BLASTX nr result

ID: Cimicifuga21_contig00041349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041349
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine...   114   6e-24
emb|CBI30512.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002336269.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003520371.1| PREDICTED: probable LRR receptor-like serine...    96   4e-18
ref|XP_002323215.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1100

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = +1

Query: 4   SLNISQ-SLPLPRLSNLTDQNALLHFKSYITSDPNGIFHSWNTDTSFCYWEGVLCNATKQ 180
           +LN SQ SL +P  +N TDQ+ LL FK+ +T DPNG+  +W  +TSFC W GVLCN  K 
Sbjct: 112 TLNHSQASLRIPHFNNSTDQDVLLSFKAQVTKDPNGVLDTWKPNTSFCNWHGVLCNPMKN 171

Query: 181 RVTGLALANLSLAGTISPHITNLSFLQFLDLQNN 282
           RVTGL L NL+LAGTI+ +I NLSFL+ LDLQ N
Sbjct: 172 RVTGLTLRNLTLAGTITSYIANLSFLRRLDLQEN 205


>emb|CBI30512.3| unnamed protein product [Vitis vinifera]
          Length = 661

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/94 (59%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = +1

Query: 4   SLNISQ-SLPLPRLSNLTDQNALLHFKSYITSDPNGIFHSWNTDTSFCYWEGVLCNATKQ 180
           +LN SQ SL +P  +N TDQ+ LL FK+ +T DPNG+  +W  +TSFC W GVLCN  K 
Sbjct: 15  TLNHSQASLRIPHFNNSTDQDVLLSFKAQVTKDPNGVLDTWKPNTSFCNWHGVLCNPMKN 74

Query: 181 RVTGLALANLSLAGTISPHITNLSFLQFLDLQNN 282
           RVTGL L NL+LAGTI+ +I NLSFL+ LDLQ N
Sbjct: 75  RVTGLTLRNLTLAGTITSYIANLSFLRRLDLQEN 108


>ref|XP_002336269.1| predicted protein [Populus trichocarpa] gi|222833133|gb|EEE71610.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/79 (56%), Positives = 54/79 (68%)
 Frame = +1

Query: 46  NLTDQNALLHFKSYITSDPNGIFHSWNTDTSFCYWEGVLCNATKQRVTGLALANLSLAGT 225
           N TDQ AL+ FK++IT+DP G+  SWN    FC W GVLC    QRV  L L +  LAG 
Sbjct: 40  NETDQLALVEFKTHITNDPLGVLRSWNNSIHFCQWHGVLCGRRHQRVIALDLGSYKLAGY 99

Query: 226 ISPHITNLSFLQFLDLQNN 282
           ISPH+ NLSFL+ LDL+NN
Sbjct: 100 ISPHVGNLSFLRLLDLRNN 118


>ref|XP_003520371.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Glycine max]
          Length = 986

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/79 (56%), Positives = 54/79 (68%)
 Frame = +1

Query: 46  NLTDQNALLHFKSYITSDPNGIFHSWNTDTSFCYWEGVLCNATKQRVTGLALANLSLAGT 225
           N TDQ ALL F+  I++DP GIF SWN    FC W G++CN T QRVT L L    L GT
Sbjct: 9   NETDQLALLKFRESISTDPYGIFLSWNNSAHFCNWHGIICNPTLQRVTELNLLGYKLKGT 68

Query: 226 ISPHITNLSFLQFLDLQNN 282
           ISPH+ NLS+++ LDL NN
Sbjct: 69  ISPHVGNLSYMRSLDLGNN 87


>ref|XP_002323215.1| predicted protein [Populus trichocarpa] gi|222867845|gb|EEF04976.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = +1

Query: 43  SNLTDQNALLHFKSYITSDP-NGIFHSWNTDTSFCYWEGVLCNATKQRVTGLALANLSLA 219
           SN TDQ+ALL FK +IT DP N + HSW++ TSFC W GV C+  +QRVT L L+++ L 
Sbjct: 27  SNFTDQSALLAFKDHITFDPQNMLTHSWSSKTSFCNWMGVSCSLRRQRVTALDLSSMGLL 86

Query: 220 GTISPHITNLSFLQFLDLQNN 282
           GTI P + NLSFLQ+L L NN
Sbjct: 87  GTIPPQLGNLSFLQYLILYNN 107


Top