BLASTX nr result

ID: Cimicifuga21_contig00041473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041473
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267...   105   5e-21
ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002523387.1| conserved hypothetical protein [Ricinus comm...    91   7e-17
emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|72694...    79   3e-13
ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp....    79   5e-13

>ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267326 [Vitis vinifera]
          Length = 557

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/67 (76%), Positives = 56/67 (83%)
 Frame = -2

Query: 281 AKLNEYEEIRRRMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFKNFAPVIGGCQG 102
           AKL EY E++RRMSCV NSD+LRSARNALNQYPRFSLDGKDAMYRSSF+N AP       
Sbjct: 122 AKLQEYGEMQRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRNLAP------- 174

Query: 101 GRKSVCC 81
           GRKS+CC
Sbjct: 175 GRKSICC 181


>ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|222844868|gb|EEE82415.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/96 (55%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
 Frame = -2

Query: 281 AKLNEYEEI---RRRMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFKNFAPVIGG 111
           AKLN Y ++     RMSCV NSD+LRSARNAL+QYPRFSLDGKDAMYRSSF+N   V   
Sbjct: 72  AKLNNYVDVGLRAGRMSCVNNSDILRSARNALSQYPRFSLDGKDAMYRSSFRNLDSV-SK 130

Query: 110 CQGGRKSVCCXXXXXXXXXXXGFDYDIGRNLNLPQT 3
              GRKSVCC                  R L+LP T
Sbjct: 131 AAAGRKSVCCDHGLRERMNRNNLGAKFERKLSLPPT 166


>ref|XP_002523387.1| conserved hypothetical protein [Ricinus communis]
           gi|223537337|gb|EEF38966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = -2

Query: 281 AKLNEYEEIR-RRMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFKNFAPVIGGCQ 105
           +KLNE   +R RRMSCV NSD+LRSARNALNQYPRFSLDGKDAMYRSSF+N   +     
Sbjct: 82  SKLNELVAMRGRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRN---LDHHQV 138

Query: 104 GGRKSVCC 81
            GRKSVCC
Sbjct: 139 AGRKSVCC 146


>emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|7269494|emb|CAB79497.1|
           putative protein [Arabidopsis thaliana]
          Length = 619

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/57 (70%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = -2

Query: 248 RMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFKNFAPVIGG--CQGGRKSVC 84
           RMSCV +SD+LRSARNALNQYPRFSLDGKDAMYRSSF+           QGGR+S C
Sbjct: 446 RMSCVNSSDILRSARNALNQYPRFSLDGKDAMYRSSFRRHLGTSADMTIQGGRRSHC 502


>ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313401|gb|EFH43824.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 647

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/57 (70%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = -2

Query: 248 RMSCVTNSDVLRSARNALNQYPRFSLDGKDAMYRSSFKNFAPVIGG--CQGGRKSVC 84
           RMSCV +SD+LRSARNALNQYPRFSLDGKDAMYRSSF+           QGGR+S C
Sbjct: 474 RMSCVNSSDILRSARNALNQYPRFSLDGKDAMYRSSFRRQLGTSADMTIQGGRRSHC 530


Top