1333 NHLVQKRRRMSKRIVEGDEK--KEKEMVNVVRNHXXXXXXXXXXXRIALRKKNVDKEEPM 1160
               ++ RR+  KR  E DEK     + + VVRN            RIAL+K    +E+P+
Sbjct: 120  EGKIKGRRQRRKRSKESDEKGVNSNDQI-VVRNQTNRIKRLSLDNRIALKKNR--EEKPV 176

Query: 1159 GSVSRRKDGE-ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKA 983
             SV R+K  E  S  +DRLV  YS +TDLVSLDW+KMKIPPVL S EH+ LFKLMQPMKA
Sbjct: 177  VSVRRKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKA 236

Query: 982  LIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINK 803
            L+Q KE L +DLGR+P++ ELA+ATNMS  Q+R+++EVG AARNKLIKHNLRLVLF INK
Sbjct: 237  LLQAKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINK 296

Query: 802  YYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTR 623
            Y+Q+ A+G +FQDLCQAG KGLI +IDRFE +R  RLSTY+LFWIRH I+RS+T SSFTR
Sbjct: 297  YFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTR 356

Query: 622  VPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARH 443
            V FGLESVR+EIQ+AKLELLF+L REPTE+EI+ KVGISP RY +VMRASK V SLH+RH
Sbjct: 357  VSFGLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRH 416

Query: 442  AVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRT 263
            +VTQEEFINGITDIDGVGGD RRQPA            LKPKESLVIRQRYGLDGKGDRT
Sbjct: 417  SVTQEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 476

Query: 262  LGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            LGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR ++V
Sbjct: 477  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 516


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  601 bits (1550), Expect = e-169
 Identities = 327/520 (62%), Positives = 393/520 (75%), Gaps = 5/520 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSASR+P+GL SRF+T    L+RP  ++FK DK+K++TL++P ESI L I+  
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRS-PTNASVADDS 1334
            K+                 AV+ + ASP T +LDY+EAAAKLE+IYKRS  T +S  +  
Sbjct: 61   KENEKRSRRVSKRSERVH-AVAIE-ASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQ 118

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            +HLV++R R  KRIVEGDE+ +KE+  NVV+N            RIAL K   +KE  M 
Sbjct: 119  DHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLK---NKEGEMV 175

Query: 1156 SVSRR---KDGEASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMK 986
            + S R   K+      +D+LV  YS ATDL SLDWKKMKIPPVL SSEH  LFKLMQPMK
Sbjct: 176  ASSERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMK 235

Query: 985  ALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVIN 806
            A++QVKE L  DLGREP+D E+A+ATNM   ++R+ +EVG AARNKLIKHNLRLVLFV+N
Sbjct: 236  AILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMN 295

Query: 805  KYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFT 626
            KY+Q+ A+G +FQDLCQAG KGLI +IDRFE  R  RLSTY LFWIRH I+RS+TTSSFT
Sbjct: 296  KYFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFT 355

Query: 625  RVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHAR 446
            +VPFGLES+R+EIQKAKLELLF+L R PT++EI+ +VG+SP RYH+VM+ SK V SLHAR
Sbjct: 356  KVPFGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHAR 415

Query: 445  HAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDR 266
            +  TQEE INGITD+DGV GDKR+QPA            LKPKESLVIRQRYGLDGKGDR
Sbjct: 416  NKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 475

Query: 265  TLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            TLGEIAGNLNISREMVRK+EVKALMKLKHPTRVDY+R +I
Sbjct: 476  TLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515


>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Sesamum indicum]
          Length = 518

 Score =  600 bits (1546), Expect = e-168
 Identities = 321/517 (62%), Positives = 387/517 (74%), Gaps = 2/517 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSA+RTP+GL +R+ T  S  RR   L+FK DK+K+  L++P ES+ LP++A 
Sbjct: 1    MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAK 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K+                 AVSTD ASP T DLDYNEAAAKLE IYKRSP T  S+ +  
Sbjct: 61   KEKEKRSRKVKKLVERVS-AVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVK 119

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMVNVVRNHXXXXXXXXXXXRIALR-KKNVDKEEPMG 1157
            +  V++RR + KR  E +E ++K   +VVR+            RIAL+  K VD      
Sbjct: 120  DQRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSS 179

Query: 1156 SVSRRKDGEASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKALI 977
               +++  +    +DRLV  YS +TDLVSLDWKKMKIPPVL SSEH+ LFKLMQPMKA++
Sbjct: 180  QKRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAIL 239

Query: 976  QVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINKYY 797
            QVKE L  DLGRE +D ELA+AT  + +Q+R+ +EVG AARNKLIKHNLRLVLFV+NKY+
Sbjct: 240  QVKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYF 299

Query: 796  QEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTRVP 617
            Q+ ++G +FQDLCQAG KGLI +IDRFE KR  RLSTY+LFWIRH I+RS+T SSFT+V 
Sbjct: 300  QDFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKVS 359

