BLASTX nr result
ID: Cimicifuga21_contig00041062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00041062
(322 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 140 1e-31
ref|XP_002311156.1| predicted protein [Populus trichocarpa] gi|2... 129 2e-28
ref|XP_002528456.1| pentatricopeptide repeat-containing protein,... 127 1e-27
ref|XP_002881665.1| pentatricopeptide repeat-containing protein ... 109 3e-22
>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 140 bits (353), Expect = 1e-31
Identities = 67/104 (64%), Positives = 85/104 (81%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
EKAKQ+F G+ +D+VAWSAIIAA QTG EALSLF+EMQN + NR+T+MS+LPAC
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQA 11
A+LS + LGKS+H + +K+D+ D+STGTALVSMYAKCGFF+ A
Sbjct: 441 ADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484
Score = 79.7 bits (195), Expect = 2e-13
Identities = 36/99 (36%), Positives = 65/99 (65%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
++A+++F+ +P++D+VAW+A+IA SQ+ + EA+ FR MQ + ++++++ P
Sbjct: 181 KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCG 26
+LS I L +S+H YV + D VS G L+ +Y+KCG
Sbjct: 241 CKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCG 277
Score = 73.6 bits (179), Expect = 2e-11
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -1
Query: 286 KDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAELSAINLGKSV 107
KD V W+ IIAA+ Q G++ EA+S F +M+ N N +T +SVLPA A L+A G +
Sbjct: 596 KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655
Query: 106 HWYVIKSDIGLDVSTGTALVSMYAKCG 26
H +I+ + G +L+ MYAKCG
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCG 682
Score = 71.2 bits (173), Expect = 8e-11
Identities = 36/105 (34%), Positives = 61/105 (58%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A+++F+ + +D V+W ++A ++ G VE L LF +M+ GN R N+++ +S A AE
Sbjct: 282 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
+ GK +H ++ I D+ T L+ MYAKCG +A+ L
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/101 (30%), Positives = 56/101 (55%)
Frame = -1
Query: 304 FEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAELSAI 125
F + +DIV W+++I ++Q G+ A+ +F +++ + T++ V+PACA L+ +
Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547
Query: 124 NLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
+ G +H ++K D AL+ MYAKCG A+ L
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 140 bits (353), Expect = 1e-31
Identities = 67/104 (64%), Positives = 85/104 (81%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
EKAKQ+F G+ +D+VAWSAIIAA QTG EALSLF+EMQN + NR+T+MS+LPAC
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQA 11
A+LS + LGKS+H + +K+D+ D+STGTALVSMYAKCGFF+ A
Sbjct: 441 ADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484
Score = 79.7 bits (195), Expect = 2e-13
Identities = 36/99 (36%), Positives = 65/99 (65%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
++A+++F+ +P++D+VAW+A+IA SQ+ + EA+ FR MQ + ++++++ P
Sbjct: 181 KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCG 26
+LS I L +S+H YV + D VS G L+ +Y+KCG
Sbjct: 241 CKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCG 277
Score = 73.6 bits (179), Expect = 2e-11
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -1
Query: 286 KDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAELSAINLGKSV 107
KD V W+ IIAA+ Q G++ EA+S F +M+ N N +T +SVLPA A L+A G +
Sbjct: 596 KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655
Query: 106 HWYVIKSDIGLDVSTGTALVSMYAKCG 26
H +I+ + G +L+ MYAKCG
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCG 682
Score = 71.2 bits (173), Expect = 8e-11
Identities = 36/105 (34%), Positives = 61/105 (58%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A+++F+ + +D V+W ++A ++ G VE L LF +M+ GN R N+++ +S A AE
Sbjct: 282 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
+ GK +H ++ I D+ T L+ MYAKCG +A+ L
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/101 (30%), Positives = 56/101 (55%)
Frame = -1
Query: 304 FEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAELSAI 125
F + +DIV W+++I ++Q G+ A+ +F +++ + T++ V+PACA L+ +
Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547
Query: 124 NLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
+ G +H ++K D AL+ MYAKCG A+ L
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
>ref|XP_002311156.1| predicted protein [Populus trichocarpa] gi|222850976|gb|EEE88523.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 129 bits (325), Expect = 2e-28
Identities = 63/107 (58%), Positives = 84/107 (78%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
+ AKQ+F+ I +D+VAWSAIIAAF Q+G EALSLFR MQN +AN++ ++S LPAC
Sbjct: 40 DTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPAC 99
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
AE+S++ LGKS+H +K+++ LD+S GTALVSMYAKCGFF+ A L
Sbjct: 100 AEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTL 146
Score = 80.5 bits (197), Expect = 1e-13
Identities = 37/94 (39%), Positives = 60/94 (63%)
Frame = -1
Query: 289 RKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAELSAINLGKS 110
