BLASTX nr result

ID: Cimicifuga21_contig00041335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041335
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283074.2| PREDICTED: uncharacterized protein LOC100264...    88   8e-16
emb|CBI33342.3| unnamed protein product [Vitis vinifera]               88   8e-16
emb|CAN72207.1| hypothetical protein VITISV_020905 [Vitis vinifera]    88   8e-16
ref|XP_002518155.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_002304697.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14

>ref|XP_002283074.2| PREDICTED: uncharacterized protein LOC100264819 [Vitis vinifera]
          Length = 849

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/95 (45%), Positives = 68/95 (71%)
 Frame = +1

Query: 19  LLIEGFPLNLLSNKVQKLATQRIITGYHSFMEANSKKLRVDNFSRSCSSSVLGGPVYALS 198
           LL+EGFPLNLLS+ ++ +AT+RI+T Y  F+++       D   ++CSS V G PV+ALS
Sbjct: 492 LLMEGFPLNLLSDSMKSIATRRIMTDYFGFIDSFD-----DKTLQACSSGVFGLPVFALS 546

Query: 199 SALRCLQISSSDIDAKTLKFTLSLIHGYRGATERL 303
           +AL+ +++ +SDID KTL+F +++I  YR + + L
Sbjct: 547 AALQSIEVKTSDIDTKTLRFLVAIIQKYRSSMDNL 581


>emb|CBI33342.3| unnamed protein product [Vitis vinifera]
          Length = 1023

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/95 (45%), Positives = 68/95 (71%)
 Frame = +1

Query: 19  LLIEGFPLNLLSNKVQKLATQRIITGYHSFMEANSKKLRVDNFSRSCSSSVLGGPVYALS 198
           LL+EGFPLNLLS+ ++ +AT+RI+T Y  F+++       D   ++CSS V G PV+ALS
Sbjct: 660 LLMEGFPLNLLSDSMKSIATRRIMTDYFGFIDSFD-----DKTLQACSSGVFGLPVFALS 714

Query: 199 SALRCLQISSSDIDAKTLKFTLSLIHGYRGATERL 303
           +AL+ +++ +SDID KTL+F +++I  YR + + L
Sbjct: 715 AALQSIEVKTSDIDTKTLRFLVAIIQKYRSSMDNL 749


>emb|CAN72207.1| hypothetical protein VITISV_020905 [Vitis vinifera]
          Length = 901

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/95 (45%), Positives = 68/95 (71%)
 Frame = +1

Query: 19  LLIEGFPLNLLSNKVQKLATQRIITGYHSFMEANSKKLRVDNFSRSCSSSVLGGPVYALS 198
           LL+EGFPLNLLS+ ++ +AT+RI+T Y  F+++       D   ++CSS V G PV+ALS
Sbjct: 507 LLMEGFPLNLLSDSMKSIATRRIMTDYFGFIDSFD-----DKTLQACSSGVFGLPVFALS 561

Query: 199 SALRCLQISSSDIDAKTLKFTLSLIHGYRGATERL 303
           +AL+ +++ +SDID KTL+F +++I  YR + + L
Sbjct: 562 AALQSIEVKTSDIDTKTLRFLVAIIQKYRSSMDNL 596


>ref|XP_002518155.1| conserved hypothetical protein [Ricinus communis]
           gi|223542751|gb|EEF44288.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 898

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/95 (44%), Positives = 63/95 (66%)
 Frame = +1

Query: 19  LLIEGFPLNLLSNKVQKLATQRIITGYHSFMEANSKKLRVDNFSRSCSSSVLGGPVYALS 198
           LL+EGFPLN LS+ ++ +A Q+I+T Y SF   +S KL     S +CSS V G PV+ LS
Sbjct: 543 LLLEGFPLNSLSDNLRSIAKQKIVTDYFSFTATSSHKL-----STTCSSGVFGFPVFTLS 597

Query: 199 SALRCLQISSSDIDAKTLKFTLSLIHGYRGATERL 303
           ++L+  Q+S SD+D K+L F ++ I  ++ A  +L
Sbjct: 598 ASLQSQQVSISDVDMKSLNFLVTTIRNFKNAVHKL 632


>ref|XP_002304697.1| predicted protein [Populus trichocarpa] gi|222842129|gb|EEE79676.1|
           predicted protein [Populus trichocarpa]
          Length = 1000

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/101 (42%), Positives = 65/101 (64%)
 Frame = +1

Query: 1   SPLSSTLLIEGFPLNLLSNKVQKLATQRIITGYHSFMEANSKKLRVDNFSRSCSSSVLGG 180
           S L + LL+EGFPLN LS+ ++  A Q+IIT Y  F+ +   K+       +CSS   G 
Sbjct: 639 SVLYAALLLEGFPLNSLSDNIRSGAKQKIITDYFGFIGSFDDKVLT-----TCSSGAFGI 693

Query: 181 PVYALSSALRCLQISSSDIDAKTLKFTLSLIHGYRGATERL 303
           PV+ALS++L+  Q+S SD+D KTLKF +++I  +R   E++
Sbjct: 694 PVHALSASLQAQQVSISDVDVKTLKFLVAIIRNFRNPVEKI 734


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