Query: 616  FGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARHAV 437
            FGLESVR+EIQKAKLELLF+L R P+++EIV++VGISP RYH+VMR SK + SLHARHAV
Sbjct: 360  FGLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGISPERYHEVMRVSKPISSLHARHAV 419

Query: 436  TQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLG 257
            TQEEFINGI+D+D V GDKRRQPA            LKPKESLVIRQRYGLDGKGDRTLG
Sbjct: 420  TQEEFINGISDVDDVEGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 479

Query: 256  EIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            EIAGNLNISREMVRK+EVKALMKLKHP R+DYLR +I
Sbjct: 480  EIAGNLNISREMVRKHEVKALMKLKHPARIDYLRRYI 516


>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana sylvestris]
          Length = 519

 Score =  600 bits (1546), Expect = e-168
 Identities = 324/519 (62%), Positives = 386/519 (74%), Gaps = 4/519 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSASR+P+GL +RF+ H   L+RP  ++FK DK+K +TLV+P ESI LPI+  
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTD-GASPCTADLDYNEAAAKLENIYKRS-PTNASVADD 1337
            K+                 AVS D  AS    +LDY+EAAAKLE+IYKRS  T++S  + 
Sbjct: 61   KENEKRSRRVSKRTERVH-AVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 1336 SNH-LVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEP 1163
             +H +V++R+R  KRIVEGDE+ +K +  NVV+N            RIAL K    +   
Sbjct: 120  KDHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 179

Query: 1162 MGSVSRRKDGEASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKA 983
                   K+      +D+LV  YS ATDL SLDWKKMKIPPVL SSEH+ LFKLMQPMKA
Sbjct: 180  SSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 239

Query: 982  LIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINK 803
            ++QVKE L  DLGREP+D E A+ATN+   ++R+N+EVG AARNKLIKHNLRLVLFVINK
Sbjct: 240  ILQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 299

Query: 802  YYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTR 623
            Y+Q+ A+G KFQDLCQAG KGLI +IDRFE  R  RLSTY LFWIRH I+RS+TTSSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359

Query: 622  VPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARH 443
            VPFGLES+R+EIQKAKL+LLF+L R PT++EI+ +V +SP RYH+VM+ SK V SLHARH
Sbjct: 360  VPFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARH 419

Query: 442  AVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRT 263
              TQEE INGITD+DGV GDKRRQPA            LKPKESLVIRQRYGLDGKGDRT
Sbjct: 420  MTTQEELINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 479

Query: 262  LGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            LGEIAGNLNISREMVRK+EVKALMKLKHPTRVDYLR +I
Sbjct: 480  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 518


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  600 bits (1546), Expect = e-168
 Identities = 323/522 (61%), Positives = 391/522 (74%), Gaps = 6/522 (1%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSASRTP+GL ++     S+LR+P  +AFKTD++  + LV+P E IPLPI+  
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSPTNASVAD--D 1337
            K                  A +TD ASPCT ++DYNEAAAKLEN+YKRSP   + +D  D
Sbjct: 61   KKHQKRLGKARKLAKSVKSA-TTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVED 119

Query: 1336 SNHLVQKRRRMSKRIVEGDEKKEKEMVN--VVRNHXXXXXXXXXXXRIALRKKNVDKEEP 1163
             + L+++ R+  K+  E D  K++   +  VVRN            R+AL K N D E+ 
Sbjct: 120  VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVAL-KWNKD-EKV 177

Query: 1162 MGSVSRRKDGEASYN--VDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPM 989
            + S+ R++    + N  ++ LV  YS +TDLVSLDWKKMKIPPVL+SSEH+ LFKLMQPM
Sbjct: 178  ISSIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 237

Query: 988  KALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVI 809
            K L++VKE L +DLGREP++ ELA+ATNMSV+Q+++++EVG AAR+KLIKHNLRLVLFV+
Sbjct: 238  KGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVM 297

Query: 808  NKYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSF 629
            NKY+Q+ A+G KFQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSF
Sbjct: 298  NKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSF 357

Query: 628  TRVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHA 449
            TRV FGLESVR EIQKAKL +LF L R PTEDEI+ KVGISP RYH+VMRASK V SLH+
Sbjct: 358  TRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHS 417

Query: 448  RHAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 269
            RH  TQEEFINGITD+DGV GD R++PA            LKPKESLVIRQRYGLDGKGD
Sbjct: 418  RHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 477

Query: 268  RTLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            RTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR ++V
Sbjct: 478  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 519


