BLASTX nr result

ID: Cimicifuga21_contig00040402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040402
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD13304.1| polyprotein [Solanum lycopersicum]                      75   2e-14
emb|CAN65836.1| hypothetical protein VITISV_025816 [Vitis vinifera]    76   3e-14
emb|CAN69225.1| hypothetical protein VITISV_004699 [Vitis vinifera]    69   3e-13
emb|CAN79373.1| hypothetical protein VITISV_028502 [Vitis vinifera]    78   7e-13
emb|CAN68329.1| hypothetical protein VITISV_030159 [Vitis vinifera]    77   1e-12

>gb|AAD13304.1| polyprotein [Solanum lycopersicum]
          Length = 1542

 Score = 75.5 bits (184), Expect(2) = 2e-14
 Identities = 38/72 (52%), Positives = 51/72 (70%)
 Frame = +2

Query: 74  DNLKKELKHQFLSENVDYLARKKLCALKQLGTVHEYIKEFMACILDIRNMSEHDRLFCFT 253
           D L KE++ QFL  N  +LAR KL  L+Q G+V EYIKEF + +LDI+NMS+ D+L  F 
Sbjct: 183 DKLIKEMRDQFLPSNASWLARDKLKRLRQTGSVREYIKEFTSVMLDIQNMSDEDKLHNFI 242

Query: 254 DGLKFSAQDELR 289
            G++  AQ+ELR
Sbjct: 243 SGMQGWAQNELR 254



 Score = 28.1 bits (61), Expect(2) = 2e-14
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 6   DAKLWWRTKTA-NMEQGPITINRW 74
           DAKLWWRT+ A ++  G   I+ W
Sbjct: 159 DAKLWWRTRNADDVSAGRPRIDTW 182


>emb|CAN65836.1| hypothetical protein VITISV_025816 [Vitis vinifera]
          Length = 1193

 Score = 76.3 bits (186), Expect(2) = 3e-14
 Identities = 39/72 (54%), Positives = 51/72 (70%)
 Frame = +2

Query: 74  DNLKKELKHQFLSENVDYLARKKLCALKQLGTVHEYIKEFMACILDIRNMSEHDRLFCFT 253
           + LKKELK QFL  N  ++AR+ L  L+  G+V EY+KEF + +LDI+NMSE D+LF F 
Sbjct: 166 ETLKKELKDQFLPTNTAWVAREALKRLRHTGSVREYVKEFNSLMLDIKNMSEKDKLFNFM 225

Query: 254 DGLKFSAQDELR 289
            GL+  AQ ELR
Sbjct: 226 SGLQGWAQTELR 237



 Score = 26.6 bits (57), Expect(2) = 3e-14
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = +3

Query: 6   DAKLWWRTKT---ANMEQGPIT 62
           DAKLWWRTK    A  E+  IT
Sbjct: 142 DAKLWWRTKVEDDAESERPQIT 163


>emb|CAN69225.1| hypothetical protein VITISV_004699 [Vitis vinifera]
          Length = 533

 Score = 69.3 bits (168), Expect(2) = 3e-13
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = +2

Query: 83  KKELKHQFLSENVDYLARKKLCALKQLGTVHEYIKEFMACILDIRNMSEHDRLFCFTDGL 262
           K+E+K QF  ++V YLARK +  LK +G++ +Y+KEF + +L+I NM+E + LF F D L
Sbjct: 202 KREIKRQFYPDDVAYLARKNMRCLKHIGSIRDYVKEFSSLMLEIPNMTEEELLFNFMDNL 261

Query: 263 KFSAQDELR 289
           +  A+ ELR
Sbjct: 262 QGWAEQELR 270



 Score = 30.4 bits (67), Expect(2) = 3e-13
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 15  LWWRTKTANMEQGPITINRWTI*RKN*NTSFY 110
           LWWR +  +ME+G  TI  W   ++     FY
Sbjct: 179 LWWRRRFVDMEKGICTIETWXEFKREIKRQFY 210


>emb|CAN79373.1| hypothetical protein VITISV_028502 [Vitis vinifera]
          Length = 1439

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/72 (55%), Positives = 51/72 (70%)
 Frame = +2

Query: 74  DNLKKELKHQFLSENVDYLARKKLCALKQLGTVHEYIKEFMACILDIRNMSEHDRLFCFT 253
           + LKKELK QFL  N  ++AR+ L  LK  G+V EY+KEF + +LDI+NMSE D+LF F 
Sbjct: 152 ETLKKELKDQFLPTNTAWVAREALKRLKHTGSVREYVKEFSSLMLDIKNMSEEDKLFNFM 211

Query: 254 DGLKFSAQDELR 289
            GL+  AQ ELR
Sbjct: 212 SGLQGWAQTELR 223


>emb|CAN68329.1| hypothetical protein VITISV_030159 [Vitis vinifera]
          Length = 1330

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/72 (55%), Positives = 51/72 (70%)
 Frame = +2

Query: 74  DNLKKELKHQFLSENVDYLARKKLCALKQLGTVHEYIKEFMACILDIRNMSEHDRLFCFT 253
           + LKKELK QFL  N  ++AR+ L  L+  GTV EY+KEF + +LDI+NMSE D+LF F 
Sbjct: 151 ETLKKELKDQFLPINTAWVAREALKRLRHTGTVREYVKEFSSLMLDIKNMSEEDKLFNFM 210

Query: 254 DGLKFSAQDELR 289
            GL+  AQ ELR
Sbjct: 211 SGLQGWAQMELR 222


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