RKD V+W+ +IA + +G++++A S F +M+ N + N +TI++VLPA A LSA+ G +
Sbjct: 254 RKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMT 313
Query: 109 VHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQ 8
+H YVI+ G L+ MYAKCG+ ++
Sbjct: 314 LHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSE 347
Score = 74.7 bits (182), Expect = 7e-12
Identities = 38/105 (36%), Positives = 59/105 (56%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A +F +P KD+V W+A+I ++Q G AL +F ++Q N T++ +LPA A
Sbjct: 143 ALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFAL 202
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
L+ ++ G +H +IK + TAL+ MYAKCG S A+ L
Sbjct: 203 LNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFL 247
>ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532132|gb|EEF33939.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 664
Score = 127 bits (318), Expect = 1e-27
Identities = 61/104 (58%), Positives = 81/104 (77%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
+KAKQ+F+G+ KD+VAWSAII A Q+ + +ALSLFR+MQN +AN +T++SVLPAC
Sbjct: 266 DKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDMQNDFLKANNVTLLSVLPAC 325
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQA 11
A+L ++ LGKSVH Y IK+D D+ GT+LVSMYAKCG F+ A
Sbjct: 326 ADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFNSA 369
Score = 68.9 bits (167), Expect = 4e-10
Identities = 34/87 (39%), Positives = 54/87 (62%)
Frame = -1
Query: 286 KDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAELSAINLGKSV 107
KD V+W+A+IA + ++ EA SLF +M+ + + N +T +SV PA A LSA+ G ++
Sbjct: 481 KDEVSWNALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMAL 540
Query: 106 HWYVIKSDIGLDVSTGTALVSMYAKCG 26
H +++ +V G L+ MYAKCG
Sbjct: 541 HACIMRMGFQSNVLVGNCLIDMYAKCG 567
Score = 68.6 bits (166), Expect = 5e-10
Identities = 35/97 (36%), Positives = 59/97 (60%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
AK +F+ +P++D+V W+A+I S + EAL L + MQ + +TI++++PA +
Sbjct: 68 AKGVFDKMPKRDVVTWNAMIFGLSHSVAPQEALKLVKSMQLAGQEPDFVTIVNLVPAVSR 127
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCG 26
L+ I+ +S+H YVI+ S G L+ MY+KCG
Sbjct: 128 LADIDACRSLHGYVIRRGFPAVFSNG--LIDMYSKCG 162
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/105 (32%), Positives = 58/105 (55%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A Q+FE + + ++W ++A ++ E L LF M+ N R N++++ S L A A+
Sbjct: 167 ACQVFELMQHTNDISWRTMMAGYAHNECFFEVLDLFDYMKKNNFRLNKVSVASALLAAAD 226
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
+ GK + + + I DVS TA+++MYAKCG +A+ L
Sbjct: 227 VRDSGRGKEICEFARQQGIDSDVSITTAMMTMYAKCGNLDKAKQL 271
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/105 (29%), Positives = 53/105 (50%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A +F +P +DIV +A+I +SQ G+ A+ +F +Q + T++ +L C
Sbjct: 369 ALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCIL 428
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
L + G +H +IK + +L+ MYAKCG + A+ L
Sbjct: 429 LHDLEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFL 473
>ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297327504|gb|EFH57924.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 836
Score = 109 bits (272), Expect = 3e-22
Identities = 52/102 (50%), Positives = 73/102 (71%)
Frame = -1
Query: 322 EKAKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPAC 143
E A+Q+F I +D+V+WSA+IA+F Q G EALSLFR+M + + N +T+ SVL C
Sbjct: 352 ELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGC 411
Query: 142 AELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFS 17
A ++A LGKS+H Y IK+D+ ++ T TA++SMYAKCG FS
Sbjct: 412 AGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFS 453
Score = 70.9 bits (172), Expect = 1e-10
Identities = 35/105 (33%), Positives = 61/105 (58%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A+ +FE + KD +W ++AA++ G+ E L LF M+N + R N++ S L A A
Sbjct: 253 AECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAY 312
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQIL 2
+ + G ++H Y ++ + D+S T+L++MY+KCG A+ L
Sbjct: 313 VGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQL 357
Score = 66.2 bits (160), Expect = 3e-09
Identities = 32/96 (33%), Positives = 59/96 (61%)
Frame = -1
Query: 316 AKQMFEGIPRKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACAE 137
A+Q+F+ +P KDIV W+ +++ +Q G S EAL LFR+M + + +++ +++PA ++
Sbjct: 154 ARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSK 213
Query: 136 LSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKC 29
L ++ + +H VIK G + + L+ MY KC
Sbjct: 214 LEKNDVCRCLHGLVIKK--GFTSAFSSGLIDMYCKC 247
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -1
Query: 316 AKQMFEGIP-RKDIVAWSAIIAAFSQTGNSVEALSLFREMQNGNNRANRITIMSVLPACA 140
AK +F+ K V+W+ ++ + G + EA++ FR+M+ + N +T ++++ A A
Sbjct: 556 AKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 139 ELSAINLGKSVHWYVIKSDIGLDVSTGTALVSMYAKCGFFSQAQ 8
EL+A++LG SVH +I+ G +LV MYAKCG ++
Sbjct: 616 ELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSK 659