>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 519

 Score =  597 bits (1539), Expect = e-167
 Identities = 321/519 (61%), Positives = 388/519 (74%), Gaps = 4/519 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSASR+P+GL + F+ H   L+RP  ++FK DK+K +TLV+P ESI LPI+  
Sbjct: 1    MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTD-GASPCTADLDYNEAAAKLENIYKRS-PTNASVADD 1337
            K+                 AVS D  ASP T +LDY+EAAAKLE+IYKRS  T++S  + 
Sbjct: 61   KENEKRSRRVSKRTERVH-AVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 1336 SNH-LVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEP 1163
             +H +V++R+R  KRI+EG+E+ +K +  NVV+N            RIAL K    +   
Sbjct: 120  KDHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 179

Query: 1162 MGSVSRRKDGEASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKA 983
                   K+      +D+LV  YS ATDL SLDWKKMKIPPVL SSEH+ LFKLMQPMKA
Sbjct: 180  SSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 239

Query: 982  LIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINK 803
            ++QVKE L  DLGREP+D E+A+ATN+   ++R+N+EVG AARNKLIKHNLRLVLFVINK
Sbjct: 240  ILQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 299

Query: 802  YYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTR 623
            Y+Q+ A+G KFQDLCQAG KGLI +IDRFE  R  RLSTY LFWIRH I+RS+TTSSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359

Query: 622  VPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARH 443
            VPFGLES+R+EIQKAKL+LLF+L R PT++EI+ +V +SP RYH+VM+ SK V SLHARH
Sbjct: 360  VPFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARH 419

Query: 442  AVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRT 263
              TQEEFINGITD+DGV G KR+QPA            LKPKESLVIRQRYGLDGKG+RT
Sbjct: 420  MTTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRT 479

Query: 262  LGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            LGEIAGNLNISREMVRK+EVKALMKLKHPTRVDYLR +I
Sbjct: 480  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 518


>ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Prunus mume]
          Length = 507

 Score =  597 bits (1539), Expect = e-167
 Identities = 324/522 (62%), Positives = 393/522 (75%), Gaps = 6/522 (1%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSASRTP+GL ++  +  S+LR+P  +AFKTD++  + LV+P E IPLPI+  
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTSQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIEXX 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSPTNASVAD--D 1337
                               + +TD ASPCT ++DYNEAAAKLEN+YKRSP   + +D  D
Sbjct: 61   XXXXXK-------------SATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVED 107

Query: 1336 SNHLVQKRRRMSKRIVEGDEKKEKEMVN--VVRNHXXXXXXXXXXXRIALRKKNVDKEEP 1163
             + L+++ R+  K+  E D  KE+   +  VVRN            R+ L K N D E+ 
Sbjct: 108  VDGLMRRGRKRRKKTSESDADKEENRTSNTVVRNRTKKAKRLSLDKRVTL-KWNKD-EKV 165

Query: 1162 MGSVSRRKDGEASYN--VDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPM 989
            + S+ R++    + N  ++ LV  YS +TDLVSLDWKKMKIPPVL+SSEH+ LFKLMQPM
Sbjct: 166  IASIVRKRKSRKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 225

Query: 988  KALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVI 809
            K L++VKE L +DLGREP++ ELA+ATNMSV+Q+++++EVG AAR+KLIKHNLRLVLFV+
Sbjct: 226  KGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVM 285

Query: 808  NKYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSF 629
            NKY+Q+ A+G KFQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSF
Sbjct: 286  NKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSF 345

Query: 628  TRVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHA 449
            TRV FGLESVR EIQKAKL +LF L R PTEDEI+ KVGISP RYH+VMRASK V SLH+
Sbjct: 346  TRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHS 405

Query: 448  RHAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 269
            RH  TQEEFINGITD+DGV GD R++PA            LKPKESLVIRQRYGLDGKGD
Sbjct: 406  RHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 465

Query: 268  RTLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            RTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR ++V
Sbjct: 466  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV 507


>gb|AKC88737.1| sigma factor [Francoa sonchifolia]
          Length = 513

 Score =  596 bits (1537), Expect = e-167
 Identities = 324/520 (62%), Positives = 388/520 (74%), Gaps = 4/520 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSS +R+P+GL ++F+TH  +L+RPS ++ K DK+ +  LV+P E IPLPI  P
Sbjct: 1    MGVVTVSSSPARSPLGLSTKFSTHRCTLKRPSIVSLKADKTNNIALVAPQEQIPLPIQTP 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K                  AVSTD  SPCT +LD+NEAAAKLENIYK SP T+ S  +D 
Sbjct: 61   KKQRKRLGRAIKTSKRVK-AVSTDVTSPCTLELDFNEAAAKLENIYKLSPPTDCSDTEDI 119

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            + +  + R   KR+  GD+  EK    NVVRN            RI+L +   +KE    
Sbjct: 120  DGMKSRHR---KRMNGGDDTGEKRTSDNVVRNRTKKVKRLSLDRRISLIR---NKEGDAD 173

Query: 1156 SVSRRKDGEAS--YNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKA 983
            S SR K  + +  Y+VD LV  YS +TDLVSLDWKKMKIPPVLSS EH+ LFKLMQPMK 
Sbjct: 174  SSSRSKIDQKNENYSVDWLVREYSASTDLVSLDWKKMKIPPVLSSLEHAWLFKLMQPMKE 233

