BLASTX nr result

ID: Cimicifuga21_contig00041217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041217
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589671.1| hypothetical protein MTR_1g034810 [Medicago ...   181   7e-44
ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   179   3e-43
ref|XP_003535750.1| PREDICTED: uncharacterized protein At4g15970...   177   6e-43
ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970...   176   1e-42

>ref|XP_003589671.1| hypothetical protein MTR_1g034810 [Medicago truncatula]
           gi|355478719|gb|AES59922.1| hypothetical protein
           MTR_1g034810 [Medicago truncatula]
          Length = 306

 Score =  181 bits (458), Expect = 7e-44
 Identities = 77/101 (76%), Positives = 94/101 (93%)
 Frame = +2

Query: 2   KFWYSSRETHPGYHDQDVLNMIKHDPFITEIGLTMRFLNTAYFGGLCEPSKNLNQVCTMH 181
           KFWYSS++T+PGYHDQDVLN IK DP+I +IGL M+FL+TAYFGGLCEPS++LNQVCTMH
Sbjct: 181 KFWYSSQDTYPGYHDQDVLNFIKVDPYIFDIGLKMKFLDTAYFGGLCEPSRDLNQVCTMH 240

Query: 182 ANCCYGLDNKLHDLRIMLEDWRRFISLPPSVKRSSLKSWRV 304
           ANCCYG+DNKLHDL+IML+DWR +++LPPS+KR S+ SWRV
Sbjct: 241 ANCCYGMDNKLHDLKIMLQDWRYYLTLPPSLKRLSIISWRV 281


>ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  180 bits (457), Expect = 9e-44
 Identities = 79/101 (78%), Positives = 91/101 (90%)
 Frame = +2

Query: 2   KFWYSSRETHPGYHDQDVLNMIKHDPFITEIGLTMRFLNTAYFGGLCEPSKNLNQVCTMH 181
           KFWYSSRET+PGYHDQDVLN IK DPFI ++GL MRFL+TA+FGGLCEPSK+LN VCTMH
Sbjct: 279 KFWYSSRETYPGYHDQDVLNFIKFDPFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMH 338

Query: 182 ANCCYGLDNKLHDLRIMLEDWRRFISLPPSVKRSSLKSWRV 304
           ANCCYGLD+KLHDLRIML+DW+ F+SLPP++KRSS   W V
Sbjct: 339 ANCCYGLDSKLHDLRIMLQDWKTFLSLPPALKRSSSMLWTV 379


>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  179 bits (453), Expect = 3e-43
 Identities = 79/101 (78%), Positives = 93/101 (92%)
 Frame = +2

Query: 2   KFWYSSRETHPGYHDQDVLNMIKHDPFITEIGLTMRFLNTAYFGGLCEPSKNLNQVCTMH 181
           KFWYSSRET+PG HDQDVLN IK+  FI ++GL MRFL+TA+FGGLCEPSK+LN VCTMH
Sbjct: 271 KFWYSSRETYPGIHDQDVLNKIKNASFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMH 330

Query: 182 ANCCYGLDNKLHDLRIMLEDWRRFISLPPSVKRSSLKSWRV 304
           ANCCYGL++KLHDLRIML+DW+RF+SLPPS+KRSS+ SWRV
Sbjct: 331 ANCCYGLESKLHDLRIMLQDWKRFLSLPPSLKRSSVVSWRV 371


>ref|XP_003535750.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]
          Length = 364

 Score =  177 bits (450), Expect = 6e-43
 Identities = 78/101 (77%), Positives = 91/101 (90%)
 Frame = +2

Query: 2   KFWYSSRETHPGYHDQDVLNMIKHDPFITEIGLTMRFLNTAYFGGLCEPSKNLNQVCTMH 181
           KFWYSSRET+PGYHDQDVLN IK  PFIT+IGL MRFL+T  FGGLCEPS++LNQVCTMH
Sbjct: 243 KFWYSSRETYPGYHDQDVLNFIKVHPFITDIGLKMRFLDTTNFGGLCEPSRDLNQVCTMH 302

Query: 182 ANCCYGLDNKLHDLRIMLEDWRRFISLPPSVKRSSLKSWRV 304
           ANCC G+D+KLHDLRIML+DW+ ++SLPPS+KR S+ SWRV
Sbjct: 303 ANCCLGMDSKLHDLRIMLQDWKHYLSLPPSLKRLSVVSWRV 343


>ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]
          Length = 436

 Score =  176 bits (447), Expect = 1e-42
 Identities = 76/101 (75%), Positives = 93/101 (92%)
 Frame = +2

Query: 2   KFWYSSRETHPGYHDQDVLNMIKHDPFITEIGLTMRFLNTAYFGGLCEPSKNLNQVCTMH 181
           KFWYSSRET+PGYHDQDVLN IK DPFIT++GL M+FL+TA FGGLCEPS++LN+VCTMH
Sbjct: 285 KFWYSSRETYPGYHDQDVLNFIKVDPFITDLGLRMKFLDTANFGGLCEPSRDLNKVCTMH 344

Query: 182 ANCCYGLDNKLHDLRIMLEDWRRFISLPPSVKRSSLKSWRV 304
           ANCCYG+D+KLHDLRIML+DW+ +++L PS+KR S+ SWRV
Sbjct: 345 ANCCYGMDSKLHDLRIMLQDWKYYLTLSPSLKRLSIISWRV 385


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