BLASTX nr result
ID: Cimicifuga21_contig00040359
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00040359 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30660.3| unnamed protein product [Vitis vinifera] 140 1e-31 ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 140 1e-31 ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containi... 132 2e-29 ref|XP_004149063.1| PREDICTED: pentatricopeptide repeat-containi... 132 2e-29 gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana] 127 9e-28 >emb|CBI30660.3| unnamed protein product [Vitis vinifera] Length = 598 Score = 140 bits (352), Expect = 1e-31 Identities = 66/90 (73%), Positives = 77/90 (85%) Frame = +2 Query: 2 GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181 GR++DARR+FD+M KNVFSWTSMIDGYGKNGN NEAL LF M+ V+PN VTFLSA Sbjct: 331 GRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLSA 390 Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271 LSACGHAGLV +GWTI +SMERD+++KPRM Sbjct: 391 LSACGHAGLVAKGWTILESMERDYLLKPRM 420 >ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Vitis vinifera] Length = 533 Score = 140 bits (352), Expect = 1e-31 Identities = 66/90 (73%), Positives = 77/90 (85%) Frame = +2 Query: 2 GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181 GR++DARR+FD+M KNVFSWTSMIDGYGKNGN NEAL LF M+ V+PN VTFLSA Sbjct: 331 GRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLSA 390 Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271 LSACGHAGLV +GWTI +SMERD+++KPRM Sbjct: 391 LSACGHAGLVAKGWTILESMERDYLLKPRM 420 >ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like [Cucumis sativus] Length = 523 Score = 132 bits (333), Expect = 2e-29 Identities = 61/90 (67%), Positives = 74/90 (82%) Frame = +2 Query: 2 GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181 GR DDAR++FD M+ +NVFSWTSMIDGYGKNG P+EAL LF M+ +++PN VTFLSA Sbjct: 321 GRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALELFCIMQEKHQIQPNFVTFLSA 380 Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271 LSAC H GLV EGW IF+SMERD+ +KP+M Sbjct: 381 LSACAHGGLVEEGWEIFESMERDYSLKPKM 410 >ref|XP_004149063.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like [Cucumis sativus] Length = 523 Score = 132 bits (333), Expect = 2e-29 Identities = 61/90 (67%), Positives = 74/90 (82%) Frame = +2 Query: 2 GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181 GR DDAR++FD M+ +NVFSWTSMIDGYGKNG P+EAL LF M+ +++PN VTFLSA Sbjct: 321 GRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALELFCIMQEKHQIQPNFVTFLSA 380 Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271 LSAC H GLV EGW IF+SMERD+ +KP+M Sbjct: 381 LSACAHGGLVEEGWEIFESMERDYSLKPKM 410 >gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana] Length = 841 Score = 127 bits (319), Expect = 9e-28 Identities = 60/90 (66%), Positives = 75/90 (83%) Frame = +2 Query: 2 GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181 G ++DARR+FD M+ KNVFSWTSMIDGYGKNGNP EAL LF M+ R+EPN VTFL A Sbjct: 643 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE-FRIEPNYVTFLGA 701 Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271 LSAC H+GLV++G+ IF+SM+RD+ +KP+M Sbjct: 702 LSACSHSGLVDKGYEIFESMQRDYSMKPKM 731