Query: 982  LIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINK 803
            L+Q+KE LH+D  REP+D ELA+A NM+V++MR++++VG AARNKLIKHNLRLVLFV+NK
Sbjct: 234  LLQLKENLHKDFSREPTDYELAEALNMNVIEMRKDMDVGRAARNKLIKHNLRLVLFVMNK 293

Query: 802  YYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTR 623
            Y+Q+ A+G +FQDLCQAG KGLI +IDRFE KR +RLSTY LFWIRH I RSLT SSFTR
Sbjct: 294  YFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRVRLSTYGLFWIRHAITRSLTLSSFTR 353

Query: 622  VPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARH 443
            V FGLESVR+EIQ+AKLELLF+L R PTEDEI+ KVGIS  RYH+VMRA+K V SLHA+H
Sbjct: 354  VSFGLESVRVEIQRAKLELLFELHRLPTEDEIIEKVGISFERYHEVMRAAKPVYSLHAKH 413

Query: 442  AVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRT 263
             +T EEFIN +TD+DG+ GD+RRQPA            LKPKESLVIRQRYGLDGKGDRT
Sbjct: 414  MITHEEFINALTDVDGIHGDQRRQPALFRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 473

Query: 262  LGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            LGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR ++V
Sbjct: 474  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLV 513


>ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Populus euphratica]
          Length = 512

 Score =  594 bits (1531), Expect = e-166
 Identities = 325/519 (62%), Positives = 386/519 (74%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVV+VSSSASRTP+GL ++F+T+ S+ +RP  +AFK DKS + + V+PHE IPLPI+  
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSSNPSFVAPHEQIPLPIETT 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K                  AV T+  SPCT  +DYNEAAAKLENIYK SP T+ S  +D+
Sbjct: 61   KGKKRLGKSKKSSNRLK--AVRTE-VSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDA 117

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMVNV-VRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            + ++++ R+  ++I EGD++ E     + VRN            RI+LR KN  +E+ + 
Sbjct: 118  SGVIRRGRQRKRKISEGDKEAEDRTSKIIVRNRAKKAKRLSLEKRISLRIKN--EEKLVT 175

Query: 1156 SVSRRKDGE-ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKAL 980
            S  +RKD +  +  +D L+  YS +TDLVSLDWKKMKIPPVL+SSEH  LFKLMQPMKAL
Sbjct: 176  SAGKRKDRKNENEKIDELLREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKAL 235

Query: 979  IQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINKY 800
            +QVKE L E+LGREP+DVELA AT M VLQ+R+ I VG AARNKLIKHNLRLVLFVI KY
Sbjct: 236  LQVKEHLQENLGREPTDVELAKATTMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKY 295

Query: 799  YQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTRV 620
            +Q+ A+G KFQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSFTRV
Sbjct: 296  FQDFANGTKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355

Query: 619  PFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARHA 440
             FGLES+R EIQKAKLEL F L R+P EDEI+ KV ISP RYH+V RASK VLSLH+RH 
Sbjct: 356  SFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHK 415

Query: 439  VTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 260
             TQEEFI GI D+D  GGD RRQ A            LKPKESLV+RQRYGLDGKGDRTL
Sbjct: 416  TTQEEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTL 473

Query: 259  GEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            GEIAGNLNISREMVRK+EVKALMKLKHPTRVDYLR ++V
Sbjct: 474  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYVV 512


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  593 bits (1528), Expect = e-166
 Identities = 324/519 (62%), Positives = 387/519 (74%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVV+VSSSASRTP+GL ++F+T+ S+ +RP  +AFK +KS +++LV+PHE IPLP++  
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K                  AV T+  SPCT  +DYNEAAAKLENIYK SP T+ S  +D+
Sbjct: 61   KGKKRLGKSKKSSNRLK--AVRTE-VSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDA 117

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMVNV-VRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            + ++++ R+  ++I EGD++ E     + VRN            RI+LR KN  +E+ + 
Sbjct: 118  SGVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKN--EEKLVS 175

Query: 1156 SVSRRKDGE-ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKAL 980
            S  +RKD +  +  +D LV  YS +TDLVSLDWKKMKIPPVL+SSEH  LFKLMQPMKAL
Sbjct: 176  SAGKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKAL 235

Query: 979  IQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINKY 800
            +QVKE L E+LG EP+DVELA ATNM VLQ+R+ I VG AARNKLIKHNLRLVLFVI KY
Sbjct: 236  LQVKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKY 295

Query: 799  YQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTRV 620
            +Q+ A+G KFQD CQAG KGLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSFTRV
Sbjct: 296  FQDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355

