BLASTX nr result

ID: Cimicifuga21_contig00040843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040843
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   5e-20
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    99   3e-19
gb|ABA98911.1| retrotransposon protein, putative, unclassified, ...    97   1e-18
gb|EEE53388.1| hypothetical protein OsJ_36435 [Oryza sativa Japo...    97   1e-18
gb|EEC69465.1| hypothetical protein OsI_38661 [Oryza sativa Indi...    97   1e-18

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/110 (41%), Positives = 72/110 (65%)
 Frame = -1

Query: 335  EKYLGAPLVLNRNTTVDFQAITSRVLDRMNGWRAKFLSQARKVILI*AVTSVIPSHLMSI 156
            EKYLG P ++ R+  V F  I  R+  ++ GW+ K LS+  K +LI +V   IP+++MS+
Sbjct: 751  EKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSV 810

Query: 155  FKLPTHTCEKLDSVNATFFWGKTKNNTRKTHFISWEKIC*PKTLGGLGTR 6
            F LP+   +++ S+ A F+WG +  N RK H+ SW+ +C PK++GGLG R
Sbjct: 811  FSLPSGLIDEIHSLLARFWWGSSDTN-RKMHWHSWDTLCYPKSMGGLGFR 859


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/108 (41%), Positives = 71/108 (65%)
 Frame = -1

Query: 335  EKYLGAPLVLNRNTTVDFQAITSRVLDRMNGWRAKFLSQARKVILI*AVTSVIPSHLMSI 156
            +KYLG P +  R+  V F+ +  R+  ++ GW+ K LS+A K +LI AV   +P++LM +
Sbjct: 755  QKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGV 814

Query: 155  FKLPTHTCEKLDSVNATFFWGKTKNNTRKTHFISWEKIC*PKTLGGLG 12
            +KLP    +++ S  A F+WG  K + RK H++SWEK+C PK +GG+G
Sbjct: 815  YKLPVAVIQEIHSAMARFWWG-GKGDERKMHWLSWEKMCKPKCMGGMG 861


>gb|ABA98911.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 589

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = -1

Query: 332 KYLGAPLVLNRNTTVDFQAITSRVLDRMNGWRAKFLSQARKVILI*AVTSVIPSHLMSIF 153
           KYLG P    R +   F++I+ R+  RMN W  KF+S   K +LI +V   IP+++M +F
Sbjct: 191 KYLGLPTPEGRMSADRFKSISERLAKRMNSWSEKFMSSGAKEVLIKSVAQAIPTYMMGVF 250

Query: 152 KLPTHTCEKLDSVNATFFWGKTKNNTRKTHFISWEKIC*PKTLGGLGTR 6
           KLP  TC+    +   F+WG  +N  RK H+I+WE +  PK LGGLG R
Sbjct: 251 KLPASTCDVYTKMIRDFWWGDDENK-RKVHWIAWENLVLPKGLGGLGFR 298


>gb|EEE53388.1| hypothetical protein OsJ_36435 [Oryza sativa Japonica Group]
          Length = 740

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = -1

Query: 332 KYLGAPLVLNRNTTVDFQAITSRVLDRMNGWRAKFLSQARKVILI*AVTSVIPSHLMSIF 153
           KYLG P    R +   F++I+ R+  RMN W  KF+S   K +LI +V   IP+++M +F
Sbjct: 191 KYLGLPTPEGRMSADRFKSISERLAKRMNSWSEKFMSSGAKEVLIKSVAQAIPTYMMGVF 250

Query: 152 KLPTHTCEKLDSVNATFFWGKTKNNTRKTHFISWEKIC*PKTLGGLGTR 6
           KLP  TC+    +   F+WG  +N  RK H+I+WE +  PK LGGLG R
Sbjct: 251 KLPASTCDVYTKMIRDFWWGDDENK-RKVHWIAWENLVLPKGLGGLGFR 298


>gb|EEC69465.1| hypothetical protein OsI_38661 [Oryza sativa Indica Group]
          Length = 725

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = -1

Query: 332 KYLGAPLVLNRNTTVDFQAITSRVLDRMNGWRAKFLSQARKVILI*AVTSVIPSHLMSIF 153
           KYLG P    R +   F++I+ R+  RMN W  KF+S   K +LI +V   IP+++M +F
Sbjct: 176 KYLGLPTPEGRMSADRFKSISERLAKRMNSWSEKFMSSGAKEVLIKSVAQAIPTYMMGVF 235

Query: 152 KLPTHTCEKLDSVNATFFWGKTKNNTRKTHFISWEKIC*PKTLGGLGTR 6
           KLP  TC+    +   F+WG  +N  RK H+I+WE +  PK LGGLG R
Sbjct: 236 KLPASTCDVYTKMIRDFWWGDDENK-RKVHWIAWENLVLPKGLGGLGFR 283


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