BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041103
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]    92   6e-17
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CBI28421.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,...    88   6e-16
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15

>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           MAE+GL  NV+TY TLI+GL RNG    AFK+  +M K+ C PNL+ YSSLIYGLCQEGK
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675

Query: 24  AEDAEQLI 1
           A++AE L+
Sbjct: 676 ADEAEILL 683



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/72 (45%), Positives = 45/72 (62%)
 Frame = -3

Query: 216 ILLTMAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLC 37
           IL  + +  LS +V TY +LI G  RN  + LAF V D MVK+ C PN   YS+LI GLC
Sbjct: 262 ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC 321

Query: 36  QEGKAEDAEQLI 1
            EG+ ++A  ++
Sbjct: 322 NEGRVDEALDML 333



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/67 (37%), Positives = 46/67 (68%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M E GL+ N V+Y TLI+G S++G + +A  +++ M +  C+PN+  Y+++I GL +E +
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605

Query: 24  AEDAEQL 4
             +AE++
Sbjct: 606 FSEAEKI 612


>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M E+GL  NV+TY TLI+GL RNG    AFK+  +M K+ C PNL+ YSSLIYGLCQEGK
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633

Query: 24  AEDAEQL 4
           A++AE++
Sbjct: 634 ADEAERM 640



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/72 (45%), Positives = 45/72 (62%)
 Frame = -3

Query: 216 ILLTMAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLC 37
           IL  + +  LS +V TY +LI G  RN  + LAF V D MVK+ C PN   YS+LI GLC
Sbjct: 220 ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC 279

Query: 36  QEGKAEDAEQLI 1
            EG+ ++A  ++
Sbjct: 280 NEGRVDEALDML 291



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = -3

Query: 216 ILLTMAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLC 37
           +L  M E G + NV +Y  +INGLS+    S A K+ D+MV++   PN+  Y++LI GLC
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594

Query: 36  QEGKAEDA 13
           + G+ + A
Sbjct: 595 RNGRTQFA 602



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/67 (35%), Positives = 44/67 (65%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M E GL+ N V+Y  LI+G S++G + +A  ++  M +  C+PN+  Y+++I GL +E +
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 24  AEDAEQL 4
             +AE++
Sbjct: 564 FSEAEKI 570


>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/68 (61%), Positives = 52/68 (76%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M E+GL  NV+TY TLI+GL RNG    AFK+  +M K+ C PNL+ YSSLIYGLCQEGK
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633

Query: 24  AEDAEQLI 1
           A++AE L+
Sbjct: 634 ADEAEILL 641



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/72 (45%), Positives = 45/72 (62%)
 Frame = -3

Query: 216 ILLTMAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLC 37
           IL  + +  LS +V TY +LI G  RN  + LAF V D MVK+ C PN   YS+LI GLC
Sbjct: 220 ILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLC 279

Query: 36  QEGKAEDAEQLI 1
            EG+ ++A  ++
Sbjct: 280 NEGRVDEALDML 291



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = -3

Query: 216 ILLTMAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLC 37
           +L  M E G + NV +Y  +INGLS+    S A K+ D+MV++   PN+  Y++LI GLC
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594

Query: 36  QEGKAEDA 13
           + G+ + A
Sbjct: 595 RNGRTQFA 602



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/67 (35%), Positives = 44/67 (65%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M E GL+ N V+Y  LI+G S++G + +A  ++  M +  C+PN+  Y+++I GL +E +
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 24  AEDAEQL 4
             +AE++
Sbjct: 564 FSEAEKI 570


>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 821

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/67 (59%), Positives = 50/67 (74%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M E+GL  N +TY +LINGL +N   +LAFK+  EM KK+C PN H Y+SLIYGLCQEGK
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632

Query: 24  AEDAEQL 4
            + AE+L
Sbjct: 633 VDAAERL 639



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/63 (44%), Positives = 38/63 (60%)
 Frame = -3

Query: 189 LSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGKAEDAE 10
           L  +  TY +LI G  RN  +  AF+V D MVK  C+PN   YS+LI GLC EG+  +A 
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287

Query: 9   QLI 1
            ++
Sbjct: 288 DML 290



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 40/68 (58%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M + G + N VTY+TLINGL   G I  A  +++EM +K   P ++ Y+  I  LC  G+
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317

Query: 24  AEDAEQLI 1
            +DA  L+
Sbjct: 318 VDDAINLV 325


>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = -3

Query: 204 MAERGLSMNVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGK 25
           M ++GL  NV+TY + I+GL RNG   LAFK+  EM K++  PNL+ YSSLIYGLCQEG+
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 24  AEDAE 10
           AEDAE
Sbjct: 638 AEDAE 642



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = -3

Query: 180 NVVTYATLINGLSRNGGISLAFKVIDEMVKKDCHPNLHVYSSLIYGLCQEGKAEDAEQLI 1
           N  TY +LI G  RN  + LAF + D MVK  C PN   YS+LI GLC EG+ E+A  ++
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295