Query: 619  PFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARHA 440
             FGLES+R EIQKAKLEL F L R+P EDEI+ KV ISP RYH+V RASK VLSLH+RH 
Sbjct: 356  SFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHK 415

Query: 439  VTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 260
             TQEEFI GI D+D  GGD RRQ A            LKPKESLV+RQRYGLDGKGDRTL
Sbjct: 416  TTQEEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTL 473

Query: 259  GEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            GEIAGNLNISREMVRK+EVKALMKLKHPTRVDYLR ++V
Sbjct: 474  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYVV 512


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            lycopersicum]
          Length = 516

 Score =  592 bits (1525), Expect = e-166
 Identities = 322/519 (62%), Positives = 383/519 (73%), Gaps = 4/519 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVSSSASR+P+GL SRF+     L+RP  ++FK D +K++TLVSP ESI  PI+  
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSPTNASVADD-S 1334
            K+                    T  A P T +LDY+EAAAKLE+IYKRS   AS   +  
Sbjct: 61   KENEKRSRRVSKRTERVHAV--TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVK 118

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            +HLV++R R  KRIVE DE+ +KE+V NVV+N            RIAL K    K   + 
Sbjct: 119  DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKM--LA 176

Query: 1156 SVSRRKDGEASYN--VDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKA 983
            S  RRK  E + +  +D+LV  YS ATDL SLDWKKMKIPPVL SSEH+ LFKLMQPMKA
Sbjct: 177  SSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKA 236

Query: 982  LIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINK 803
            ++QVKE L  DLGREP+D E+A+ATNM   ++R+ +E G AARNKLIKHNLRLVLFV+NK
Sbjct: 237  ILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNK 296

Query: 802  YYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTR 623
            Y+Q+ A+  +FQDLCQAG KGLI +IDRFE  R  RLSTY LFWIRH I+R +TTSSFT+
Sbjct: 297  YFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTK 356

Query: 622  VPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARH 443
            VPFGLES+R+EIQKAKLELLF+L R PT+DEI+ +VG SP RYH+VM+ SK + SLHAR+
Sbjct: 357  VPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARN 416

Query: 442  AVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRT 263
              TQEE INGITD+DGV GDKR+QPA            LKPKESLVIRQRYGLDGKGDRT
Sbjct: 417  KTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 476

Query: 262  LGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            LGEIAGNLNISREMVRK+EVKALMKLKHPTRVDY+R +I
Sbjct: 477  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  588 bits (1517), Expect = e-165
 Identities = 326/522 (62%), Positives = 388/522 (74%), Gaps = 6/522 (1%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRF-ATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDA 1514
            MGVVTVSSS SRTP+GL +   ++  S+LR+P  +AF+TDKS    LV+P E +PLPI+ 
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 1513 PKDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADD 1337
             K                  A+  + A  C  +LDYNEAAAKLEN+YKRSP T AS  ++
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEE-APTCDLELDYNEAAAKLENLYKRSPETEASDVEN 119

Query: 1336 SNHLVQKR-RRMSKRIVEGDEKKEKEMVN--VVRNHXXXXXXXXXXXRIALRKKNVDKEE 1166
             + L+ KR R+  K+I E D+K EK   +  VVR+            R+AL K N D++ 
Sbjct: 120  VDGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVAL-KWNKDEKV 178

Query: 1165 PMGSVSRRKDGEASYNV-DRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPM 989
                V +RKD  +   + + LV  YS +TDLVSLDWKKM+IPPVLSSSEH+ LFKLMQPM
Sbjct: 179  AASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPM 238

Query: 988  KALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVI 809
            K L++VKE L +DLGREP+  ELA+ATNM+V+Q++R++EVG AARNKLIKHNLRLVLFVI
Sbjct: 239  KGLLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVI 298

Query: 808  NKYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSF 629
            NKY+Q+ A+G KFQDLCQAG KGLI +IDRFE +R  RLSTY LFWIRH I+RS+T SSF
Sbjct: 299  NKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSF 358

Query: 628  TRVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHA 449
            TRV FGLESVR EIQKAKLE+L  L R PTEDEI+ KVGISP RYH+VMRASK V SL++
Sbjct: 359  TRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNS 418

Query: 448  RHAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 269
            RH+VTQEEFINGITD+DGV GD RR+PA            LKPKESLVIRQRYGLDGKGD
Sbjct: 419  RHSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGD 478

Query: 268  RTLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            RTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR +IV
Sbjct: 479  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV 520


>ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  588 bits (1516), Expect = e-165
 Identities = 319/522 (61%), Positives = 392/522 (75%), Gaps = 6/522 (1%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVS+SA+RTP+GL ++  +  S  R+P  +AFKTD+S  + LV+P  +IPLPI+  
Sbjct: 1    MGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGNIPLPIETR 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTA-DLDYNEAAAKLENIYKRSPTNASVAD-- 1340
            K                  + +TD A+PCT  ++DYNEAAAKLEN+YKRSP   +  D  
Sbjct: 61   KKLQKRIGKARKLAKSVK-STATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVE 119

