BLASTX nr result

ID: Cimicifuga21_contig00041046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041046
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277711.2| PREDICTED: anaphase-promoting complex subuni...   107   1e-21
emb|CBI38557.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003577641.1| PREDICTED: anaphase-promoting complex subuni...   105   4e-21
ref|XP_003577640.1| PREDICTED: anaphase-promoting complex subuni...   105   4e-21
ref|XP_003572851.1| PREDICTED: anaphase-promoting complex subuni...   105   4e-21

>ref|XP_002277711.2| PREDICTED: anaphase-promoting complex subunit cdc20-like [Vitis
           vinifera]
          Length = 454

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +1

Query: 7   SSKIQLWDVQSSQLVRTLEGHQKRVGCLAWNDHMLTSGSQDMLIVNHDERVRESISC-LQ 183
           SSK+QLWD ++ +L+R+LEGH  RVG  AWN  +LTSGS+D  I+NHD R R S++C +Q
Sbjct: 200 SSKLQLWDAETFKLIRSLEGHDDRVGIAAWNGQILTSGSRDKSIINHDVRARNSLTCRVQ 259

Query: 184 AHKAEVCGLKWSGSGNQLASG 246
            H  EVCGLKWS +GN+LASG
Sbjct: 260 IHSQEVCGLKWSITGNKLASG 280


>emb|CBI38557.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
 Frame = +1

Query: 7   SSKIQLWDVQSSQLVRTLEGHQKRVGCLAWNDHMLTSGSQDMLIVNHDERVRESISC-LQ 183
           SSK+QLWD ++ +L+R+LEGH  RVG  AWN  +LTSGS+D  I+NHD R R S++C +Q
Sbjct: 201 SSKLQLWDAETFKLIRSLEGHDDRVGIAAWNGQILTSGSRDKSIINHDVRARNSLTCRVQ 260

Query: 184 AHKAEVCGLKWSGSGNQLASG 246
            H  EVCGLKWS +GN+LASG
Sbjct: 261 IHSQEVCGLKWSITGNKLASG 281


>ref|XP_003577641.1| PREDICTED: anaphase-promoting complex subunit cdc20-like isoform 2
           [Brachypodium distachyon]
          Length = 474

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/84 (61%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1   LNSSKIQLWDVQSSQLVRTLEG-HQKRVGCLAWNDHMLTSGSQDMLIVNHDERVRE-SIS 174
           LNSS IQLWD  SS+L+RTL+G H+ RVG LAWN+++LT+G  D  IVN+D R+R+ ++ 
Sbjct: 215 LNSSDIQLWDTSSSRLLRTLKGVHESRVGSLAWNNNILTTGGMDGRIVNNDVRIRDHAVQ 274

Query: 175 CLQAHKAEVCGLKWSGSGNQLASG 246
             Q H  EVCGLKWSGSG QLASG
Sbjct: 275 TYQGHSQEVCGLKWSGSGQQLASG 298


>ref|XP_003577640.1| PREDICTED: anaphase-promoting complex subunit cdc20-like isoform 1
           [Brachypodium distachyon]
          Length = 468

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/84 (61%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1   LNSSKIQLWDVQSSQLVRTLEG-HQKRVGCLAWNDHMLTSGSQDMLIVNHDERVRE-SIS 174
           LNSS IQLWD  SS+L+RTL+G H+ RVG LAWN+++LT+G  D  IVN+D R+R+ ++ 
Sbjct: 209 LNSSDIQLWDTSSSRLLRTLKGVHESRVGSLAWNNNILTTGGMDGRIVNNDVRIRDHAVQ 268

Query: 175 CLQAHKAEVCGLKWSGSGNQLASG 246
             Q H  EVCGLKWSGSG QLASG
Sbjct: 269 TYQGHSQEVCGLKWSGSGQQLASG 292


>ref|XP_003572851.1| PREDICTED: anaphase-promoting complex subunit cdc20-like, partial
           [Brachypodium distachyon]
          Length = 508

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/84 (61%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1   LNSSKIQLWDVQSSQLVRTLEG-HQKRVGCLAWNDHMLTSGSQDMLIVNHDERVRE-SIS 174
           LNSS IQLWD  SS+L+RTL+G H+ RVG LAWN+++LT+G  D  IVN+D R+R+ ++ 
Sbjct: 248 LNSSDIQLWDTSSSRLLRTLKGVHESRVGSLAWNNNILTTGGMDGRIVNNDVRIRDHAVQ 307

Query: 175 CLQAHKAEVCGLKWSGSGNQLASG 246
             Q H  EVCGLKWSGSG QLASG
Sbjct: 308 TYQGHSQEVCGLKWSGSGQQLASG 331


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