BLASTX nr result

ID: Cimicifuga21_contig00041370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041370
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298634.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211...   117   1e-24
ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002304676.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002297848.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_002298634.1| predicted protein [Populus trichocarpa]
           gi|224055751|ref|XP_002298635.1| predicted protein
           [Populus trichocarpa] gi|222845892|gb|EEE83439.1|
           predicted protein [Populus trichocarpa]
           gi|222845893|gb|EEE83440.1| predicted protein [Populus
           trichocarpa]
          Length = 70

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/69 (78%), Positives = 61/69 (88%)
 Frame = +3

Query: 63  SDWGPVFVATVLFILLTPGLLVQMPGRNRFVEFGNFQTSGASIFLHTIIYFVLICIFLLA 242
           SDWGPVFVA VLFILLTPGLL+Q+PGR R VEFGNFQTSG SI +H+I+YF LICIFLLA
Sbjct: 2   SDWGPVFVAVVLFILLTPGLLIQIPGRQRLVEFGNFQTSGVSILVHSILYFALICIFLLA 61

Query: 243 IKLHVYVDS 269
           + +HVYV S
Sbjct: 62  VGVHVYVGS 70


>ref|XP_004138621.1| PREDICTED: uncharacterized protein LOC101211888 [Cucumis sativus]
           gi|449531380|ref|XP_004172664.1| PREDICTED:
           uncharacterized LOC101211888 [Cucumis sativus]
          Length = 142

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/66 (77%), Positives = 62/66 (93%)
 Frame = +3

Query: 63  SDWGPVFVATVLFILLTPGLLVQMPGRNRFVEFGNFQTSGASIFLHTIIYFVLICIFLLA 242
           +DWGPVFVA +LF+LLTPGLLVQMPG++RFVEFGNFQTSG SI +H+I+YF LICIFLLA
Sbjct: 2   ADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLA 61

Query: 243 IKLHVY 260
           +++HVY
Sbjct: 62  VRVHVY 67



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 36/69 (52%), Positives = 52/69 (75%)
 Frame = +3

Query: 54  EMSSDWGPVFVATVLFILLTPGLLVQMPGRNRFVEFGNFQTSGASIFLHTIIYFVLICIF 233
           E  SDW PV +  VLF+LL+PGLL Q PG NR  EFG+ +T+G ++ +HT+I+FVL  +F
Sbjct: 72  ETMSDWAPVVIGVVLFVLLSPGLLFQFPGNNRQFEFGSMKTNGKAVAIHTLIFFVLYAVF 131

Query: 234 LLAIKLHVY 260
           +LA+ +H+Y
Sbjct: 132 ILALHIHIY 140


>ref|XP_002328877.1| predicted protein [Populus trichocarpa] gi|222839307|gb|EEE77644.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/69 (75%), Positives = 62/69 (89%)
 Frame = +3

Query: 63  SDWGPVFVATVLFILLTPGLLVQMPGRNRFVEFGNFQTSGASIFLHTIIYFVLICIFLLA 242
           SDWGPVFVA VLFILLTPGLL+QMPG +RF+EFGNF+TSG SI +H+I+YF LICIFLLA
Sbjct: 2   SDWGPVFVAVVLFILLTPGLLIQMPGHHRFIEFGNFKTSGVSILVHSILYFALICIFLLA 61

Query: 243 IKLHVYVDS 269
           + +H+YV S
Sbjct: 62  VGVHMYVGS 70


>ref|XP_002304676.1| predicted protein [Populus trichocarpa] gi|222842108|gb|EEE79655.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  115 bits (287), Expect = 5e-24
 Identities = 50/67 (74%), Positives = 62/67 (92%)
 Frame = +3

Query: 63  SDWGPVFVATVLFILLTPGLLVQMPGRNRFVEFGNFQTSGASIFLHTIIYFVLICIFLLA 242
           SDWGPVF+A VLFILLTPGLL Q+PGR+R +EFGNFQTSGASI +HT++YF LIC+FLLA
Sbjct: 2   SDWGPVFMAVVLFILLTPGLLFQVPGRHRSIEFGNFQTSGASIMVHTLLYFALICVFLLA 61

Query: 243 IKLHVYV 263
           +K+H+Y+
Sbjct: 62  VKVHLYL 68


>ref|XP_002297848.1| predicted protein [Populus trichocarpa] gi|222845106|gb|EEE82653.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/67 (74%), Positives = 62/67 (92%)
 Frame = +3

Query: 63  SDWGPVFVATVLFILLTPGLLVQMPGRNRFVEFGNFQTSGASIFLHTIIYFVLICIFLLA 242
           SDWGPVF+A VLFILLTPGLL Q+PGR+R+VEFGNFQTSGASI +HT++YF LIC+ LLA
Sbjct: 2   SDWGPVFMAVVLFILLTPGLLFQVPGRHRYVEFGNFQTSGASIMVHTLLYFALICVSLLA 61

Query: 243 IKLHVYV 263
           +K+H+Y+
Sbjct: 62  VKVHLYL 68


Top