Query: 1339 DSNHLVQKRRRMSKRIVEGDEKKEKEMVN--VVRNHXXXXXXXXXXXRIALRKKNVDKEE 1166
            D++ L+++ R+  K+  E D +KE++  +  VVR+            R+AL K N D E+
Sbjct: 120  DADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVAL-KWNKD-EK 177

Query: 1165 PMGSVSRRKDGE-ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPM 989
             + SV +RKD +  +  ++ LV  YS +TDLVSLDWKKMKIPPVL+SSEH+ LFKLMQPM
Sbjct: 178  VVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 237

Query: 988  KALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVI 809
            K L +V+E L +DLG EP++ ELA+ATNMSV+Q++++ EVG AARNKLIKHNLRLVLFVI
Sbjct: 238  KGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVI 297

Query: 808  NKYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSF 629
            NKY+Q+ A+G KFQDLCQAG +GLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSF
Sbjct: 298  NKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSF 357

Query: 628  TRVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHA 449
            TRV FGLESVR EIQKAKLE++F L R PT++EI+ KVGISP RYH+VMRASK V SLH+
Sbjct: 358  TRVSFGLESVRAEIQKAKLEMIFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHS 417

Query: 448  RHAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 269
            RHA TQEE+INGITD+DGV GD RR+PA            LKPKESLVIRQRYGLDGKGD
Sbjct: 418  RHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGD 477

Query: 268  RTLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            RTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR +IV
Sbjct: 478  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV 519


>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Erythranthe guttatus]
            gi|604299780|gb|EYU19623.1| hypothetical protein
            MIMGU_mgv1a020453mg [Erythranthe guttata]
          Length = 515

 Score =  588 bits (1516), Expect = e-165
 Identities = 320/517 (61%), Positives = 376/517 (72%), Gaps = 2/517 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVS+SASRT +GL  R+ T  S LRRP   AFK DK K   L+SP ES  LP++A 
Sbjct: 1    MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSPTNASVADDSN 1331
            KD                 AVSTD A P T DLDYNEAAAKLE I+K+SPT     D+  
Sbjct: 61   KDNEKRLRKVKKRAERVN-AVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVK 119

Query: 1330 HLVQKRRRMSKRIVEGDEKKEKEMVNVVRNHXXXXXXXXXXXRIALRKKNVDKEEPMGSV 1151
             +  KRR+  KR    DE  EK   NVVR+            RIALR K  D  E     
Sbjct: 120  DVRVKRRQPRKRTEYADEA-EKIADNVVRSRRSKDRRLNLEKRIALRTKKED--ESTAIF 176

Query: 1150 SRRKDG--EASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKALI 977
             RRK G  +    +DRLV  YS ++DLVSLDWKKMKIPPVL S+EH  LFKLMQP+KA++
Sbjct: 177  QRRKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAIL 236

Query: 976  QVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINKYY 797
             VKE +  +LGREP+D +LA A NM  +Q+R+ +E+G AARNKLIKHNLRLVLFV+NKY+
Sbjct: 237  DVKETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYF 296

Query: 796  QEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTRVP 617
            Q+ ++G +FQDLCQAGAKGLI +IDRFE KR LRLSTY LFWIRH I+RS+T SSFT+V 
Sbjct: 297  QDFSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVS 356

Query: 616  FGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARHAV 437
            FGLESVR+EI+KAKLEL+F+L R PT++EIV +VGIS  RYH+VMR SK ++SLHARH+V
Sbjct: 357  FGLESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSV 416

Query: 436  TQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTLG 257
            TQEEFINGITD+DGV GD+R+QPA            LKPKE+LVIRQRYGLDGKGDRTLG
Sbjct: 417  TQEEFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLG 476

Query: 256  EIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHI 146
            EIAGNLNISREMVRKYEVKALMKLKH  RVDYLR ++
Sbjct: 477  EIAGNLNISREMVRKYEVKALMKLKHRARVDYLRRYV 513


>gb|AKC88745.1| sigma factor [Melianthus villosus]
          Length = 513

 Score =  588 bits (1515), Expect = e-165
 Identities = 320/521 (61%), Positives = 381/521 (73%), Gaps = 5/521 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            M VVTVSSS +R+P+GL ++ + H  +L+RP  +AFKTDK  D  LV+PH+ IPLP+   
Sbjct: 1    MEVVTVSSSVARSPLGLSTKPSNHRCTLKRPLIVAFKTDKINDIALVAPHDQIPLPVANA 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSP-TNASVADDS 1334
            K                   V  D +SPCT +LD+NEAAAKLENIYK SP ++ S  ++ 
Sbjct: 61   KKQQKRLGRGTKPSKRTK-VVYADESSPCTLELDFNEAAAKLENIYKLSPPSDTSDVENQ 119

