BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041403
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33923.3| unnamed protein product [Vitis vinifera]              191   4e-47
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   191   4e-47
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group] g...   145   3e-33

>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/106 (84%), Positives = 96/106 (90%)
 Frame = +3

Query: 3   LEGW*YFDLMQRVYKIEPKVEHYGCMVDLLGRAGLMKDSEEIIRKMPMEAGPALWGALLS 182
           LEGW YFDLM+R YKIEPKVEHYGCMVDLLGRAGLMKD EE+IRKMPME G ALWGALLS
Sbjct: 322 LEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLS 381

Query: 183 ACKTHSNFELGEIVGKRLIELDPGDVGPYVLLSNIYAMEGKWDDVE 320
           AC+THSN EL EIV KRLIEL+P D+GPY+LLSNIYA EGKWDDVE
Sbjct: 382 ACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVE 427


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/106 (84%), Positives = 96/106 (90%)
 Frame = +3

Query: 3   LEGW*YFDLMQRVYKIEPKVEHYGCMVDLLGRAGLMKDSEEIIRKMPMEAGPALWGALLS 182
           LEGW YFDLM+R YKIEPKVEHYGCMVDLLGRAGLMKD EE+IRKMPME G ALWGALLS
Sbjct: 471 LEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLS 530

Query: 183 ACKTHSNFELGEIVGKRLIELDPGDVGPYVLLSNIYAMEGKWDDVE 320
           AC+THSN EL EIV KRLIEL+P D+GPY+LLSNIYA EGKWDDVE
Sbjct: 531 ACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVE 576


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score =  172 bits (435), Expect = 3e-41
 Identities = 77/106 (72%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   LEGW*YFDLMQRVYKIEPKVEHYGCMVDLLGRAGLMKDSEEIIRKMPMEAGPALWGALLS 182
           +EGW YFDLMQRVYKIEPKVEHYGCMVDLL RAGL+++SEE+IR +P++AG A+WGALLS
Sbjct: 422 MEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLS 481

Query: 183 ACKTHSNFELGEIVGKRLIELDPGDVGPYVLLSNIYAMEGKWDDVE 320
            C  H + ELGEIV KR IEL+P D+GPY+LLSN+YA +G+WDDVE
Sbjct: 482 GCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVE 527


>ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 604

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/107 (62%), Positives = 85/107 (79%)
 Frame = +3

Query: 3   LEGW*YFDLMQRVYKIEPKVEHYGCMVDLLGRAGLMKDSEEIIRKMPMEAGPALWGALLS 182
           LEGW  FD M R Y  EPK EH+GCM+DLLGRAGL+KDSE +I+ +  +A PALWG ++S
Sbjct: 435 LEGWWCFDRMVRFYGFEPKAEHFGCMMDLLGRAGLLKDSENLIQNLQGKASPALWGIMMS 494

Query: 183 ACKTHSNFELGEIVGKRLIELDPGDVGPYVLLSNIYAMEGKWDDVEK 323
           A +T +N++LGE VGK+LIE+ P + GPY+LLSNIYA EG+W DVEK
Sbjct: 495 ASQTQNNYKLGEFVGKKLIEMKPAEFGPYLLLSNIYASEGRWGDVEK 541


>ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
           gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|51091564|dbj|BAD36301.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113631371|dbj|BAF25052.1|
           Os09g0407800 [Oryza sativa Japonica Group]
           gi|215740507|dbj|BAG97163.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 612

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/107 (62%), Positives = 83/107 (77%)
 Frame = +3

Query: 3   LEGW*YFDLMQRVYKIEPKVEHYGCMVDLLGRAGLMKDSEEIIRKMPMEAGPALWGALLS 182
           LEGW  FD M R Y IEPK EH+GCM+DLLGRAGL++ SE +I  +  +   ALWG L+S
Sbjct: 437 LEGWWCFDRMVRFYSIEPKSEHFGCMMDLLGRAGLLEQSENLIENLQGKVSEALWGILMS 496

Query: 183 ACKTHSNFELGEIVGKRLIELDPGDVGPYVLLSNIYAMEGKWDDVEK 323
           A +T +N +LGE VGK+LIE+ P +VGPY+LLSNIYA EG+WDDVEK
Sbjct: 497 ASQTQNNIKLGEFVGKKLIEMRPTEVGPYILLSNIYAAEGRWDDVEK 543