BLASTX nr result

ID: Cimicifuga21_contig00040359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00040359
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30660.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_004149063.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana]              127   9e-28

>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/90 (73%), Positives = 77/90 (85%)
 Frame = +2

Query: 2   GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181
           GR++DARR+FD+M  KNVFSWTSMIDGYGKNGN NEAL LF  M+    V+PN VTFLSA
Sbjct: 331 GRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLSA 390

Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271
           LSACGHAGLV +GWTI +SMERD+++KPRM
Sbjct: 391 LSACGHAGLVAKGWTILESMERDYLLKPRM 420


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/90 (73%), Positives = 77/90 (85%)
 Frame = +2

Query: 2   GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181
           GR++DARR+FD+M  KNVFSWTSMIDGYGKNGN NEAL LF  M+    V+PN VTFLSA
Sbjct: 331 GRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLSA 390

Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271
           LSACGHAGLV +GWTI +SMERD+++KPRM
Sbjct: 391 LSACGHAGLVAKGWTILESMERDYLLKPRM 420


>ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Cucumis sativus]
          Length = 523

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/90 (67%), Positives = 74/90 (82%)
 Frame = +2

Query: 2   GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181
           GR DDAR++FD M+ +NVFSWTSMIDGYGKNG P+EAL LF  M+   +++PN VTFLSA
Sbjct: 321 GRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALELFCIMQEKHQIQPNFVTFLSA 380

Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271
           LSAC H GLV EGW IF+SMERD+ +KP+M
Sbjct: 381 LSACAHGGLVEEGWEIFESMERDYSLKPKM 410


>ref|XP_004149063.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Cucumis sativus]
          Length = 523

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/90 (67%), Positives = 74/90 (82%)
 Frame = +2

Query: 2   GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181
           GR DDAR++FD M+ +NVFSWTSMIDGYGKNG P+EAL LF  M+   +++PN VTFLSA
Sbjct: 321 GRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALELFCIMQEKHQIQPNFVTFLSA 380

Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271
           LSAC H GLV EGW IF+SMERD+ +KP+M
Sbjct: 381 LSACAHGGLVEEGWEIFESMERDYSLKPKM 410


>gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana]
          Length = 841

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/90 (66%), Positives = 75/90 (83%)
 Frame = +2

Query: 2   GRVDDARRIFDNMRIKNVFSWTSMIDGYGKNGNPNEALCLFDTMRRGSRVEPNNVTFLSA 181
           G ++DARR+FD M+ KNVFSWTSMIDGYGKNGNP EAL LF  M+   R+EPN VTFL A
Sbjct: 643 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE-FRIEPNYVTFLGA 701

Query: 182 LSACGHAGLVNEGWTIFKSMERDHMIKPRM 271
           LSAC H+GLV++G+ IF+SM+RD+ +KP+M
Sbjct: 702 LSACSHSGLVDKGYEIFESMQRDYSMKPKM 731


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