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMV-NVVRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            + L+ + RR  +R   GD+  +K    NVVRN            R+AL +   D +    
Sbjct: 120  DGLMDRGRR--RRRNRGDDTTQKRTTDNVVRNQTKKVKRLSLDKRVALIRHKEDVD---- 173

Query: 1156 SVSRRKDGE---ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMK 986
             VSRR+  +    SYN++ LV  YS +TD+ SLDWKKMKIPPVLSSSEHS LFKLMQPMK
Sbjct: 174  -VSRRRKTDHKNKSYNIEILVREYSSSTDMASLDWKKMKIPPVLSSSEHSWLFKLMQPMK 232

Query: 985  ALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVIN 806
             L+  KE L  DLGREP+D ELADATNM+V+++++ +EVG AARNKLIKHNLRLVLFVIN
Sbjct: 233  GLLNFKENLKTDLGREPTDYELADATNMNVVKLKKEMEVGRAARNKLIKHNLRLVLFVIN 292

Query: 805  KYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFT 626
            KY+Q+ A+G +FQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH I RS+T SSFT
Sbjct: 293  KYFQDFANGSRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAITRSMTLSSFT 352

Query: 625  RVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHAR 446
            RV FGLESVR EIQKAK ELLF L R PTE+EI+ KVG+SP RYH+V+RASK VLSLHA+
Sbjct: 353  RVSFGLESVRAEIQKAKFELLFRLQRLPTEEEIIEKVGVSPERYHEVLRASKPVLSLHAK 412

Query: 445  HAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDR 266
            H +TQEEFIN ITD+DGVG D+RRQPA            LKPKESLVIRQRYGLDGKGDR
Sbjct: 413  HMITQEEFINVITDVDGVGADQRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 472

Query: 265  TLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            TLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR ++V
Sbjct: 473  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRPYLV 513


>ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  588 bits (1515), Expect = e-165
 Identities = 319/522 (61%), Positives = 391/522 (74%), Gaps = 6/522 (1%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVS+SA+RTP+GL ++  +  S  R+P  +AFKTD+S  + LV+P   IPLPI+  
Sbjct: 1    MGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGKIPLPIETR 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTA-DLDYNEAAAKLENIYKRSPTNASVAD-- 1340
            K                  + +TD A+PCT  ++DYNEAAAKLEN+YKRSP   +  D  
Sbjct: 61   KKHQKRIGKARKLAKSVK-STATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVE 119

Query: 1339 DSNHLVQKRRRMSKRIVEGDEKKEKEMVN--VVRNHXXXXXXXXXXXRIALRKKNVDKEE 1166
            D++ L+++ R+  K+  E D +KE++  +  VVR+            R+AL K N D E+
Sbjct: 120  DADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVAL-KWNKD-EK 177

Query: 1165 PMGSVSRRKDGE-ASYNVDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPM 989
             + SV +RKD +  +  ++ LV  YS +TDLVSLDWKKMKIPPVL+SSEH+ LFKLMQPM
Sbjct: 178  VVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 237

Query: 988  KALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVI 809
            K L +V+E L +DLG EP++ ELA+ATNMSV+Q++++ EVG AARNKLIKHNLRLVLFVI
Sbjct: 238  KGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVI 297

Query: 808  NKYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSF 629
            NKY+Q+ A+G KFQDLCQAG +GLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSF
Sbjct: 298  NKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSF 357

Query: 628  TRVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHA 449
            TRV FGLESVR EIQKAKLE++F L R PT++EI+ KVGISP RYH+VMRASK V SLH+
Sbjct: 358  TRVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHS 417

Query: 448  RHAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 269
            RHA TQEE+INGITD+DGV GD RR+PA            LKPKESLVIRQRYGLDGKGD
Sbjct: 418  RHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGD 477

Query: 268  RTLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            RTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR +IV
Sbjct: 478  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV 519


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|641837169|gb|KDO56125.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
            gi|641837170|gb|KDO56126.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
            gi|641837171|gb|KDO56127.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
            gi|641837172|gb|KDO56128.1| hypothetical protein
            CISIN_1g010092mg [Citrus sinensis]
          Length = 513

 Score =  584 bits (1506), Expect = e-164
 Identities = 316/519 (60%), Positives = 384/519 (73%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVT+SSS +R+P+GL +   +H S+ +RP  +AFK DKS +  L SP E IPLPI+ P
Sbjct: 1    MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTADLDYNEAAAKLENIYKRSPT-NASVADDS 1334
            K                 + V +D ASPCT D+DYNEAAAKLENIYK SP    S    +
Sbjct: 59   K-RHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYA 117

Query: 1333 NHLVQKRRRMSKRIVEGDEKKEKEMVN-VVRNHXXXXXXXXXXXRIALRKKNVDKEEPMG 1157
            + +V++ R+  KRI E ++K +      VVRN            RI LRK   +++E + 
Sbjct: 118  DGVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRK---NEDEKVV 174

Query: 1156 SVSRRKDGEASYN-VDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPMKAL 980
            + +R+ D +  +  +++LV  YS +TDLVSLDWKKMKIPPVLSS+EH+ LFKLMQPMK  
Sbjct: 175  TKTRKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVF 234

Query: 979  IQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVINKY 800
            +QVKE L +DLGREP+DVELA+ATNMS  Q+++ +EVG AARNKLIKHNLRLVLFVI KY
Sbjct: 235  VQVKEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKY 294

Query: 799  YQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSFTRV 620
            +Q+ A+G +FQDLCQAG KGLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSFTRV
Sbjct: 295  FQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRV 354

Query: 619  PFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHARHA 440
            PFGLESVR EIQ+AKLELLF+L R PT++EI+  V ISP RY +VM+ASK +LSLH+RH 
Sbjct: 355  PFGLESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHG 414

Query: 439  VTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGDRTL 260
            VTQEEFINGITD+DGV  + +RQPA            LKPKESLVIRQR+GLDGKGDRTL
Sbjct: 415  VTQEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTL 474

Query: 259  GEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            GEIAGNLNISREMVRK+EVK LMKLKHPTRVDYLR H+V
Sbjct: 475  GEIAGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHMV 513


>ref|XP_008376694.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Malus domestica]
          Length = 519

 Score =  583 bits (1504), Expect = e-163
 Identities = 316/522 (60%), Positives = 390/522 (74%), Gaps = 6/522 (1%)
 Frame = -2

Query: 1690 MGVVTVSSSASRTPVGLGSRFATHSSSLRRPSFLAFKTDKSKDSTLVSPHESIPLPIDAP 1511
            MGVVTVS+SA+RTP+GL ++  +  S+ R+P  +AFKTD+S  + LV+P   IPLPI+  
Sbjct: 1    MGVVTVSTSAARTPLGLSAKSTSQRSTFRKPLIVAFKTDESNKTALVAPQGKIPLPIETR 60

Query: 1510 KDXXXXXXXXXXXXXXXXRAVSTDGASPCTA-DLDYNEAAAKLENIYKRSPTNASVAD-- 1340
            K                  + +TD A+PCT  ++DYNEAAAKLEN+YKRSP   +  D  
Sbjct: 61   KKHQKRIGKARKLAKSVK-STATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVE 119

Query: 1339 DSNHLVQKRRRMSKRIVEGDEKKEKEMVN--VVRNHXXXXXXXXXXXRIALRKKNVDKEE 1166
            D++ L+++ R+  K+  E + +KE++  +  VVR+            R++L K N D E+
Sbjct: 120  DADGLMRRGRKRRKKTSESNHEKEEKRTSDIVVRSKTKKAKRLNLDKRVSL-KWNKD-EK 177

Query: 1165 PMGSVSRRKDGEASYN-VDRLVHGYSIATDLVSLDWKKMKIPPVLSSSEHSLLFKLMQPM 989
             + SV +RKD +     ++ LV  YS +TDLVSLDWKKMKIPPVL+SSEH+ LFKLMQPM
Sbjct: 178  VVSSVQKRKDQKNEMEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 237

Query: 988  KALIQVKEALHEDLGREPSDVELADATNMSVLQMRRNIEVGHAARNKLIKHNLRLVLFVI 809
            K L + +E L +DLG EP++ ELA+ATNMSV+Q++++ EVG AARNKLIKHNLRLVLFVI
Sbjct: 238  KGLHEAREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVI 297

Query: 808  NKYYQEIASGQKFQDLCQAGAKGLIISIDRFELKRGLRLSTYALFWIRHGIMRSLTTSSF 629
            NKY+Q+ A+G KFQDLCQAG +GLI +IDRFE KR  RLSTY LFWIRH I+RS+T SSF
Sbjct: 298  NKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSF 357

Query: 628  TRVPFGLESVRLEIQKAKLELLFDLGREPTEDEIVSKVGISPARYHDVMRASKQVLSLHA 449
            TRV FGLESVR EIQKAKLE++F L R PT++EI+ KVGISP RYH+VMRASK V SLH+
Sbjct: 358  TRVSFGLESVRAEIQKAKLEMIFSLKRIPTDEEIIEKVGISPERYHEVMRASKPVSSLHS 417

Query: 448  RHAVTQEEFINGITDIDGVGGDKRRQPAXXXXXXXXXXXXLKPKESLVIRQRYGLDGKGD 269
            RHA TQEE+INGITD+DGV GD RR+PA            LKPKESLVIRQRYGLDGKGD
Sbjct: 418  RHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGD 477

Query: 268  RTLGEIAGNLNISREMVRKYEVKALMKLKHPTRVDYLRHHIV 143
            RTLGEIAGNLNISREMVRK+EVKALMKLKHP RVDYLR +IV
Sbjct: 478  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV 519